RNA–Protein interactions for RNA: ENST00000471603.6

PKD1-207, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,505 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-207ENST00000471603 GPATCH11Q8N954 259 aa16.34■□□□□ 0.21
PKD1-207ENST00000471603 DNAAF4Q8WXU2 420 aa16.34■□□□□ 0.21
PKD1-207ENST00000471603 FIBPO43427 364 aa16.33■□□□□ 0.2
PKD1-207ENST00000471603 CPP00450 1065 aa16.33■□□□□ 0.2
PKD1-207ENST00000471603 CCT4P50991 539 aaKnown RBP16.33■□□□□ 0.2
PKD1-207ENST00000471603 CEP89Q96ST8 783 aa16.33■□□□□ 0.2
PKD1-207ENST00000471603 TJP1Q07157 1748 aa16.33■□□□□ 0.2
PKD1-207ENST00000471603 SKILP12757 684 aa16.33■□□□□ 0.2
PKD1-207ENST00000471603 RXRBP28702 533 aa16.33■□□□□ 0.2
PKD1-207ENST00000471603 RIC3Q7Z5B4 369 aa16.33■□□□□ 0.2
PKD1-207ENST00000471603 RPAINQ86UA6 219 aa16.33■□□□□ 0.2
PKD1-207ENST00000471603 MRFAP1L1Q96HT8 127 aa16.33■□□□□ 0.2
PKD1-207ENST00000471603 ATP5J2-PTCD1G3V325 749 aa16.32■□□□□ 0.2
PKD1-207ENST00000471603 CYP19A1P11511 503 aaPredicted RBP16.32■□□□□ 0.2
PKD1-207ENST00000471603 SYT1P21579 422 aa16.32■□□□□ 0.2
PKD1-207ENST00000471603 MCTP2Q6DN12 878 aa16.32■□□□□ 0.2
PKD1-207ENST00000471603 RBM43Q6ZSC3 357 aaKnown RBP16.32■□□□□ 0.2
PKD1-207ENST00000471603 NUP62CLQ9H1M0 184 aa16.32■□□□□ 0.2
PKD1-207ENST00000471603 ORC3Q9UBD5 711 aaPredicted RBP16.32■□□□□ 0.2
PKD1-207ENST00000471603 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.32■□□□□ 0.2
PKD1-207ENST00000471603 MYH14Q7Z406 1995 aaKnown RBP16.32■□□□□ 0.2
PKD1-207ENST00000471603 APBB1O00213 710 aa16.31■□□□□ 0.2
PKD1-207ENST00000471603 CASTP20810 708 aaKnown RBP16.3■□□□□ 0.2
PKD1-207ENST00000471603 CCZ1BP86790 482 aa16.3■□□□□ 0.2
PKD1-207ENST00000471603 CCZ1P86791 482 aaPredicted RBP16.3■□□□□ 0.2
PKD1-207ENST00000471603 SMC1AQ14683 1233 aaKnown RBP16.3■□□□□ 0.2
PKD1-207ENST00000471603 GRIPAP1Q4V328 841 aa16.3■□□□□ 0.2
PKD1-207ENST00000471603 ANO2Q9NQ90 1003 aa16.3■□□□□ 0.2
PKD1-207ENST00000471603 HMMRO75330 724 aa16.3■□□□□ 0.2
PKD1-207ENST00000471603 STARD3NLO95772 234 aa16.3■□□□□ 0.2
PKD1-207ENST00000471603 NBPF7P0C2Y1 421 aaPredicted RBP16.3■□□□□ 0.2
PKD1-207ENST00000471603 ANO6Q4KMQ2 910 aa16.3■□□□□ 0.2
PKD1-207ENST00000471603 KSR2Q6VAB6 950 aa16.3■□□□□ 0.2
PKD1-207ENST00000471603 EGFL6Q8IUX8 553 aa16.3■□□□□ 0.2
PKD1-207ENST00000471603 MYD88Q99836 296 aa16.3■□□□□ 0.2
PKD1-207ENST00000471603 UPF3BQ9BZI7 483 aaKnown RBP16.3■□□□□ 0.2
PKD1-207ENST00000471603 CHMLP26374 656 aa16.29■□□□□ 0.2
PKD1-207ENST00000471603 BEND3Q5T5X7 828 aa16.29■□□□□ 0.2
PKD1-207ENST00000471603 ANKRD13DQ6ZTN6 518 aa16.29■□□□□ 0.2
PKD1-207ENST00000471603 EP400NLQ6ZTU2 488 aa16.29■□□□□ 0.2
PKD1-207ENST00000471603 SRRTQ9BXP5 876 aaKnown RBP16.29■□□□□ 0.2
PKD1-207ENST00000471603 ADAM21Q9UKJ8 722 aa16.29■□□□□ 0.2
PKD1-207ENST00000471603 NHSQ6T4R5 1651 aa16.29■□□□□ 0.2
PKD1-207ENST00000471603 NPHP1O15259 732 aa16.29■□□□□ 0.2
PKD1-207ENST00000471603 TBC1D8O95759 1140 aa16.29■□□□□ 0.2
PKD1-207ENST00000471603 CRKLP46109 303 aaKnown RBP16.29■□□□□ 0.2
PKD1-207ENST00000471603 CCDC158Q5M9N0 1113 aa16.29■□□□□ 0.2
PKD1-207ENST00000471603 LEKR1Q6ZMV7 388 aa16.29■□□□□ 0.2
PKD1-207ENST00000471603 MMS22LQ6ZRQ5 1243 aa16.29■□□□□ 0.2
PKD1-207ENST00000471603 UBXN4Q92575 508 aa16.29■□□□□ 0.2
PKD1-207ENST00000471603 TBC1D2BQ9UPU7 963 aa16.29■□□□□ 0.2
PKD1-207ENST00000471603 KCNJ6P48051 423 aa16.28■□□□□ 0.2
PKD1-207ENST00000471603 SNW1Q13573 536 aaKnown RBP16.28■□□□□ 0.2
PKD1-207ENST00000471603 SALL3Q9BXA9 1300 aa16.28■□□□□ 0.2
PKD1-207ENST00000471603 EIF3CLB5ME19 914 aaKnown RBP16.28■□□□□ 0.2
PKD1-207ENST00000471603 HSPA4P34932 840 aa16.28■□□□□ 0.2
PKD1-207ENST00000471603 CORO7P57737 925 aa16.28■□□□□ 0.2
PKD1-207ENST00000471603 LINC00116Q8NCU8 138 aa16.28■□□□□ 0.2
PKD1-207ENST00000471603 EIF3CQ99613 913 aaKnown RBP16.28■□□□□ 0.2
PKD1-207ENST00000471603 USP44Q9H0E7 712 aa16.28■□□□□ 0.2
PKD1-207ENST00000471603 ARFGEF2Q9Y6D5 1785 aa16.28■□□□□ 0.2
PKD1-207ENST00000471603 IGKV5-2P06315 115 aa16.27■□□□□ 0.2
PKD1-207ENST00000471603 SMC3Q9UQE7 1217 aa16.27■□□□□ 0.2
PKD1-207ENST00000471603 CCDC196A0A1B0GTZ2 297 aa16.27■□□□□ 0.2
PKD1-207ENST00000471603 GNAI2P04899 355 aa16.27■□□□□ 0.2
PKD1-207ENST00000471603 SUFUQ9UMX1 484 aa16.27■□□□□ 0.2
PKD1-207ENST00000471603 PSDA5PKW4 1024 aaPredicted RBP16.26■□□□□ 0.19
PKD1-207ENST00000471603 CCDC69A6NI79 296 aa16.26■□□□□ 0.19
PKD1-207ENST00000471603 SASH3O75995 380 aa16.26■□□□□ 0.19
PKD1-207ENST00000471603 DDX58O95786 925 aaKnown RBP16.26■□□□□ 0.19
PKD1-207ENST00000471603 LMAN1P49257 510 aa16.26■□□□□ 0.19
PKD1-207ENST00000471603 DNM1Q05193 864 aaKnown RBP16.26■□□□□ 0.19
PKD1-207ENST00000471603 SART3Q15020 963 aaKnown RBP16.26■□□□□ 0.19
PKD1-207ENST00000471603 HSP90AB3PQ58FF7 597 aa16.26■□□□□ 0.19
PKD1-207ENST00000471603 AMIGO3Q86WK7 504 aa16.26■□□□□ 0.19
PKD1-207ENST00000471603 ZSCAN16Q9H4T2 348 aaPredicted RBP16.26■□□□□ 0.19
PKD1-207ENST00000471603 ZCCHC17Q9NP64 241 aaKnown RBP16.26■□□□□ 0.19
PKD1-207ENST00000471603 DDX19AQ9NUU7 478 aaKnown RBP16.26■□□□□ 0.19
PKD1-207ENST00000471603 MKRN1Q9UHC7 482 aaKnown RBP16.26■□□□□ 0.19
PKD1-207ENST00000471603 ZNF165P49910 485 aa16.26■□□□□ 0.19
PKD1-207ENST00000471603 INTS5Q6P9B9 1019 aaKnown RBP16.26■□□□□ 0.19
PKD1-207ENST00000471603 ILDR1Q86SU0 546 aaPredicted RBP16.26■□□□□ 0.19
PKD1-207ENST00000471603 TTC14Q96N46 770 aa16.26■□□□□ 0.19
PKD1-207ENST00000471603 CCNL1Q9UK58 526 aaPredicted RBP16.26■□□□□ 0.19
PKD1-207ENST00000471603 LIMCH1Q9UPQ0 1083 aa16.26■□□□□ 0.19
PKD1-207ENST00000471603 EFCAB8A8MWE9 144 aa16.25■□□□□ 0.19
PKD1-207ENST00000471603 GSDMDP57764 484 aa16.25■□□□□ 0.19
PKD1-207ENST00000471603 TRDNQ13061 729 aa16.25■□□□□ 0.19
PKD1-207ENST00000471603 CC2D1AQ6P1N0 951 aaPredicted RBP16.25■□□□□ 0.19
PKD1-207ENST00000471603 TNMDQ9H2S6 317 aa16.25■□□□□ 0.19
PKD1-207ENST00000471603 HLFQ16534 295 aa16.25■□□□□ 0.19
PKD1-207ENST00000471603 LRRN4CLQ8ND94 238 aa16.25■□□□□ 0.19
PKD1-207ENST00000471603 TRMT1Q9NXH9 659 aaKnown RBP16.25■□□□□ 0.19
PKD1-207ENST00000471603 MTMR6Q9Y217 621 aa16.25■□□□□ 0.19
PKD1-207ENST00000471603 PATL2C9JE40 543 aaKnown RBP16.24■□□□□ 0.19
PKD1-207ENST00000471603 TADA3O75528 432 aa16.24■□□□□ 0.19
PKD1-207ENST00000471603 GPTP24298 496 aa16.24■□□□□ 0.19
PKD1-207ENST00000471603 NBPF20Q3BBV1 942 aa16.24■□□□□ 0.19
PKD1-207ENST00000471603 FAM196AQ6ZSG2 479 aa16.24■□□□□ 0.19
PKD1-207ENST00000471603 LRRC4BQ9NT99 713 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms