RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 PDE3BQ13370 1112 aa9.61□□□□□ -0.87
PRPF40A-206ENST00000471167 KIAA0319Q5VV43 1072 aa9.61□□□□□ -0.87
PRPF40A-206ENST00000471167 KLHL23Q8NBE8 558 aa9.61□□□□□ -0.87
PRPF40A-206ENST00000471167 CPNE3O75131 537 aaKnown RBP9.6□□□□□ -0.87
PRPF40A-206ENST00000471167 DLGAP3O95886 979 aa9.6□□□□□ -0.87
PRPF40A-206ENST00000471167 PIP4K2BP78356 416 aa9.6□□□□□ -0.87
PRPF40A-206ENST00000471167 CCDC74AQ96AQ1 378 aa9.6□□□□□ -0.87
PRPF40A-206ENST00000471167 NPHS2Q9NP85 383 aa9.6□□□□□ -0.87
PRPF40A-206ENST00000471167 H2AFB1P0C5Y9 115 aa9.59□□□□□ -0.87
PRPF40A-206ENST00000471167 H2AFB2P0C5Z0 115 aa9.59□□□□□ -0.87
PRPF40A-206ENST00000471167 ESRRAP11474 423 aaPredicted RBP9.59□□□□□ -0.87
PRPF40A-206ENST00000471167 ZNF423Q2M1K9 1284 aa9.59□□□□□ -0.87
PRPF40A-206ENST00000471167 ASAP3Q8TDY4 903 aa9.59□□□□□ -0.87
PRPF40A-206ENST00000471167 WNT8BQ93098 351 aa9.59□□□□□ -0.87
PRPF40A-206ENST00000471167 CSRNP1Q96S65 589 aa9.59□□□□□ -0.87
PRPF40A-206ENST00000471167 NRSN2Q9GZP1 204 aa9.59□□□□□ -0.87
PRPF40A-206ENST00000471167 OSGEPQ9NPF4 335 aa9.59□□□□□ -0.87
PRPF40A-206ENST00000471167 KCNA1Q09470 495 aa9.58□□□□□ -0.88
PRPF40A-206ENST00000471167 PI16Q6UXB8 463 aa9.58□□□□□ -0.88
PRPF40A-206ENST00000471167 GLIS3Q8NEA6 775 aa9.58□□□□□ -0.88
PRPF40A-206ENST00000471167 EPS8L3Q8TE67 593 aaKnown RBP9.58□□□□□ -0.88
PRPF40A-206ENST00000471167 SLC7A3Q8WY07 619 aa9.58□□□□□ -0.88
PRPF40A-206ENST00000471167 LIN7BQ9HAP6 207 aa9.58□□□□□ -0.88
PRPF40A-206ENST00000471167 BIN2Q9UBW5 565 aaPredicted RBP9.58□□□□□ -0.88
PRPF40A-206ENST00000471167 DCTN4Q9UJW0 460 aa9.58□□□□□ -0.88
PRPF40A-206ENST00000471167 A0A096LPE4 126 aa9.57□□□□□ -0.88
PRPF40A-206ENST00000471167 A0A1W2PPZ6 126 aa9.57□□□□□ -0.88
PRPF40A-206ENST00000471167 NLRP12P59046 1061 aa9.57□□□□□ -0.88
PRPF40A-206ENST00000471167 ACAD11Q709F0 780 aa9.57□□□□□ -0.88
PRPF40A-206ENST00000471167 DMRTB1Q96MA1 342 aa9.57□□□□□ -0.88
PRPF40A-206ENST00000471167 IKBKEQ14164 716 aa9.56□□□□□ -0.88
PRPF40A-206ENST00000471167 PRSS36Q5K4E3 855 aa9.56□□□□□ -0.88
PRPF40A-206ENST00000471167 ARMC10Q8N2F6 343 aa9.56□□□□□ -0.88
PRPF40A-206ENST00000471167 TMC1Q8TDI8 760 aa9.56□□□□□ -0.88
PRPF40A-206ENST00000471167 DNAJC25Q9H1X3 360 aa9.56□□□□□ -0.88
PRPF40A-206ENST00000471167 TREHO43280 583 aa9.55□□□□□ -0.88
PRPF40A-206ENST00000471167 CABP4P57796 275 aa9.55□□□□□ -0.88
PRPF40A-206ENST00000471167 C19orf57Q0VDD7 668 aa9.55□□□□□ -0.88
PRPF40A-206ENST00000471167 DUOXA2Q1HG44 320 aa9.55□□□□□ -0.88
PRPF40A-206ENST00000471167 FAM117BQ6P1L5 589 aa9.55□□□□□ -0.88
PRPF40A-206ENST00000471167 SETDB2Q96T68 719 aa9.55□□□□□ -0.88
PRPF40A-206ENST00000471167 ABCB6Q9NP58 842 aa9.55□□□□□ -0.88
PRPF40A-206ENST00000471167 CTSBP07858 339 aa9.54□□□□□ -0.88
PRPF40A-206ENST00000471167 NEFLP07196 543 aa9.53□□□□□ -0.88
PRPF40A-206ENST00000471167 GLB1P16278 677 aa9.53□□□□□ -0.88
PRPF40A-206ENST00000471167 ITPKAP23677 461 aa9.53□□□□□ -0.88
PRPF40A-206ENST00000471167 MAPK1P28482 360 aa9.53□□□□□ -0.88
PRPF40A-206ENST00000471167 GRM2Q14416 872 aa9.53□□□□□ -0.88
PRPF40A-206ENST00000471167 PRR23CQ6ZRP0 262 aa9.53□□□□□ -0.88
PRPF40A-206ENST00000471167 FAM46AQ96IP4 442 aaKnown RBP9.53□□□□□ -0.88
PRPF40A-206ENST00000471167 SOX17Q9H6I2 414 aaPredicted RBP9.53□□□□□ -0.88
PRPF40A-206ENST00000471167 LOC100289279A0A1B0GTE1 492 aa9.52□□□□□ -0.89
PRPF40A-206ENST00000471167 PCDH1Q08174 1060 aa9.52□□□□□ -0.89
PRPF40A-206ENST00000471167 DCAF11Q8TEB1 546 aa9.52□□□□□ -0.89
PRPF40A-206ENST00000471167 EHD4Q9H223 541 aa9.52□□□□□ -0.89
PRPF40A-206ENST00000471167 CLEC4MQ9H2X3 399 aaPredicted RBP9.52□□□□□ -0.89
PRPF40A-206ENST00000471167 ZNF576Q9H609 170 aa9.52□□□□□ -0.89
PRPF40A-206ENST00000471167 FAAP100Q0VG06 881 aa9.51□□□□□ -0.89
PRPF40A-206ENST00000471167 ENOX2Q16206 610 aaKnown RBP9.51□□□□□ -0.89
PRPF40A-206ENST00000471167 PRPF40BQ6NWY9 871 aaKnown RBP9.51□□□□□ -0.89
PRPF40A-206ENST00000471167 TRIM56Q9BRZ2 755 aaKnown RBP9.51□□□□□ -0.89
PRPF40A-206ENST00000471167 MEGF11A6BM72 1044 aa9.5□□□□□ -0.89
PRPF40A-206ENST00000471167 ECEL1O95672 775 aa9.5□□□□□ -0.89
PRPF40A-206ENST00000471167 TMPRSS13Q9BYE2 586 aa9.5□□□□□ -0.89
PRPF40A-206ENST00000471167 TMEM238LA0A1B0GVL6 79 aa9.49□□□□□ -0.89
PRPF40A-206ENST00000471167 FAM177BA6PVY3 158 aa9.49□□□□□ -0.89
PRPF40A-206ENST00000471167 PREPP48147 710 aa9.49□□□□□ -0.89
PRPF40A-206ENST00000471167 PLCB3Q01970 1234 aa9.49□□□□□ -0.89
PRPF40A-206ENST00000471167 FMR1Q06787 632 aaKnown RBP eCLIP9.49□□□□□ -0.89
PRPF40A-206ENST00000471167 WWC3Q9ULE0 1092 aa9.49□□□□□ -0.89
PRPF40A-206ENST00000471167 PNMA6FA0A0J9YX94 578 aa9.48□□□□□ -0.89
PRPF40A-206ENST00000471167 B3GALT4O96024 378 aa9.48□□□□□ -0.89
PRPF40A-206ENST00000471167 GSTM4Q03013 218 aa9.48□□□□□ -0.89
PRPF40A-206ENST00000471167 ASB16Q96NS5 453 aa9.48□□□□□ -0.89
PRPF40A-206ENST00000471167 RUSC1Q9BVN2 902 aa9.48□□□□□ -0.89
PRPF40A-206ENST00000471167 USP26Q9BXU7 913 aa9.47□□□□□ -0.89
PRPF40A-206ENST00000471167 GADD45BO75293 160 aaPredicted RBP9.46□□□□□ -0.9
PRPF40A-206ENST00000471167 TIAF1O95411 115 aa9.46□□□□□ -0.9
PRPF40A-206ENST00000471167 ARL4DP49703 201 aa9.46□□□□□ -0.9
PRPF40A-206ENST00000471167 PTPN12Q05209 780 aaKnown RBP9.46□□□□□ -0.9
PRPF40A-206ENST00000471167 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.46□□□□□ -0.9
PRPF40A-206ENST00000471167 RNF208Q9H0X6 261 aa9.46□□□□□ -0.9
PRPF40A-206ENST00000471167 MYRFLQ96LU7 910 aa9.45□□□□□ -0.9
PRPF40A-206ENST00000471167 BCO2Q9BYV7 579 aa9.45□□□□□ -0.9
PRPF40A-206ENST00000471167 DRD2P14416 443 aa9.44□□□□□ -0.9
PRPF40A-206ENST00000471167 MAOBP27338 520 aa9.44□□□□□ -0.9
PRPF40A-206ENST00000471167 ZMYM1Q5SVZ6 1142 aa9.44□□□□□ -0.9
PRPF40A-206ENST00000471167 NXPE4Q6UWF7 544 aa9.44□□□□□ -0.9
PRPF40A-206ENST00000471167 Q8N3U1 123 aa9.44□□□□□ -0.9
PRPF40A-206ENST00000471167 SMG8Q8ND04 991 aaKnown RBP9.44□□□□□ -0.9
PRPF40A-206ENST00000471167 CEP41Q9BYV8 373 aa9.44□□□□□ -0.9
PRPF40A-206ENST00000471167 OSBPL7Q9BZF2 842 aa9.44□□□□□ -0.9
PRPF40A-206ENST00000471167 FSTP19883 344 aa9.43□□□□□ -0.9
PRPF40A-206ENST00000471167 ZNF157P51786 506 aaPredicted RBP9.43□□□□□ -0.9
PRPF40A-206ENST00000471167 ANKRD34AQ69YU3 496 aa9.43□□□□□ -0.9
PRPF40A-206ENST00000471167 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.43□□□□□ -0.9
PRPF40A-206ENST00000471167 FAM20CQ8IXL6 584 aa9.43□□□□□ -0.9
PRPF40A-206ENST00000471167 C3orf58Q8NDZ4 430 aa9.43□□□□□ -0.9
PRPF40A-206ENST00000471167 SUGCTQ9HAC7 445 aa9.43□□□□□ -0.9
PRPF40A-206ENST00000471167 RAXQ9Y2V3 346 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms