RNA–Protein interactions for RNA: ENST00000471842.1

LTA-215, Transcript of lymphotoxin alpha, humanhuman

TSL 2

Gene LTA, Length 1,497 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-215ENST00000471842 C15orf52Q6ZUT6 534 aaKnown RBP16.49■□□□□ 0.23
LTA-215ENST00000471842 TRMT2AQ8IZ69 625 aaKnown RBP16.49■□□□□ 0.23
LTA-215ENST00000471842 MIER1Q8N108 512 aa16.49■□□□□ 0.23
LTA-215ENST00000471842 CERS5Q8N5B7 392 aa16.49■□□□□ 0.23
LTA-215ENST00000471842 PRDM10Q9NQV6 1147 aa16.49■□□□□ 0.23
LTA-215ENST00000471842 IQSEC3Q9UPP2 1182 aaPredicted RBP16.49■□□□□ 0.23
LTA-215ENST00000471842 IL1R1P14778 569 aa16.48■□□□□ 0.23
LTA-215ENST00000471842 HIBADHP31937 336 aaKnown RBP16.48■□□□□ 0.23
LTA-215ENST00000471842 NF2P35240 595 aa16.48■□□□□ 0.23
LTA-215ENST00000471842 NOGQ13253 232 aa16.48■□□□□ 0.23
LTA-215ENST00000471842 PRKG1Q13976 671 aa16.48■□□□□ 0.23
LTA-215ENST00000471842 UBE4AQ14139 1066 aa16.48■□□□□ 0.23
LTA-215ENST00000471842 RABL6Q3YEC7 729 aaPredicted RBP16.48■□□□□ 0.23
LTA-215ENST00000471842 MOB2Q70IA6 237 aa16.48■□□□□ 0.23
LTA-215ENST00000471842 ZIC5Q96T25 663 aa16.48■□□□□ 0.23
LTA-215ENST00000471842 API5Q9BZZ5 524 aaKnown RBP16.48■□□□□ 0.23
LTA-215ENST00000471842 BRPF1P55201 1214 aaPredicted RBP16.48■□□□□ 0.23
LTA-215ENST00000471842 HNRNPUQ00839 825 aaKnown RBP eCLIP16.48■□□□□ 0.23
LTA-215ENST00000471842 CHAF1AQ13111 956 aaPredicted RBP16.48■□□□□ 0.23
LTA-215ENST00000471842 APOBEC3FQ8IUX4 373 aaKnown RBP16.48■□□□□ 0.23
LTA-215ENST00000471842 RIPOR2Q9Y4F9 1068 aa16.48■□□□□ 0.23
LTA-215ENST00000471842 PCDHAC2Q9Y5I4 1007 aa16.48■□□□□ 0.23
LTA-215ENST00000471842 POLR2AP24928 1970 aaKnown RBP16.47■□□□□ 0.23
LTA-215ENST00000471842 CLRN2A0PK11 232 aa16.47■□□□□ 0.23
LTA-215ENST00000471842 CFAP100Q494V2 611 aa16.47■□□□□ 0.23
LTA-215ENST00000471842 FRAT1Q92837 279 aaPredicted RBP16.47■□□□□ 0.23
LTA-215ENST00000471842 CCDC102AQ96A19 550 aa16.47■□□□□ 0.23
LTA-215ENST00000471842 SIL1Q9H173 461 aa16.47■□□□□ 0.23
LTA-215ENST00000471842 VEZTQ9HBM0 779 aa16.47■□□□□ 0.23
LTA-215ENST00000471842 KIF16BQ96L93 1317 aa16.46■□□□□ 0.23
LTA-215ENST00000471842 UBE2Q2LH0YL09 131 aa16.46■□□□□ 0.23
LTA-215ENST00000471842 MYO1BO43795 1136 aa16.46■□□□□ 0.23
LTA-215ENST00000471842 RARSP54136 660 aaKnown RBP16.46■□□□□ 0.23
LTA-215ENST00000471842 KIF23Q02241 960 aaPredicted RBP16.46■□□□□ 0.23
LTA-215ENST00000471842 CAVIN4Q5BKX8 364 aa16.46■□□□□ 0.23
LTA-215ENST00000471842 MFSD14BQ5SR56 506 aa16.46■□□□□ 0.23
LTA-215ENST00000471842 FAM84BQ96KN1 310 aaPredicted RBP16.46■□□□□ 0.23
LTA-215ENST00000471842 PAPPA2Q9BXP8 1791 aa16.45■□□□□ 0.22
LTA-215ENST00000471842 TTF2Q9UNY4 1162 aaKnown RBP16.45■□□□□ 0.22
LTA-215ENST00000471842 FAM155AB1AL88 458 aaPredicted RBP16.44■□□□□ 0.22
LTA-215ENST00000471842 SLC10A3P09131 477 aa16.44■□□□□ 0.22
LTA-215ENST00000471842 MMP14P50281 582 aa16.44■□□□□ 0.22
LTA-215ENST00000471842 MKRN3Q13064 507 aaKnown RBP16.44■□□□□ 0.22
LTA-215ENST00000471842 LRRFIP2Q9Y608 721 aaKnown RBP16.44■□□□□ 0.22
LTA-215ENST00000471842 PDE8BO95263 885 aa16.43■□□□□ 0.22
LTA-215ENST00000471842 FKBP1BP68106 108 aa16.43■□□□□ 0.22
LTA-215ENST00000471842 PUM3Q15397 648 aaKnown RBP16.43■□□□□ 0.22
LTA-215ENST00000471842 RASAL3Q86YV0 1011 aa16.43■□□□□ 0.22
LTA-215ENST00000471842 TDRD7Q8NHU6 1098 aaKnown RBP16.43■□□□□ 0.22
LTA-215ENST00000471842 SPDYE2BA6NHP3 402 aa16.42■□□□□ 0.22
LTA-215ENST00000471842 EYA2O00167 538 aa16.42■□□□□ 0.22
LTA-215ENST00000471842 CA12O43570 354 aa16.42■□□□□ 0.22
LTA-215ENST00000471842 IFIT1P09914 478 aaKnown RBP16.42■□□□□ 0.22
LTA-215ENST00000471842 SPDYE6P0CI01 402 aa16.42■□□□□ 0.22
LTA-215ENST00000471842 MEIS3Q99687 375 aa16.42■□□□□ 0.22
LTA-215ENST00000471842 FZD1Q9UP38 647 aa16.42■□□□□ 0.22
LTA-215ENST00000471842 FAM205AQ6ZU69 1335 aa16.42■□□□□ 0.22
LTA-215ENST00000471842 SLC5A1P13866 664 aa16.42■□□□□ 0.22
LTA-215ENST00000471842 BCAMP50895 628 aa16.42■□□□□ 0.22
LTA-215ENST00000471842 FKBP1AP62942 108 aaKnown RBP16.42■□□□□ 0.22
LTA-215ENST00000471842 ARMC9Q7Z3E5 817 aa16.42■□□□□ 0.22
LTA-215ENST00000471842 VGLL2Q8N8G2 317 aa16.42■□□□□ 0.22
LTA-215ENST00000471842 CLUAP1Q96AJ1 413 aa16.42■□□□□ 0.22
LTA-215ENST00000471842 ZBED3Q96IU2 234 aaPredicted RBP16.42■□□□□ 0.22
LTA-215ENST00000471842 PRMT6Q96LA8 375 aaPredicted RBP16.42■□□□□ 0.22
LTA-215ENST00000471842 DEFB129Q9H1M3 183 aa16.42■□□□□ 0.22
LTA-215ENST00000471842 AOX1Q06278 1338 aa16.41■□□□□ 0.22
LTA-215ENST00000471842 BCAR3O75815 825 aa16.41■□□□□ 0.22
LTA-215ENST00000471842 RFX5P48382 616 aaPredicted RBP16.41■□□□□ 0.22
LTA-215ENST00000471842 PTPN12Q05209 780 aaKnown RBP16.41■□□□□ 0.22
LTA-215ENST00000471842 ANGEL1Q9UNK9 670 aaKnown RBP16.41■□□□□ 0.22
LTA-215ENST00000471842 TNNQ9UQP3 1299 aa16.41■□□□□ 0.22
LTA-215ENST00000471842 IPO8O15397 1037 aaKnown RBP16.4■□□□□ 0.22
LTA-215ENST00000471842 TRPA1O75762 1119 aa16.4■□□□□ 0.22
LTA-215ENST00000471842 FBXO33Q7Z6M2 555 aa16.4■□□□□ 0.22
LTA-215ENST00000471842 MTMR14Q8NCE2 650 aa16.4■□□□□ 0.22
LTA-215ENST00000471842 PA2G4Q9UQ80 394 aaKnown RBP16.4■□□□□ 0.22
LTA-215ENST00000471842 HDAC5Q9UQL6 1122 aa16.4■□□□□ 0.22
LTA-215ENST00000471842 ARAP2Q8WZ64 1704 aa16.39■□□□□ 0.22
LTA-215ENST00000471842 COL1A1P02452 1464 aaPredicted RBP16.39■□□□□ 0.21
LTA-215ENST00000471842 GRIK5Q16478 980 aa16.39■□□□□ 0.21
LTA-215ENST00000471842 TDRD3Q9H7E2 651 aaKnown RBP16.39■□□□□ 0.21
LTA-215ENST00000471842 CRKP46108 304 aa16.38■□□□□ 0.21
LTA-215ENST00000471842 ATP2B3Q16720 1220 aa16.38■□□□□ 0.21
LTA-215ENST00000471842 LPIN2Q92539 896 aa16.38■□□□□ 0.21
LTA-215ENST00000471842 ARHGAP45Q92619 1136 aa16.38■□□□□ 0.21
LTA-215ENST00000471842 CEP126Q9P2H0 1117 aa16.38■□□□□ 0.21
LTA-215ENST00000471842 SERPINA10Q9UK55 444 aa16.38■□□□□ 0.21
LTA-215ENST00000471842 TCP10L2B9ZVM9 353 aa16.37■□□□□ 0.21
LTA-215ENST00000471842 GNAI3P08754 354 aa16.37■□□□□ 0.21
LTA-215ENST00000471842 TRIM27P14373 513 aa16.37■□□□□ 0.21
LTA-215ENST00000471842 ATG9AQ7Z3C6 839 aa16.37■□□□□ 0.21
LTA-215ENST00000471842 DZIP1LQ8IYY4 767 aaKnown RBP16.37■□□□□ 0.21
LTA-215ENST00000471842 TBC1D22AQ8WUA7 517 aa16.37■□□□□ 0.21
LTA-215ENST00000471842 CSRNP1Q96S65 589 aa16.37■□□□□ 0.21
LTA-215ENST00000471842 RNF186Q9NXI6 227 aa16.37■□□□□ 0.21
LTA-215ENST00000471842 ZNF70Q9UC06 446 aaPredicted RBP16.37■□□□□ 0.21
LTA-215ENST00000471842 PPP2R3BQ9Y5P8 575 aa16.37■□□□□ 0.21
LTA-215ENST00000471842 ECM29Q5VYK3 1845 aa16.37■□□□□ 0.21
LTA-215ENST00000471842 SRGAP3O43295 1099 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms