RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 FGD1P98174 961 aa20.51■□□□□ 0.87
RRP1-202ENST00000471909 DNM1Q05193 864 aaKnown RBP20.51■□□□□ 0.87
RRP1-202ENST00000471909 CDC37L1Q7L3B6 337 aa20.51■□□□□ 0.87
RRP1-202ENST00000471909 PTF1AQ7RTS3 328 aa20.51■□□□□ 0.87
RRP1-202ENST00000471909 MPHOSPH8Q99549 860 aa20.51■□□□□ 0.87
RRP1-202ENST00000471909 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.51■□□□□ 0.874e-7■■■□□ 18.4
RRP1-202ENST00000471909 PIH1D3Q9NQM4 214 aaKnown RBP20.51■□□□□ 0.87
RRP1-202ENST00000471909 PDIA4P13667 645 aaKnown RBP20.51■□□□□ 0.87
RRP1-202ENST00000471909 CCDC152Q4G0S7 254 aa20.51■□□□□ 0.87
RRP1-202ENST00000471909 AGXT2Q9BYV1 514 aa20.51■□□□□ 0.87
RRP1-202ENST00000471909 JAK2O60674 1132 aa20.5■□□□□ 0.87
RRP1-202ENST00000471909 FGAP02671 866 aa20.5■□□□□ 0.87
RRP1-202ENST00000471909 ADD2P35612 726 aa20.5■□□□□ 0.87
RRP1-202ENST00000471909 TTF1Q15361 905 aaPredicted RBP20.5■□□□□ 0.87
RRP1-202ENST00000471909 CTNNA3Q9UI47 895 aa20.5■□□□□ 0.87
RRP1-202ENST00000471909 TCHHQ07283 1943 aa20.5■□□□□ 0.87
RRP1-202ENST00000471909 GPAA1O43292 621 aa20.5■□□□□ 0.87
RRP1-202ENST00000471909 SLC9C2Q5TAH2 1124 aa20.5■□□□□ 0.87
RRP1-202ENST00000471909 ZNF652Q9Y2D9 606 aa20.5■□□□□ 0.87
RRP1-202ENST00000471909 FIBPO43427 364 aa20.49■□□□□ 0.87
RRP1-202ENST00000471909 UQCRFS1P1P0C7P4 283 aa20.49■□□□□ 0.87
RRP1-202ENST00000471909 SCRN1Q12765 414 aa20.49■□□□□ 0.87
RRP1-202ENST00000471909 FNBP4Q8N3X1 1017 aaPredicted RBP20.49■□□□□ 0.87
RRP1-202ENST00000471909 COL5A3P25940 1745 aaPredicted RBP20.49■□□□□ 0.87
RRP1-202ENST00000471909 ZSCAN25Q6NSZ9 544 aa20.49■□□□□ 0.87
RRP1-202ENST00000471909 CLEC4GQ6UXB4 293 aa20.49■□□□□ 0.87
RRP1-202ENST00000471909 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.49■□□□□ 0.87
RRP1-202ENST00000471909 RTL9Q8NET4 1388 aa20.48■□□□□ 0.87
RRP1-202ENST00000471909 DDX60Q8IY21 1712 aaKnown RBP20.48■□□□□ 0.87
RRP1-202ENST00000471909 LAMA4Q16363 1823 aa20.48■□□□□ 0.87
RRP1-202ENST00000471909 PFKFB2O60825 505 aa20.48■□□□□ 0.87
RRP1-202ENST00000471909 IDH1O75874 414 aaKnown RBP20.48■□□□□ 0.87
RRP1-202ENST00000471909 SLC5A1P13866 664 aa20.48■□□□□ 0.87
RRP1-202ENST00000471909 HAND2P61296 217 aa20.48■□□□□ 0.87
RRP1-202ENST00000471909 APOBRQ0VD83 1088 aa20.48■□□□□ 0.87
RRP1-202ENST00000471909 CHST3Q7LGC8 479 aa20.48■□□□□ 0.87
RRP1-202ENST00000471909 IMMTQ16891 758 aaKnown RBP20.48■□□□□ 0.87
RRP1-202ENST00000471909 FERMT3Q86UX7 667 aa20.48■□□□□ 0.87
RRP1-202ENST00000471909 FAM184AQ8NB25 1140 aa20.47■□□□□ 0.87
RRP1-202ENST00000471909 IGHMBP2P38935 993 aaKnown RBP20.47■□□□□ 0.87
RRP1-202ENST00000471909 UBE2HP62256 183 aa20.47■□□□□ 0.87
RRP1-202ENST00000471909 UBE3CQ15386 1083 aa20.47■□□□□ 0.87
RRP1-202ENST00000471909 SMIM5Q71RC9 77 aa20.46■□□□□ 0.87
RRP1-202ENST00000471909 ATRNO75882 1429 aa20.46■□□□□ 0.87
RRP1-202ENST00000471909 RASGRF1Q13972 1273 aa20.46■□□□□ 0.87
RRP1-202ENST00000471909 SPATA5Q8NB90 893 aa20.46■□□□□ 0.87
RRP1-202ENST00000471909 WWC3Q9ULE0 1092 aa20.46■□□□□ 0.87
RRP1-202ENST00000471909 ZNF831Q5JPB2 1677 aa20.45■□□□□ 0.86
RRP1-202ENST00000471909 ZNF532Q9HCE3 1301 aa20.45■□□□□ 0.86
RRP1-202ENST00000471909 PDE6AP16499 860 aa20.45■□□□□ 0.86
RRP1-202ENST00000471909 FAM173BQ6P4H8 233 aa20.45■□□□□ 0.86
RRP1-202ENST00000471909 SMARCC2Q8TAQ2 1214 aa20.45■□□□□ 0.86
RRP1-202ENST00000471909 CNTNAP4Q9C0A0 1308 aa20.45■□□□□ 0.86
RRP1-202ENST00000471909 TCRBV5S4A2TA0A5A2 114 aa20.45■□□□□ 0.86
RRP1-202ENST00000471909 UVSSAQ2YD98 709 aa20.45■□□□□ 0.86
RRP1-202ENST00000471909 ERFEQ4G0M1 354 aa20.45■□□□□ 0.86
RRP1-202ENST00000471909 DNTTIP2Q5QJE6 756 aaKnown RBP20.45■□□□□ 0.86
RRP1-202ENST00000471909 DDX11Q96FC9 970 aa20.45■□□□□ 0.86
RRP1-202ENST00000471909 LLPHQ9BRT6 129 aaKnown RBP20.45■□□□□ 0.86
RRP1-202ENST00000471909 PODXL2Q9NZ53 605 aa20.45■□□□□ 0.86
RRP1-202ENST00000471909 FBXL16Q8N461 479 aa20.44■□□□□ 0.86
RRP1-202ENST00000471909 USP21Q9UK80 565 aa20.44■□□□□ 0.86
RRP1-202ENST00000471909 BCORQ6W2J9 1755 aa20.44■□□□□ 0.86
RRP1-202ENST00000471909 MYH7P12883 1935 aa20.44■□□□□ 0.86
RRP1-202ENST00000471909 ARAP2Q8WZ64 1704 aa20.44■□□□□ 0.86
RRP1-202ENST00000471909 CTDNEP1O95476 244 aa20.44■□□□□ 0.86
RRP1-202ENST00000471909 TPRNQ4KMQ1 711 aa20.44■□□□□ 0.86
RRP1-202ENST00000471909 C3orf67Q6ZVT6 689 aa20.44■□□□□ 0.86
RRP1-202ENST00000471909 NSUN7Q8NE18 718 aaKnown RBP20.44■□□□□ 0.86
RRP1-202ENST00000471909 PDIA3P30101 505 aaKnown RBP20.43■□□□□ 0.86
RRP1-202ENST00000471909 CCT2P78371 535 aaKnown RBP20.43■□□□□ 0.86
RRP1-202ENST00000471909 CHRNDQ07001 517 aa20.43■□□□□ 0.86
RRP1-202ENST00000471909 GPHNQ9NQX3 736 aaPredicted RBP20.43■□□□□ 0.86
RRP1-202ENST00000471909 ZNF213O14771 459 aa20.43■□□□□ 0.86
RRP1-202ENST00000471909 BCAMP50895 628 aa20.43■□□□□ 0.86
RRP1-202ENST00000471909 ZNF274Q96GC6 653 aaPredicted RBP20.43■□□□□ 0.86
RRP1-202ENST00000471909 COL4A1P02462 1669 aa20.43■□□□□ 0.86
RRP1-202ENST00000471909 LAMB2P55268 1798 aa20.42■□□□□ 0.86
RRP1-202ENST00000471909 FAM182BQ5T319 152 aa20.42■□□□□ 0.86
RRP1-202ENST00000471909 MB21D2Q8IYB1 491 aaPredicted RBP20.42■□□□□ 0.86
RRP1-202ENST00000471909 BCL2L12Q9HB09 334 aa20.42■□□□□ 0.86
RRP1-202ENST00000471909 NCOA5Q9HCD5 579 aaKnown RBP20.42■□□□□ 0.86
RRP1-202ENST00000471909 KRT85P78386 507 aa20.42■□□□□ 0.86
RRP1-202ENST00000471909 CCDC183Q5T5S1 534 aa20.42■□□□□ 0.86
RRP1-202ENST00000471909 BICDL1Q6ZP65 573 aa20.42■□□□□ 0.86
RRP1-202ENST00000471909 EVCP57679 992 aa20.41■□□□□ 0.86
RRP1-202ENST00000471909 MYRIPQ8NFW9 859 aa20.41■□□□□ 0.86
RRP1-202ENST00000471909 CDC5LQ99459 802 aaKnown RBP20.41■□□□□ 0.86
RRP1-202ENST00000471909 ARID3AQ99856 593 aa20.41■□□□□ 0.86
RRP1-202ENST00000471909 NBPF3Q9H094 633 aa20.41■□□□□ 0.86
RRP1-202ENST00000471909 USP25Q9UHP3 1055 aa20.41■□□□□ 0.86
RRP1-202ENST00000471909 MYO5AQ9Y4I1 1855 aaKnown RBP20.41■□□□□ 0.86
RRP1-202ENST00000471909 TBC1D9BQ66K14 1250 aa20.41■□□□□ 0.86
RRP1-202ENST00000471909 TTC6Q86TZ1 520 aa20.41■□□□□ 0.86
RRP1-202ENST00000471909 NAP1L2Q9ULW6 460 aaPredicted RBP20.41■□□□□ 0.86
RRP1-202ENST00000471909 PTPDC1A2A3K4 754 aa20.4■□□□□ 0.86
RRP1-202ENST00000471909 PRC1O43663 620 aa20.4■□□□□ 0.86
RRP1-202ENST00000471909 ANTXR2P58335 489 aa20.4■□□□□ 0.86
RRP1-202ENST00000471909 SF3B3Q15393 1217 aaKnown RBP20.4■□□□□ 0.86
RRP1-202ENST00000471909 NCOA7Q8NI08 942 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms