RNA–Protein interactions for RNA: ENST00000471030.1

LSMEM1-204, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 3

Gene LSMEM1, Length 483 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-204ENST00000471030 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.51□□□□□ -1.21
LSMEM1-204ENST00000471030 ZNF496Q96IT1 587 aaPredicted RBP7.51□□□□□ -1.21
LSMEM1-204ENST00000471030 TTC14Q96N46 770 aa7.51□□□□□ -1.21
LSMEM1-204ENST00000471030 PPP1R9BQ96SB3 815 aa7.51□□□□□ -1.21
LSMEM1-204ENST00000471030 MYD88Q99836 296 aa7.51□□□□□ -1.21
LSMEM1-204ENST00000471030 CWC25Q9NXE8 425 aaPredicted RBP7.51□□□□□ -1.21
LSMEM1-204ENST00000471030 PALD1Q9ULE6 856 aa7.51□□□□□ -1.21
LSMEM1-204ENST00000471030 SOS2Q07890 1332 aaPredicted RBP7.51□□□□□ -1.21
LSMEM1-204ENST00000471030 A0A087WZG4 1122 aa7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 CYP27B1O15528 508 aa7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 STX6O43752 255 aa7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 ANXA1P04083 346 aa7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 ZSCAN22P10073 491 aaPredicted RBP7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 HSP90B1P14625 803 aaKnown RBP7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 IL2RBP14784 551 aa7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 CASTP20810 708 aaKnown RBP7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 SLC19A1P41440 591 aa7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 UBE2HP62256 183 aa7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 TRIM28Q13263 835 aaKnown RBP7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 LAPTM4AQ15012 233 aa7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 NECTIN1Q15223 517 aa7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 UVSSAQ2YD98 709 aa7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 HSP90AB3PQ58FF7 597 aa7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 CAVIN1Q6NZI2 390 aaKnown RBP7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 BLOC1S2Q6QNY1 142 aa7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 LRSAM1Q6UWE0 723 aa7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 TOM1L2Q6ZVM7 507 aa7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 ZGPATQ8N5A5 531 aaKnown RBP7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 FAM160A2Q8N612 972 aaPredicted RBP7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 JAKMIP1Q96N16 626 aaKnown RBP7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 AKAP2Q9Y2D5 859 aa7.5□□□□□ -1.21
LSMEM1-204ENST00000471030 ABCC12Q96J65 1359 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 MEGF6O75095 1541 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 H7C1W4 665 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 SASH1O94885 1247 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 ZFYP08048 801 aaPredicted RBP7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 MYL6BP14649 208 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 JUNDP17535 347 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 NDUFV2P19404 249 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 CLK2P49760 499 aaKnown RBP7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 MMP16P51512 607 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 AK2P54819 239 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 GUCA2AQ02747 115 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 TNNI3KQ59H18 835 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 MYSM1Q5VVJ2 828 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 USPL1Q5W0Q7 1092 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 CREB3L3Q68CJ9 461 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 DESI1Q6ICB0 168 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 LRP10Q7Z4F1 713 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 RGS22Q8NE09 1264 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 EAF2Q96CJ1 260 aaPredicted RBP7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 KAZALD1Q96I82 304 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 HAUS7Q99871 368 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 UPF3BQ9BZI7 483 aaKnown RBP7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 GPBP1L1Q9HC44 474 aaPredicted RBP7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 HELLSQ9NRZ9 838 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 SLAIN2Q9P270 581 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 ZDHHC9Q9Y397 364 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 RBM8AQ9Y5S9 174 aaKnown RBP7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 FPGT-TNNI3KV9GXZ4 949 aa7.49□□□□□ -1.21
LSMEM1-204ENST00000471030 NUTM2BA6NNL0 878 aaPredicted RBP7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 ESPNB1AK53 854 aa7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 NUTM2EB1AL46 878 aaPredicted RBP7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 DXOO77932 396 aaKnown RBP7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 STARD3NLO95772 234 aa7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 RPIAP49247 311 aa7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 EVA1CP58658 441 aa7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 PTPN12Q05209 780 aaKnown RBP7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 SLC39A6Q13433 755 aa7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 MCMDC2Q4G0Z9 681 aa7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 CCDC183Q5T5S1 534 aa7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 ATL3Q6DD88 541 aa7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 PRPF40BQ6NWY9 871 aaKnown RBP7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 BRINP3Q76B58 766 aa7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 NUTM2AQ8IVF1 878 aaPredicted RBP7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 HLA-CQ95604 372 aa7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 LLPHQ9BRT6 129 aaKnown RBP7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 CDCA7Q9BWT1 371 aaPredicted RBP7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 SCAND2PQ9GZW5 306 aaPredicted RBP7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 CTNNA3Q9UI47 895 aa7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 FCF1Q9Y324 198 aaKnown RBP7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 USP16Q9Y5T5 823 aa7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 SIPA1L3O60292 1781 aaPredicted RBP7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 SH3TC1Q8TE82 1336 aa7.48□□□□□ -1.21
LSMEM1-204ENST00000471030 RPAP1Q9BWH6 1393 aaPredicted RBP7.47□□□□□ -1.21
LSMEM1-204ENST00000471030 JCADQ9P266 1359 aa7.47□□□□□ -1.21
LSMEM1-204ENST00000471030 MED23Q9ULK4 1368 aa7.47□□□□□ -1.21
LSMEM1-204ENST00000471030 PARP4Q9UKK3 1724 aaKnown RBP7.47□□□□□ -1.21
LSMEM1-204ENST00000471030 CRYBG1Q9Y4K1 1723 aa7.47□□□□□ -1.21
LSMEM1-204ENST00000471030 SLC27A2O14975 620 aa7.47□□□□□ -1.21
LSMEM1-204ENST00000471030 CAVIN2O95810 425 aa7.47□□□□□ -1.21
LSMEM1-204ENST00000471030 F13A1P00488 732 aa7.47□□□□□ -1.21
LSMEM1-204ENST00000471030 SYT1P21579 422 aa7.47□□□□□ -1.21
LSMEM1-204ENST00000471030 RPS6KB1P23443 525 aa7.47□□□□□ -1.21
LSMEM1-204ENST00000471030 MSNP26038 577 aaKnown RBP7.47□□□□□ -1.21
LSMEM1-204ENST00000471030 RFX5P48382 616 aaPredicted RBP7.47□□□□□ -1.21
LSMEM1-204ENST00000471030 NMIQ13287 307 aaPredicted RBP7.47□□□□□ -1.21
LSMEM1-204ENST00000471030 SKIV2LQ15477 1246 aaKnown RBP7.47□□□□□ -1.21
LSMEM1-204ENST00000471030 SH3D19Q5HYK7 790 aa7.47□□□□□ -1.21
LSMEM1-204ENST00000471030 KIF6Q6ZMV9 814 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms