RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 SPRYD7Q5W111 196 aa17.62■□□□□ 0.41
SEMA3F-208ENST00000470737 C15orf52Q6ZUT6 534 aaKnown RBP17.62■□□□□ 0.41
SEMA3F-208ENST00000470737 MTMR14Q8NCE2 650 aa17.62■□□□□ 0.41
SEMA3F-208ENST00000470737 HELBQ8NG08 1087 aaPredicted RBP17.62■□□□□ 0.41
SEMA3F-208ENST00000470737 SLC10A4Q96EP9 437 aa17.62■□□□□ 0.41
SEMA3F-208ENST00000470737 MANSC4A6NHS7 340 aaPredicted RBP17.61■□□□□ 0.41
SEMA3F-208ENST00000470737 F8W031 263 aaPredicted RBP17.61■□□□□ 0.41
SEMA3F-208ENST00000470737 INHBEP58166 350 aa17.61■□□□□ 0.41
SEMA3F-208ENST00000470737 LDLRAD1Q5T700 205 aa17.61■□□□□ 0.41
SEMA3F-208ENST00000470737 FBXO46Q6PJ61 603 aaPredicted RBP17.61■□□□□ 0.41
SEMA3F-208ENST00000470737 CFHR5Q9BXR6 569 aa17.61■□□□□ 0.41
SEMA3F-208ENST00000470737 SNAP23O00161 211 aa17.6■□□□□ 0.41
SEMA3F-208ENST00000470737 RBM5P52756 815 aaKnown RBP eCLIP17.6■□□□□ 0.41
SEMA3F-208ENST00000470737 CCDC57Q2TAC2 916 aa17.6■□□□□ 0.41
SEMA3F-208ENST00000470737 SUPT20HL1Q3ZLR7 823 aa17.6■□□□□ 0.41
SEMA3F-208ENST00000470737 CFAP100Q494V2 611 aa17.6■□□□□ 0.41
SEMA3F-208ENST00000470737 WDR63Q8IWG1 891 aa17.6■□□□□ 0.41
SEMA3F-208ENST00000470737 VEZTQ9HBM0 779 aa17.6■□□□□ 0.41
SEMA3F-208ENST00000470737 MRS2Q9HD23 443 aa17.6■□□□□ 0.41
SEMA3F-208ENST00000470737 CNNM1Q9NRU3 951 aa17.6■□□□□ 0.41
SEMA3F-208ENST00000470737 SALL2Q9Y467 1007 aaPredicted RBP17.6■□□□□ 0.41
SEMA3F-208ENST00000470737 PLIN1O60240 522 aa17.59■□□□□ 0.41
SEMA3F-208ENST00000470737 VAMP4O75379 141 aa17.59■□□□□ 0.41
SEMA3F-208ENST00000470737 IL1R1P14778 569 aa17.59■□□□□ 0.41
SEMA3F-208ENST00000470737 FKBP1AP62942 108 aaKnown RBP17.59■□□□□ 0.41
SEMA3F-208ENST00000470737 FOXO4P98177 505 aa17.59■□□□□ 0.41
SEMA3F-208ENST00000470737 EXOSC9Q06265 439 aaKnown RBP17.59■□□□□ 0.41
SEMA3F-208ENST00000470737 CERS5Q8N5B7 392 aa17.59■□□□□ 0.41
SEMA3F-208ENST00000470737 CLRN2A0PK11 232 aa17.58■□□□□ 0.4
SEMA3F-208ENST00000470737 SPDYE2BA6NHP3 402 aa17.58■□□□□ 0.4
SEMA3F-208ENST00000470737 F6X3S4 739 aa17.58■□□□□ 0.4
SEMA3F-208ENST00000470737 SPDYE6P0CI01 402 aa17.58■□□□□ 0.4
SEMA3F-208ENST00000470737 ZBTB48P10074 688 aaPredicted RBP17.58■□□□□ 0.4
SEMA3F-208ENST00000470737 IREB2P48200 963 aaKnown RBP17.58■□□□□ 0.4
SEMA3F-208ENST00000470737 MAP3K11Q16584 847 aa17.58■□□□□ 0.4
SEMA3F-208ENST00000470737 LMBR1LQ6UX01 489 aa17.58■□□□□ 0.4
SEMA3F-208ENST00000470737 LDHAL6AQ6ZMR3 332 aa17.58■□□□□ 0.4
SEMA3F-208ENST00000470737 C9orf78Q9NZ63 289 aaPredicted RBP17.58■□□□□ 0.4
SEMA3F-208ENST00000470737 FZD1Q9UP38 647 aa17.58■□□□□ 0.4
SEMA3F-208ENST00000470737 IRS2Q9Y4H2 1338 aa17.57■□□□□ 0.4
SEMA3F-208ENST00000470737 UNCXA6NJT0 531 aa17.57■□□□□ 0.4
SEMA3F-208ENST00000470737 BEND3Q5T5X7 828 aa17.57■□□□□ 0.4
SEMA3F-208ENST00000470737 PRPF38BQ5VTL8 546 aaKnown RBP17.57■□□□□ 0.4
SEMA3F-208ENST00000470737 WNK4Q96J92 1243 aa17.57■□□□□ 0.4
SEMA3F-208ENST00000470737 GRM8O00222 908 aa17.56■□□□□ 0.4
SEMA3F-208ENST00000470737 OTUD7BQ6GQQ9 843 aa17.56■□□□□ 0.4
SEMA3F-208ENST00000470737 IFNL1Q8IU54 200 aa17.56■□□□□ 0.4
SEMA3F-208ENST00000470737 JAG2Q9Y219 1238 aa17.56■□□□□ 0.4
SEMA3F-208ENST00000470737 TNFAIP1Q13829 316 aa17.55■□□□□ 0.4
SEMA3F-208ENST00000470737 ZNF594Q96JF6 807 aaPredicted RBP17.55■□□□□ 0.4
SEMA3F-208ENST00000470737 CLMNQ96JQ2 1002 aa17.55■□□□□ 0.4
SEMA3F-208ENST00000470737 PRMT6Q96LA8 375 aaPredicted RBP17.55■□□□□ 0.4
SEMA3F-208ENST00000470737 R3HDMLQ9H3Y0 253 aa17.55■□□□□ 0.4
SEMA3F-208ENST00000470737 PCDH10Q9P2E7 1040 aa17.55■□□□□ 0.4
SEMA3F-208ENST00000470737 TRIM17Q9Y577 477 aa17.55■□□□□ 0.4
SEMA3F-208ENST00000470737 PCDHAC2Q9Y5I4 1007 aa17.55■□□□□ 0.4
SEMA3F-208ENST00000470737 SSC5DA1L4H1 1573 aa17.54■□□□□ 0.4
SEMA3F-208ENST00000470737 LAMB1P07942 1786 aa17.54■□□□□ 0.4
SEMA3F-208ENST00000470737 NBPF12Q5TAG4 269 aaPredicted RBP17.54■□□□□ 0.4
SEMA3F-208ENST00000470737 ANP32CO43423 234 aa17.53■□□□□ 0.4
SEMA3F-208ENST00000470737 ALDH1L1O75891 902 aa17.53■□□□□ 0.4
SEMA3F-208ENST00000470737 UBE4AQ14139 1066 aa17.53■□□□□ 0.4
SEMA3F-208ENST00000470737 RASA3Q14644 834 aa17.53■□□□□ 0.4
SEMA3F-208ENST00000470737 EPHA10Q5JZY3 1008 aa17.53■□□□□ 0.4
SEMA3F-208ENST00000470737 MFSD14BQ5SR56 506 aa17.53■□□□□ 0.4
SEMA3F-208ENST00000470737 SLC4A10Q6U841 1118 aa17.53■□□□□ 0.4
SEMA3F-208ENST00000470737 ANKRD13AQ8IZ07 590 aa17.53■□□□□ 0.4
SEMA3F-208ENST00000470737 ERO1AQ96HE7 468 aa17.53■□□□□ 0.4
SEMA3F-208ENST00000470737 SRCIN1Q9C0H9 1055 aa17.53■□□□□ 0.4
SEMA3F-208ENST00000470737 TTF2Q9UNY4 1162 aaKnown RBP17.53■□□□□ 0.4
SEMA3F-208ENST00000470737 FAM205AQ6ZU69 1335 aa17.52■□□□□ 0.4
SEMA3F-208ENST00000470737 HIBADHP31937 336 aaKnown RBP17.52■□□□□ 0.4
SEMA3F-208ENST00000470737 ARAP2Q8WZ64 1704 aa17.52■□□□□ 0.39
SEMA3F-208ENST00000470737 IGF2BP3O00425 579 aaKnown RBP eCLIP17.51■□□□□ 0.39
SEMA3F-208ENST00000470737 USP2O75604 605 aaPredicted RBP17.51■□□□□ 0.39
SEMA3F-208ENST00000470737 SPDYE2Q495Y8 402 aa17.51■□□□□ 0.39
SEMA3F-208ENST00000470737 INTS3Q68E01 1043 aaKnown RBP17.51■□□□□ 0.39
SEMA3F-208ENST00000470737 VPS37DQ86XT2 251 aa17.51■□□□□ 0.39
SEMA3F-208ENST00000470737 TDRD7Q8NHU6 1098 aaKnown RBP17.51■□□□□ 0.39
SEMA3F-208ENST00000470737 SERPINA10Q9UK55 444 aa17.51■□□□□ 0.39
SEMA3F-208ENST00000470737 GYG1P46976 350 aa17.5■□□□□ 0.39
SEMA3F-208ENST00000470737 TNNI2P48788 182 aa17.5■□□□□ 0.39
SEMA3F-208ENST00000470737 OTOP1Q7RTM1 612 aa17.5■□□□□ 0.39
SEMA3F-208ENST00000470737 ZNF70Q9UC06 446 aaPredicted RBP17.5■□□□□ 0.39
SEMA3F-208ENST00000470737 OTOFQ9HC10 1997 aa17.49■□□□□ 0.39
SEMA3F-208ENST00000470737 FRAT2O75474 233 aaPredicted RBP17.49■□□□□ 0.39
SEMA3F-208ENST00000470737 FAM84BQ96KN1 310 aaPredicted RBP17.49■□□□□ 0.39
SEMA3F-208ENST00000470737 TDRD3Q9H7E2 651 aaKnown RBP17.49■□□□□ 0.39
SEMA3F-208ENST00000470737 ELP3Q9H9T3 547 aa17.49■□□□□ 0.39
SEMA3F-208ENST00000470737 AOX1Q06278 1338 aa17.48■□□□□ 0.39
SEMA3F-208ENST00000470737 MROH5Q6ZUA9 1318 aa17.48■□□□□ 0.39
SEMA3F-208ENST00000470737 CRKP46108 304 aa17.48■□□□□ 0.39
SEMA3F-208ENST00000470737 CRHR2Q13324 411 aa17.48■□□□□ 0.39
SEMA3F-208ENST00000470737 DZIP1LQ8IYY4 767 aaKnown RBP17.48■□□□□ 0.39
SEMA3F-208ENST00000470737 CD99L2Q8TCZ2 262 aa17.48■□□□□ 0.39
SEMA3F-208ENST00000470737 OPTNQ96CV9 577 aa17.48■□□□□ 0.39
SEMA3F-208ENST00000470737 SUCLG2Q96I99 432 aa17.48■□□□□ 0.39
SEMA3F-208ENST00000470737 EFCC1Q9HA90 598 aa17.48■□□□□ 0.39
SEMA3F-208ENST00000470737 TCP10L2B9ZVM9 353 aa17.47■□□□□ 0.39
SEMA3F-208ENST00000470737 GJA5P36382 358 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms