RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 C9orf50Q5SZB4 431 aa7.87□□□□□ -1.15
VARS-222ENST00000470953 TTLL7Q6ZT98 887 aa7.87□□□□□ -1.15
VARS-222ENST00000470953 MS4A4AQ96JQ5 239 aa7.87□□□□□ -1.15
VARS-222ENST00000470953 PAK6Q9NQU5 681 aaPredicted RBP7.87□□□□□ -1.15
VARS-222ENST00000470953 NUP98P52948 1817 aa7.87□□□□□ -1.15
VARS-222ENST00000470953 REV3LO60673 3130 aa7.87□□□□□ -1.15
VARS-222ENST00000470953 TLR2O60603 784 aa7.86□□□□□ -1.15
VARS-222ENST00000470953 BBOX1O75936 387 aa7.86□□□□□ -1.15
VARS-222ENST00000470953 INHAP05111 366 aa7.86□□□□□ -1.15
VARS-222ENST00000470953 TFF2Q03403 129 aa7.86□□□□□ -1.15
VARS-222ENST00000470953 PRKCZQ05513 592 aa7.86□□□□□ -1.15
VARS-222ENST00000470953 WASHC4Q2M389 1173 aa7.86□□□□□ -1.15
VARS-222ENST00000470953 SLAIN1Q8ND83 568 aa7.86□□□□□ -1.15
VARS-222ENST00000470953 UIMC1Q96RL1 719 aa7.86□□□□□ -1.15
VARS-222ENST00000470953 NBPF3Q9H094 633 aa7.86□□□□□ -1.15
VARS-222ENST00000470953 C11orf49Q9H6J7 331 aa7.86□□□□□ -1.15
VARS-222ENST00000470953 POLLQ9UGP5 575 aa7.86□□□□□ -1.15
VARS-222ENST00000470953 CEMIPQ8WUJ3 1361 aa7.85□□□□□ -1.15
VARS-222ENST00000470953 PFASO15067 1338 aa7.85□□□□□ -1.15
VARS-222ENST00000470953 ADGRA2Q96PE1 1338 aa7.85□□□□□ -1.15
VARS-222ENST00000470953 GNAT3A8MTJ3 354 aa7.85□□□□□ -1.15
VARS-222ENST00000470953 SNRPA1P09661 255 aaKnown RBP7.85□□□□□ -1.15
VARS-222ENST00000470953 HSPA5P11021 654 aaKnown RBP7.85□□□□□ -1.15
VARS-222ENST00000470953 ELNP15502 786 aa7.85□□□□□ -1.15
VARS-222ENST00000470953 CAPN2P17655 700 aa7.85□□□□□ -1.15
VARS-222ENST00000470953 PDE3AQ14432 1141 aa7.85□□□□□ -1.15
VARS-222ENST00000470953 ERMP1Q7Z2K6 904 aa7.85□□□□□ -1.15
VARS-222ENST00000470953 PODNQ7Z5L7 613 aa7.85□□□□□ -1.15
VARS-222ENST00000470953 ZNF34Q8IZ26 560 aa7.85□□□□□ -1.15
VARS-222ENST00000470953 ZBTB38Q8NAP3 1195 aaPredicted RBP7.85□□□□□ -1.15
VARS-222ENST00000470953 NLRP3Q96P20 1036 aa7.85□□□□□ -1.15
VARS-222ENST00000470953 ZBTB3Q9H5J0 574 aa7.85□□□□□ -1.15
VARS-222ENST00000470953 COL4A1P02462 1669 aa7.85□□□□□ -1.15
VARS-222ENST00000470953 CHD6Q8TD26 2715 aa7.85□□□□□ -1.15
VARS-222ENST00000470953 IBTKQ9P2D0 1353 aaPredicted RBP7.84□□□□□ -1.15
VARS-222ENST00000470953 MAP3K15Q6ZN16 1313 aa7.84□□□□□ -1.15
VARS-222ENST00000470953 SETXQ7Z333 2677 aaKnown RBP7.84□□□□□ -1.15
VARS-222ENST00000470953 CCL15-CCL14A0A0B4J2E2 113 aa7.84□□□□□ -1.15
VARS-222ENST00000470953 ERVV-1B6SEH8 477 aa7.84□□□□□ -1.15
VARS-222ENST00000470953 PI4K2BG5E9Z4 385 aa7.84□□□□□ -1.15
VARS-222ENST00000470953 FMNL1O95466 1100 aaPredicted RBP7.84□□□□□ -1.15
VARS-222ENST00000470953 HCLS1P14317 486 aaPredicted RBP7.84□□□□□ -1.15
VARS-222ENST00000470953 HOXD10P28358 340 aa7.84□□□□□ -1.15
VARS-222ENST00000470953 CCL15Q16663 113 aa7.84□□□□□ -1.15
VARS-222ENST00000470953 SLC10A5Q5PT55 438 aa7.84□□□□□ -1.15
VARS-222ENST00000470953 AKNAD1Q5T1N1 836 aa7.84□□□□□ -1.15
VARS-222ENST00000470953 MORC1Q86VD1 984 aa7.84□□□□□ -1.15
VARS-222ENST00000470953 ANKLE1Q8NAG6 615 aa7.84□□□□□ -1.15
VARS-222ENST00000470953 ANKS1AQ92625 1134 aa7.84□□□□□ -1.15
VARS-222ENST00000470953 LBHD1Q9BQE6 289 aaPredicted RBP7.84□□□□□ -1.15
VARS-222ENST00000470953 IGSF5Q9NSI5 407 aa7.84□□□□□ -1.15
VARS-222ENST00000470953 CXXC1Q9P0U4 656 aaPredicted RBP7.84□□□□□ -1.15
VARS-222ENST00000470953 GABRQQ9UN88 632 aa7.84□□□□□ -1.15
VARS-222ENST00000470953 OTOFQ9HC10 1997 aa7.84□□□□□ -1.15
VARS-222ENST00000470953 LTBP2Q14767 1821 aa7.83□□□□□ -1.16
VARS-222ENST00000470953 ADCY3O60266 1144 aa7.83□□□□□ -1.16
VARS-222ENST00000470953 USP17L8P0C7I0 530 aa7.83□□□□□ -1.16
VARS-222ENST00000470953 GPSM2P81274 684 aa7.83□□□□□ -1.16
VARS-222ENST00000470953 GRAPQ13588 217 aa7.83□□□□□ -1.16
VARS-222ENST00000470953 LRRC26Q2I0M4 334 aa7.83□□□□□ -1.16
VARS-222ENST00000470953 RSBN1LQ6PCB5 846 aaPredicted RBP7.83□□□□□ -1.16
VARS-222ENST00000470953 GRAPLQ8TC17 118 aaPredicted RBP7.83□□□□□ -1.16
VARS-222ENST00000470953 ZNF428Q96B54 188 aa7.83□□□□□ -1.16
VARS-222ENST00000470953 OPTNQ96CV9 577 aa7.83□□□□□ -1.16
VARS-222ENST00000470953 GMLQ99445 158 aa7.83□□□□□ -1.16
VARS-222ENST00000470953 CPA4Q9UI42 421 aa7.83□□□□□ -1.16
VARS-222ENST00000470953 LRRC37AA6NMS7 1700 aa7.83□□□□□ -1.16
VARS-222ENST00000470953 C6orf229H3BNL8 230 aa7.82□□□□□ -1.16
VARS-222ENST00000470953 WNT10BO00744 389 aa7.82□□□□□ -1.16
VARS-222ENST00000470953 AGBL3Q8NEM8 1001 aa7.82□□□□□ -1.16
VARS-222ENST00000470953 NECTIN2Q92692 538 aa7.82□□□□□ -1.16
VARS-222ENST00000470953 GAS2L1Q99501 681 aaPredicted RBP7.82□□□□□ -1.16
VARS-222ENST00000470953 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.82□□□□□ -1.16
VARS-222ENST00000470953 KCNH6Q9H252 994 aa7.82□□□□□ -1.16
VARS-222ENST00000470953 PANK3Q9H999 370 aa7.82□□□□□ -1.16
VARS-222ENST00000470953 ELP3Q9H9T3 547 aa7.82□□□□□ -1.16
VARS-222ENST00000470953 NSFL1CQ9UNZ2 370 aaKnown RBP7.82□□□□□ -1.16
VARS-222ENST00000470953 LRRC37A2A6NM11 1700 aa7.81□□□□□ -1.16
VARS-222ENST00000470953 PSME4Q14997 1843 aa7.81□□□□□ -1.16
VARS-222ENST00000470953 GFRA3O60609 400 aa7.81□□□□□ -1.16
VARS-222ENST00000470953 SASH1O94885 1247 aa7.81□□□□□ -1.16
VARS-222ENST00000470953 MYL6BP14649 208 aa7.81□□□□□ -1.16
VARS-222ENST00000470953 ADGRE1Q14246 886 aa7.81□□□□□ -1.16
VARS-222ENST00000470953 C17orf99Q6UX52 265 aa7.81□□□□□ -1.16
VARS-222ENST00000470953 DDX46Q7L014 1031 aaKnown RBP7.81□□□□□ -1.16
VARS-222ENST00000470953 CELF1Q92879 486 aaKnown RBP7.81□□□□□ -1.16
VARS-222ENST00000470953 PHACTR3Q96KR7 559 aa7.81□□□□□ -1.16
VARS-222ENST00000470953 CNTNAP3BQ96NU0 1288 aa7.81□□□□□ -1.16
VARS-222ENST00000470953 UTP14AQ9BVJ6 771 aaKnown RBP7.81□□□□□ -1.16
VARS-222ENST00000470953 MXD3Q9BW11 206 aa7.81□□□□□ -1.16
VARS-222ENST00000470953 CNTNAP3Q9BZ76 1288 aa7.81□□□□□ -1.16
VARS-222ENST00000470953 MIS18AQ9NYP9 233 aa7.81□□□□□ -1.16
VARS-222ENST00000470953 RRP7AQ9Y3A4 280 aaKnown RBP7.81□□□□□ -1.16
VARS-222ENST00000470953 MYO15AQ9UKN7 3530 aa7.81□□□□□ -1.16
VARS-222ENST00000470953 ZFHX2Q9C0A1 2572 aaPredicted RBP7.8□□□□□ -1.16
VARS-222ENST00000470953 DNAH12Q6ZR08 3092 aa7.8□□□□□ -1.16
VARS-222ENST00000470953 ZNF318Q5VUA4 2279 aa7.8□□□□□ -1.16
VARS-222ENST00000470953 GIGYF2Q6Y7W6 1299 aaKnown RBP7.8□□□□□ -1.16
VARS-222ENST00000470953 KIF6Q6ZMV9 814 aa7.8□□□□□ -1.16
VARS-222ENST00000470953 MCM10Q7L590 875 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms