RNA–Protein interactions for RNA: ENST00000470347.1

SYPL1-205, Transcript of synaptophysin like 1, humanhuman

TSL 3 BASIC

Gene SYPL1, Length 1,193 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-205ENST00000470347 RNF17Q9BXT8 1623 aaKnown RBP9.3□□□□□ -0.92
SYPL1-205ENST00000470347 CPS1P31327 1500 aa9.3□□□□□ -0.92
SYPL1-205ENST00000470347 ZNF644Q9H582 1327 aaPredicted RBP9.3□□□□□ -0.92
SYPL1-205ENST00000470347 ZC3H13Q5T200 1668 aaKnown RBP9.29□□□□□ -0.92
SYPL1-205ENST00000470347 NCOA2Q15596 1464 aa9.29□□□□□ -0.92
SYPL1-205ENST00000470347 USP17L15C9J2P7 530 aa9.29□□□□□ -0.92
SYPL1-205ENST00000470347 USP17L10C9JJH3 530 aa9.29□□□□□ -0.92
SYPL1-205ENST00000470347 USP17L13C9JLJ4 530 aa9.29□□□□□ -0.92
SYPL1-205ENST00000470347 USP17L12C9JPN9 530 aa9.29□□□□□ -0.92
SYPL1-205ENST00000470347 USP17L11C9JVI0 530 aa9.29□□□□□ -0.92
SYPL1-205ENST00000470347 USP17L21D6R901 530 aa9.29□□□□□ -0.92
SYPL1-205ENST00000470347 USP17L18D6R9N7 530 aa9.29□□□□□ -0.92
SYPL1-205ENST00000470347 USP17L22D6RA61 530 aa9.29□□□□□ -0.92
SYPL1-205ENST00000470347 USP17L17D6RBQ6 530 aa9.29□□□□□ -0.92
SYPL1-205ENST00000470347 USP17L19D6RCP7 530 aa9.29□□□□□ -0.92
SYPL1-205ENST00000470347 USP17L20D6RJB6 530 aa9.29□□□□□ -0.92
SYPL1-205ENST00000470347 MICAL2O94851 1124 aa9.29□□□□□ -0.92
SYPL1-205ENST00000470347 USP17L24Q0WX57 530 aa9.29□□□□□ -0.92
SYPL1-205ENST00000470347 MYO19Q96H55 970 aa9.29□□□□□ -0.92
SYPL1-205ENST00000470347 PPP1R12CQ9BZL4 782 aa9.29□□□□□ -0.92
SYPL1-205ENST00000470347 VWDEQ8N2E2 1590 aa9.29□□□□□ -0.92
SYPL1-205ENST00000470347 DEPDC5O75140 1603 aa9.28□□□□□ -0.92
SYPL1-205ENST00000470347 TNRQ92752 1358 aa9.28□□□□□ -0.92
SYPL1-205ENST00000470347 UBAP1LF5GYI3 381 aa9.28□□□□□ -0.92
SYPL1-205ENST00000470347 DLL1O00548 723 aa9.28□□□□□ -0.92
SYPL1-205ENST00000470347 WEE1P30291 646 aa9.28□□□□□ -0.92
SYPL1-205ENST00000470347 NRLP54845 237 aa9.28□□□□□ -0.92
SYPL1-205ENST00000470347 C11orf91Q3C1V1 193 aa9.28□□□□□ -0.92
SYPL1-205ENST00000470347 LCE3BQ5TA77 95 aa9.28□□□□□ -0.92
SYPL1-205ENST00000470347 PRR23CQ6ZRP0 262 aa9.28□□□□□ -0.92
SYPL1-205ENST00000470347 CLUAP1Q96AJ1 413 aa9.28□□□□□ -0.92
SYPL1-205ENST00000470347 SMG9Q9H0W8 520 aaKnown RBP9.28□□□□□ -0.92
SYPL1-205ENST00000470347 FOXO3O43524 673 aa9.27□□□□□ -0.93
SYPL1-205ENST00000470347 EGFRP00533 1210 aa9.27□□□□□ -0.93
SYPL1-205ENST00000470347 ARID4AP29374 1257 aaPredicted RBP9.27□□□□□ -0.93
SYPL1-205ENST00000470347 PROSER2Q86WR7 435 aaPredicted RBP9.27□□□□□ -0.93
SYPL1-205ENST00000470347 DZIP1LQ8IYY4 767 aaKnown RBP9.27□□□□□ -0.93
SYPL1-205ENST00000470347 ARXQ96QS3 562 aa9.27□□□□□ -0.93
SYPL1-205ENST00000470347 TLR7Q9NYK1 1049 aaKnown RBP9.27□□□□□ -0.93
SYPL1-205ENST00000470347 MED1Q15648 1581 aaPredicted RBP9.27□□□□□ -0.93
SYPL1-205ENST00000470347 MAST1Q9Y2H9 1570 aa9.27□□□□□ -0.93
SYPL1-205ENST00000470347 NLRP1Q9C000 1473 aa9.27□□□□□ -0.93
SYPL1-205ENST00000470347 EIF2AK4Q9P2K8 1649 aaKnown RBP9.27□□□□□ -0.93
SYPL1-205ENST00000470347 IQGAP1P46940 1657 aa9.26□□□□□ -0.93
SYPL1-205ENST00000470347 SYNMO15061 1565 aa9.26□□□□□ -0.93
SYPL1-205ENST00000470347 UGGT1Q9NYU2 1555 aa9.26□□□□□ -0.93
SYPL1-205ENST00000470347 OPLAHO14841 1288 aa9.26□□□□□ -0.93
SYPL1-205ENST00000470347 HFE2Q6ZVN8 426 aa9.26□□□□□ -0.93
SYPL1-205ENST00000470347 MROH1Q8NDA8 1641 aa9.26□□□□□ -0.93
SYPL1-205ENST00000470347 SHANK2Q9UPX8 1470 aa9.26□□□□□ -0.93
SYPL1-205ENST00000470347 ABCC3O15438 1527 aa9.26□□□□□ -0.93
SYPL1-205ENST00000470347 ALKQ9UM73 1620 aa9.25□□□□□ -0.93
SYPL1-205ENST00000470347 SLC51AQ86UW1 340 aa9.25□□□□□ -0.93
SYPL1-205ENST00000470347 VRTNQ9H8Y1 702 aa9.25□□□□□ -0.93
SYPL1-205ENST00000470347 RTCBQ9Y3I0 505 aaKnown RBP9.25□□□□□ -0.93
SYPL1-205ENST00000470347 MED14O60244 1454 aa9.25□□□□□ -0.93
SYPL1-205ENST00000470347 LOC105371045A0A1W2PR82 267 aa9.24□□□□□ -0.93
SYPL1-205ENST00000470347 EIF2AK2P19525 551 aaKnown RBP9.24□□□□□ -0.93
SYPL1-205ENST00000470347 TMEM130Q8N3G9 435 aa9.24□□□□□ -0.93
SYPL1-205ENST00000470347 AKTIPQ9H8T0 292 aa9.24□□□□□ -0.93
SYPL1-205ENST00000470347 LRFN2Q9ULH4 789 aa9.24□□□□□ -0.93
SYPL1-205ENST00000470347 NPHP4O75161 1426 aaPredicted RBP9.23□□□□□ -0.93
SYPL1-205ENST00000470347 MIA2Q96PC5 1412 aa9.23□□□□□ -0.93
SYPL1-205ENST00000470347 KIF3BO15066 747 aa9.23□□□□□ -0.93
SYPL1-205ENST00000470347 PLD4Q96BZ4 506 aa9.23□□□□□ -0.93
SYPL1-205ENST00000470347 CALR3Q96L12 384 aaKnown RBP9.23□□□□□ -0.93
SYPL1-205ENST00000470347 MRPL18Q9H0U6 180 aaKnown RBP9.23□□□□□ -0.93
SYPL1-205ENST00000470347 USP20Q9Y2K6 914 aa9.23□□□□□ -0.93
SYPL1-205ENST00000470347 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.23□□□□□ -0.932e-8■□□□□ 11
SYPL1-205ENST00000470347 CEP152O94986 1710 aa9.22□□□□□ -0.93
SYPL1-205ENST00000470347 ERVK-7P63135 1459 aa9.22□□□□□ -0.93
SYPL1-205ENST00000470347 STRCP1A6NGW2 1772 aa9.22□□□□□ -0.93
SYPL1-205ENST00000470347 LOC102724428A0A0B4J2F2 783 aa9.22□□□□□ -0.93
SYPL1-205ENST00000470347 SIK1P57059 783 aa9.22□□□□□ -0.93
SYPL1-205ENST00000470347 VTI1AQ96AJ9 217 aa9.22□□□□□ -0.93
SYPL1-205ENST00000470347 UBR1Q8IWV7 1749 aa9.22□□□□□ -0.93
SYPL1-205ENST00000470347 LRRC9Q6ZRR7 1453 aa9.21□□□□□ -0.93
SYPL1-205ENST00000470347 PRDM15P57071 1507 aaPredicted RBP9.21□□□□□ -0.93
SYPL1-205ENST00000470347 CROCC2H7BZ55 1655 aa9.21□□□□□ -0.93
SYPL1-205ENST00000470347 J3QW42 95 aa9.21□□□□□ -0.94
SYPL1-205ENST00000470347 XYLBO75191 536 aa9.21□□□□□ -0.94
SYPL1-205ENST00000470347 ALX3O95076 343 aa9.21□□□□□ -0.94
SYPL1-205ENST00000470347 HOXD8P13378 290 aaPredicted RBP9.21□□□□□ -0.94
SYPL1-205ENST00000470347 LMOD1P29536 600 aaPredicted RBP9.21□□□□□ -0.94
SYPL1-205ENST00000470347 SRA1Q9HD15 236 aaKnown RBP9.21□□□□□ -0.94
SYPL1-205ENST00000470347 WASHC2CQ9Y4E1 1318 aa9.21□□□□□ -0.94
SYPL1-205ENST00000470347 VPS8Q8N3P4 1428 aa9.21□□□□□ -0.94
SYPL1-205ENST00000470347 F8W735 103 aaPredicted RBP9.2□□□□□ -0.94
SYPL1-205ENST00000470347 FSTP19883 344 aa9.2□□□□□ -0.94
SYPL1-205ENST00000470347 HSPA1LP34931 641 aa9.2□□□□□ -0.94
SYPL1-205ENST00000470347 SOX18P35713 384 aa9.2□□□□□ -0.94
SYPL1-205ENST00000470347 TREML1Q86YW5 311 aa9.2□□□□□ -0.94
SYPL1-205ENST00000470347 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.2□□□□□ -0.943e-6■■■■■ 40.4
SYPL1-205ENST00000470347 KCNMB2Q9Y691 235 aa9.2□□□□□ -0.94
SYPL1-205ENST00000470347 MMP20O60882 483 aa9.19□□□□□ -0.94
SYPL1-205ENST00000470347 PSAPP07602 524 aa9.19□□□□□ -0.94
SYPL1-205ENST00000470347 SETDB1Q15047 1291 aa9.19□□□□□ -0.94
SYPL1-205ENST00000470347 Q6ZS46 218 aa9.19□□□□□ -0.94
SYPL1-205ENST00000470347 KRTAP19-1Q8IUB9 90 aa9.19□□□□□ -0.94
SYPL1-205ENST00000470347 RGL4Q8IZJ4 473 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms