RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 FAM184AQ8NB25 1140 aa17.74■□□□□ 0.43
UBXN11-213ENST00000472155 COL22A1Q8NFW1 1626 aaPredicted RBP17.74■□□□□ 0.43
UBXN11-213ENST00000472155 AP5Z1O43299 807 aa17.73■□□□□ 0.43
UBXN11-213ENST00000472155 HMGB1P09429 215 aaKnown RBP17.73■□□□□ 0.43
UBXN11-213ENST00000472155 FDPSP14324 419 aaKnown RBP17.73■□□□□ 0.43
UBXN11-213ENST00000472155 CKAP2LQ8IYA6 745 aa17.73■□□□□ 0.43
UBXN11-213ENST00000472155 MYH7P12883 1935 aa17.73■□□□□ 0.43
UBXN11-213ENST00000472155 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.73■□□□□ 0.43
UBXN11-213ENST00000472155 PHF14O94880 888 aa17.73■□□□□ 0.43
UBXN11-213ENST00000472155 DACT1Q9NYF0 836 aa17.73■□□□□ 0.43
UBXN11-213ENST00000472155 TAOK2Q9UL54 1235 aa17.73■□□□□ 0.43
UBXN11-213ENST00000472155 ZNF532Q9HCE3 1301 aa17.73■□□□□ 0.43
UBXN11-213ENST00000472155 ADD1P35611 737 aaKnown RBP17.72■□□□□ 0.43
UBXN11-213ENST00000472155 TBC1D10CQ8IV04 446 aa17.72■□□□□ 0.43
UBXN11-213ENST00000472155 SENP2Q9HC62 589 aa17.72■□□□□ 0.43
UBXN11-213ENST00000472155 PRC1O43663 620 aa17.72■□□□□ 0.43
UBXN11-213ENST00000472155 FGFR2P21802 821 aa17.72■□□□□ 0.43
UBXN11-213ENST00000472155 MB21D2Q8IYB1 491 aaPredicted RBP17.72■□□□□ 0.43
UBXN11-213ENST00000472155 NR1I2O75469 434 aa17.71■□□□□ 0.43
UBXN11-213ENST00000472155 ZFYP08048 801 aaPredicted RBP17.71■□□□□ 0.43
UBXN11-213ENST00000472155 RASGRF1Q13972 1273 aa17.71■□□□□ 0.43
UBXN11-213ENST00000472155 IMMTQ16891 758 aaKnown RBP17.71■□□□□ 0.43
UBXN11-213ENST00000472155 C3orf67Q6ZVT6 689 aa17.71■□□□□ 0.43
UBXN11-213ENST00000472155 ILDR1Q86SU0 546 aaPredicted RBP17.71■□□□□ 0.43
UBXN11-213ENST00000472155 IQSEC3Q9UPP2 1182 aaPredicted RBP17.71■□□□□ 0.43
UBXN11-213ENST00000472155 NIP7Q9Y221 180 aaKnown RBP eCLIP17.71■□□□□ 0.43
UBXN11-213ENST00000472155 SALL1Q9NSC2 1324 aa17.71■□□□□ 0.43
UBXN11-213ENST00000472155 RXRAP19793 462 aa17.71■□□□□ 0.43
UBXN11-213ENST00000472155 HPS5Q9UPZ3 1129 aa17.71■□□□□ 0.43
UBXN11-213ENST00000472155 PDE6AP16499 860 aa17.7■□□□□ 0.42
UBXN11-213ENST00000472155 BCAMP50895 628 aa17.7■□□□□ 0.42
UBXN11-213ENST00000472155 TAF1P21675 1872 aa17.7■□□□□ 0.42
UBXN11-213ENST00000472155 SPATA31A5Q5VU36 1347 aa17.7■□□□□ 0.42
UBXN11-213ENST00000472155 SPATA31A7Q8IWB4 1347 aa17.7■□□□□ 0.42
UBXN11-213ENST00000472155 KDM4AO75164 1064 aa17.7■□□□□ 0.42
UBXN11-213ENST00000472155 APPP05067 770 aa17.7■□□□□ 0.42
UBXN11-213ENST00000472155 ZNF830Q96NB3 372 aaPredicted RBP17.7■□□□□ 0.42
UBXN11-213ENST00000472155 TACC3Q9Y6A5 838 aa17.7■□□□□ 0.42
UBXN11-213ENST00000472155 NRAPQ86VF7 1730 aa17.7■□□□□ 0.42
UBXN11-213ENST00000472155 ELP1O95163 1332 aa17.7■□□□□ 0.42
UBXN11-213ENST00000472155 KLF18A0A0U1RQI7 1052 aa17.69■□□□□ 0.42
UBXN11-213ENST00000472155 TCRBV5S4A2TA0A5A2 114 aa17.69■□□□□ 0.42
UBXN11-213ENST00000472155 PLCB2Q00722 1185 aa17.69■□□□□ 0.42
UBXN11-213ENST00000472155 PUM3Q15397 648 aaKnown RBP17.69■□□□□ 0.42
UBXN11-213ENST00000472155 FAM98CQ17RN3 349 aaKnown RBP17.69■□□□□ 0.42
UBXN11-213ENST00000472155 CSPP1Q1MSJ5 1256 aa17.69■□□□□ 0.42
UBXN11-213ENST00000472155 CYB5R4Q7L1T6 521 aa17.69■□□□□ 0.42
UBXN11-213ENST00000472155 UTP14AQ9BVJ6 771 aaKnown RBP17.69■□□□□ 0.42
UBXN11-213ENST00000472155 ZNF213O14771 459 aa17.69■□□□□ 0.42
UBXN11-213ENST00000472155 NTSR2O95665 410 aa17.69■□□□□ 0.42
UBXN11-213ENST00000472155 ARID4AP29374 1257 aaPredicted RBP17.69■□□□□ 0.42
UBXN11-213ENST00000472155 FAM182BQ5T319 152 aa17.68■□□□□ 0.42
UBXN11-213ENST00000472155 STK11IPQ8N1F8 1099 aa17.68■□□□□ 0.42
UBXN11-213ENST00000472155 LPIN2Q92539 896 aa17.68■□□□□ 0.42
UBXN11-213ENST00000472155 NAP1L5Q96NT1 182 aaPredicted RBP17.68■□□□□ 0.42
UBXN11-213ENST00000472155 USP28Q96RU2 1077 aa17.68■□□□□ 0.42
UBXN11-213ENST00000472155 SCAND2PQ9GZW5 306 aaPredicted RBP17.68■□□□□ 0.42
UBXN11-213ENST00000472155 PHLPP1O60346 1717 aa17.68■□□□□ 0.42
UBXN11-213ENST00000472155 A0A087WWV3 80 aa17.68■□□□□ 0.42
UBXN11-213ENST00000472155 ZNF274Q96GC6 653 aaPredicted RBP17.68■□□□□ 0.42
UBXN11-213ENST00000472155 MPHOSPH8Q99549 860 aa17.68■□□□□ 0.42
UBXN11-213ENST00000472155 LLPHQ9BRT6 129 aaKnown RBP17.68■□□□□ 0.42
UBXN11-213ENST00000472155 CTNNA3Q9UI47 895 aa17.68■□□□□ 0.42
UBXN11-213ENST00000472155 NOL7Q9UMY1 257 aaKnown RBP17.68■□□□□ 0.42
UBXN11-213ENST00000472155 CARMIL3Q8ND23 1372 aa17.68■□□□□ 0.42
UBXN11-213ENST00000472155 GOLGA8BA8MQT2 603 aa17.68■□□□□ 0.42
UBXN11-213ENST00000472155 PRKAB2O43741 272 aa17.68■□□□□ 0.42
UBXN11-213ENST00000472155 SPATA5Q8NB90 893 aa17.68■□□□□ 0.42
UBXN11-213ENST00000472155 EPB41L4AQ9HCS5 686 aaPredicted RBP17.68■□□□□ 0.42
UBXN11-213ENST00000472155 GOLGB1Q14789 3259 aaKnown RBP17.67■□□□□ 0.42
UBXN11-213ENST00000472155 ADCY5O95622 1261 aa17.67■□□□□ 0.42
UBXN11-213ENST00000472155 BICDL1Q6ZP65 573 aa17.67■□□□□ 0.42
UBXN11-213ENST00000472155 MAGEB6Q8N7X4 407 aa17.67■□□□□ 0.42
UBXN11-213ENST00000472155 BICD2Q8TD16 824 aa17.67■□□□□ 0.42
UBXN11-213ENST00000472155 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.67■□□□□ 0.421e-6■■■■■ 38.5
UBXN11-213ENST00000472155 NUP62CLQ9H1M0 184 aa17.67■□□□□ 0.42
UBXN11-213ENST00000472155 DDX60Q8IY21 1712 aaKnown RBP17.67■□□□□ 0.42
UBXN11-213ENST00000472155 GOLGA6L4A6NEF3 574 aa17.67■□□□□ 0.42
UBXN11-213ENST00000472155 UBE2Q2LH0YL09 131 aa17.67■□□□□ 0.42
UBXN11-213ENST00000472155 SMIM22K7EJ46 135 aa17.67■□□□□ 0.42
UBXN11-213ENST00000472155 MSNP26038 577 aaKnown RBP17.67■□□□□ 0.42
UBXN11-213ENST00000472155 CCDC24Q8N4L8 307 aa17.67■□□□□ 0.42
UBXN11-213ENST00000472155 LINC00116Q8NCU8 138 aa17.67■□□□□ 0.42
UBXN11-213ENST00000472155 AIFM3Q96NN9 605 aa17.67■□□□□ 0.42
UBXN11-213ENST00000472155 ARMT1Q9H993 441 aa17.67■□□□□ 0.42
UBXN11-213ENST00000472155 MCM5P33992 734 aa17.66■□□□□ 0.42
UBXN11-213ENST00000472155 LRRFIP1Q32MZ4 808 aaKnown RBP17.66■□□□□ 0.42
UBXN11-213ENST00000472155 CCDC144CPQ8IYA2 1237 aa17.66■□□□□ 0.42
UBXN11-213ENST00000472155 NCOA7Q8NI08 942 aa17.66■□□□□ 0.42
UBXN11-213ENST00000472155 ZNF512BQ96KM6 892 aaPredicted RBP17.66■□□□□ 0.42
UBXN11-213ENST00000472155 GOLPH3LQ9H4A5 285 aa17.66■□□□□ 0.42
UBXN11-213ENST00000472155 LRP5O75197 1615 aa17.66■□□□□ 0.42
UBXN11-213ENST00000472155 LTBP4Q8N2S1 1624 aa17.66■□□□□ 0.42
UBXN11-213ENST00000472155 NEDD4P46934 1319 aa17.66■□□□□ 0.42
UBXN11-213ENST00000472155 MROH5Q6ZUA9 1318 aa17.66■□□□□ 0.42
UBXN11-213ENST00000472155 B4E1Z4 1266 aa17.66■□□□□ 0.42
UBXN11-213ENST00000472155 CTDSPL2Q05D32 466 aa17.66■□□□□ 0.42
UBXN11-213ENST00000472155 TICAM2Q86XR7 235 aa17.66■□□□□ 0.42
UBXN11-213ENST00000472155 STRBPQ96SI9 672 aaKnown RBP17.66■□□□□ 0.42
UBXN11-213ENST00000472155 MRVI1Q9Y6F6 885 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms