RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 CD209Q9NNX6 404 aa25.41■■□□□ 1.66
CCDC78-208ENST00000471861 INHBEP58166 350 aa25.4■■□□□ 1.66
CCDC78-208ENST00000471861 CHRNDQ07001 517 aa25.4■■□□□ 1.66
CCDC78-208ENST00000471861 DLGAP5Q15398 846 aa25.4■■□□□ 1.66
CCDC78-208ENST00000471861 CD99L2Q8TCZ2 262 aa25.39■■□□□ 1.66
CCDC78-208ENST00000471861 TSR2Q969E8 191 aaKnown RBP25.39■■□□□ 1.66
CCDC78-208ENST00000471861 PPP2R3BQ9Y5P8 575 aa25.39■■□□□ 1.66
CCDC78-208ENST00000471861 CLRN2A0PK11 232 aa25.38■■□□□ 1.65
CCDC78-208ENST00000471861 CSF1RP07333 972 aa25.38■■□□□ 1.65
CCDC78-208ENST00000471861 CRHR2Q13324 411 aa25.38■■□□□ 1.65
CCDC78-208ENST00000471861 PTPN22Q9Y2R2 807 aa25.38■■□□□ 1.65
CCDC78-208ENST00000471861 OTOFQ9HC10 1997 aa25.38■■□□□ 1.65
CCDC78-208ENST00000471861 GCKRQ14397 625 aa25.37■■□□□ 1.65
CCDC78-208ENST00000471861 INTS3Q68E01 1043 aaKnown RBP25.37■■□□□ 1.65
CCDC78-208ENST00000471861 MPHOSPH8Q99549 860 aa25.37■■□□□ 1.65
CCDC78-208ENST00000471861 SPDYE2BA6NHP3 402 aa25.36■■□□□ 1.65
CCDC78-208ENST00000471861 SPDYE6P0CI01 402 aa25.36■■□□□ 1.65
CCDC78-208ENST00000471861 CFAP100Q494V2 611 aa25.36■■□□□ 1.65
CCDC78-208ENST00000471861 NBPF12Q5TAG4 269 aaPredicted RBP25.36■■□□□ 1.65
CCDC78-208ENST00000471861 ARMC5Q96C12 935 aa25.36■■□□□ 1.65
CCDC78-208ENST00000471861 PTPN18Q99952 460 aa25.36■■□□□ 1.65
CCDC78-208ENST00000471861 CHMP4AQ9BY43 222 aa25.36■■□□□ 1.65
CCDC78-208ENST00000471861 F8W031 263 aaPredicted RBP25.35■■□□□ 1.65
CCDC78-208ENST00000471861 PPP1R12BO60237 982 aaPredicted RBP25.35■■□□□ 1.65
CCDC78-208ENST00000471861 TAF5LO75529 589 aa25.35■■□□□ 1.65
CCDC78-208ENST00000471861 KCNJ4P48050 445 aa25.35■■□□□ 1.65
CCDC78-208ENST00000471861 C15orf52Q6ZUT6 534 aaKnown RBP25.35■■□□□ 1.65
CCDC78-208ENST00000471861 ERO1AQ96HE7 468 aa25.35■■□□□ 1.65
CCDC78-208ENST00000471861 PRMT6Q96LA8 375 aaPredicted RBP25.35■■□□□ 1.65
CCDC78-208ENST00000471861 STK31Q9BXU1 1019 aa25.35■■□□□ 1.65
CCDC78-208ENST00000471861 KIAA0100Q14667 2235 aaKnown RBP25.35■■□□□ 1.65
CCDC78-208ENST00000471861 UNCXA6NJT0 531 aa25.34■■□□□ 1.65
CCDC78-208ENST00000471861 HELBQ8NG08 1087 aaPredicted RBP25.34■■□□□ 1.65
CCDC78-208ENST00000471861 PRKRIP1Q9H875 184 aaPredicted RBP25.34■■□□□ 1.65
CCDC78-208ENST00000471861 USP2O75604 605 aaPredicted RBP25.33■■□□□ 1.65
CCDC78-208ENST00000471861 IL1R1P14778 569 aa25.33■■□□□ 1.65
CCDC78-208ENST00000471861 EN2P19622 333 aaPredicted RBP25.33■■□□□ 1.65
CCDC78-208ENST00000471861 JAG2Q9Y219 1238 aa25.33■■□□□ 1.65
CCDC78-208ENST00000471861 TESPA1A2RU30 521 aaPredicted RBP25.32■■□□□ 1.64
CCDC78-208ENST00000471861 VEZTQ9HBM0 779 aa25.32■■□□□ 1.64
CCDC78-208ENST00000471861 SLC4A2P04920 1241 aa25.31■■□□□ 1.64
CCDC78-208ENST00000471861 SUPT20HL1Q3ZLR7 823 aa25.31■■□□□ 1.64
CCDC78-208ENST00000471861 EFCC1Q9HA90 598 aa25.31■■□□□ 1.64
CCDC78-208ENST00000471861 IREB2P48200 963 aaKnown RBP25.3■■□□□ 1.64
CCDC78-208ENST00000471861 FKBP1AP62942 108 aaKnown RBP25.3■■□□□ 1.64
CCDC78-208ENST00000471861 FLIIQ13045 1269 aa25.3■■□□□ 1.64
CCDC78-208ENST00000471861 RASA3Q14644 834 aa25.3■■□□□ 1.64
CCDC78-208ENST00000471861 TWISTNBQ3B726 338 aaPredicted RBP25.3■■□□□ 1.64
CCDC78-208ENST00000471861 CDAN1Q8IWY9 1227 aa25.3■■□□□ 1.64
CCDC78-208ENST00000471861 ANKRD18BA2A2Z9 1011 aa25.29■■□□□ 1.64
CCDC78-208ENST00000471861 MYO1BO43795 1136 aa25.29■■□□□ 1.64
CCDC78-208ENST00000471861 SP3Q02447 781 aa25.29■■□□□ 1.64
CCDC78-208ENST00000471861 ANKRD13AQ8IZ07 590 aa25.29■■□□□ 1.64
CCDC78-208ENST00000471861 FXR1P51114 621 aaKnown RBP eCLIP25.28■■□□□ 1.64
CCDC78-208ENST00000471861 FOXO4P98177 505 aa25.28■■□□□ 1.64
CCDC78-208ENST00000471861 ZNF804AQ7Z570 1209 aa25.28■■□□□ 1.64
CCDC78-208ENST00000471861 LINS1Q8NG48 757 aa25.28■■□□□ 1.64
CCDC78-208ENST00000471861 DNAAF4Q8WXU2 420 aa25.28■■□□□ 1.64
CCDC78-208ENST00000471861 ZNF333Q96JL9 665 aa25.28■■□□□ 1.64
CCDC78-208ENST00000471861 MS4A4AQ96JQ5 239 aa25.28■■□□□ 1.64
CCDC78-208ENST00000471861 ELP3Q9H9T3 547 aa25.28■■□□□ 1.64
CCDC78-208ENST00000471861 OTUD7BQ6GQQ9 843 aa25.27■■□□□ 1.64
CCDC78-208ENST00000471861 CNKSR2Q8WXI2 1034 aa25.27■■□□□ 1.64
CCDC78-208ENST00000471861 OPTNQ96CV9 577 aa25.27■■□□□ 1.64
CCDC78-208ENST00000471861 MYH16Q9H6N6 1097 aa25.27■■□□□ 1.64
CCDC78-208ENST00000471861 SPDYE2Q495Y8 402 aa25.25■■□□□ 1.63
CCDC78-208ENST00000471861 BRI3BPQ8WY22 251 aa25.25■■□□□ 1.63
CCDC78-208ENST00000471861 TEPSINQ96N21 525 aa25.25■■□□□ 1.63
CCDC78-208ENST00000471861 ARAP2Q8WZ64 1704 aa25.25■■□□□ 1.63
CCDC78-208ENST00000471861 RBM5P52756 815 aaKnown RBP eCLIP25.24■■□□□ 1.63
CCDC78-208ENST00000471861 IFIT5Q13325 482 aaKnown RBP25.24■■□□□ 1.63
CCDC78-208ENST00000471861 FKBP5Q13451 457 aaPredicted RBP25.24■■□□□ 1.63
CCDC78-208ENST00000471861 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.24■■□□□ 1.63
CCDC78-208ENST00000471861 PTCH2Q9Y6C5 1203 aa25.24■■□□□ 1.63
CCDC78-208ENST00000471861 FAM205AQ6ZU69 1335 aa25.23■■□□□ 1.63
CCDC78-208ENST00000471861 EPHA10Q5JZY3 1008 aa25.23■■□□□ 1.63
CCDC78-208ENST00000471861 ZNF70Q9UC06 446 aaPredicted RBP25.23■■□□□ 1.63
CCDC78-208ENST00000471861 ZSWIM8A7E2V4 1837 aa25.23■■□□□ 1.63
CCDC78-208ENST00000471861 WWC1Q8IX03 1113 aa25.22■■□□□ 1.63
CCDC78-208ENST00000471861 ZNF594Q96JF6 807 aaPredicted RBP25.22■■□□□ 1.63
CCDC78-208ENST00000471861 TDRD3Q9H7E2 651 aaKnown RBP25.22■■□□□ 1.63
CCDC78-208ENST00000471861 CHMP3Q9Y3E7 222 aa25.22■■□□□ 1.63
CCDC78-208ENST00000471861 VGLL4Q14135 290 aa25.21■■□□□ 1.63
CCDC78-208ENST00000471861 CCDC27Q2M243 656 aa25.21■■□□□ 1.63
CCDC78-208ENST00000471861 TNFAIP1Q13829 316 aa25.2■■□□□ 1.62
CCDC78-208ENST00000471861 MFSD14BQ5SR56 506 aa25.2■■□□□ 1.62
CCDC78-208ENST00000471861 FAM43AQ8N2R8 423 aa25.2■■□□□ 1.62
CCDC78-208ENST00000471861 TMEM39BQ9GZU3 492 aa25.2■■□□□ 1.62
CCDC78-208ENST00000471861 SERPINA10Q9UK55 444 aa25.2■■□□□ 1.62
CCDC78-208ENST00000471861 COLQQ9Y215 455 aaPredicted RBP25.2■■□□□ 1.62
CCDC78-208ENST00000471861 CCL15-CCL14A0A0B4J2E2 113 aa25.19■■□□□ 1.62
CCDC78-208ENST00000471861 PLIN1O60240 522 aa25.19■■□□□ 1.62
CCDC78-208ENST00000471861 TAF1CQ15572 869 aaPredicted RBP25.19■■□□□ 1.62
CCDC78-208ENST00000471861 CCL15Q16663 113 aa25.19■■□□□ 1.62
CCDC78-208ENST00000471861 SLC9C1Q4G0N8 1177 aa25.19■■□□□ 1.62
CCDC78-208ENST00000471861 LMBR1LQ6UX01 489 aa25.19■■□□□ 1.62
CCDC78-208ENST00000471861 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.19■■□□□ 1.62
CCDC78-208ENST00000471861 TDRD7Q8NHU6 1098 aaKnown RBP25.19■■□□□ 1.62
CCDC78-208ENST00000471861 TTF2Q9UNY4 1162 aaKnown RBP25.19■■□□□ 1.62
CCDC78-208ENST00000471861 F6X3S4 739 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms