RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 A0A0G2JLW4 131 aa11.86□□□□□ -0.51
SEMA4D-215ENST00000469653 DDX46Q7L014 1031 aaKnown RBP11.86□□□□□ -0.51
SEMA4D-215ENST00000469653 TMX3Q96JJ7 454 aa11.86□□□□□ -0.51
SEMA4D-215ENST00000469653 DLEC1Q9Y238 1755 aa11.86□□□□□ -0.51
SEMA4D-215ENST00000469653 TGFB2P61812 414 aa11.86□□□□□ -0.51
SEMA4D-215ENST00000469653 IFIT5Q13325 482 aaKnown RBP11.86□□□□□ -0.51
SEMA4D-215ENST00000469653 CCDC57Q2TAC2 916 aa11.86□□□□□ -0.51
SEMA4D-215ENST00000469653 RBM17Q96I25 401 aaKnown RBP11.86□□□□□ -0.51
SEMA4D-215ENST00000469653 FHDC1Q9C0D6 1143 aaPredicted RBP11.86□□□□□ -0.51
SEMA4D-215ENST00000469653 NPR1P16066 1061 aa11.86□□□□□ -0.51
SEMA4D-215ENST00000469653 DPEP1P16444 411 aa11.86□□□□□ -0.51
SEMA4D-215ENST00000469653 MTX1Q13505 466 aa11.86□□□□□ -0.51
SEMA4D-215ENST00000469653 RPAP2Q8IXW5 612 aaPredicted RBP11.86□□□□□ -0.51
SEMA4D-215ENST00000469653 MASTLQ96GX5 879 aa11.86□□□□□ -0.51
SEMA4D-215ENST00000469653 LRP5O75197 1615 aa11.85□□□□□ -0.51
SEMA4D-215ENST00000469653 GOLGB1Q14789 3259 aaKnown RBP11.85□□□□□ -0.51
SEMA4D-215ENST00000469653 ANKRD18BA2A2Z9 1011 aa11.85□□□□□ -0.51
SEMA4D-215ENST00000469653 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.85□□□□□ -0.51
SEMA4D-215ENST00000469653 COL4A1P02462 1669 aa11.85□□□□□ -0.51
SEMA4D-215ENST00000469653 RTL9Q8NET4 1388 aa11.85□□□□□ -0.51
SEMA4D-215ENST00000469653 NEK4P51957 841 aa11.85□□□□□ -0.51
SEMA4D-215ENST00000469653 ERC2O15083 957 aa11.85□□□□□ -0.51
SEMA4D-215ENST00000469653 REC8O95072 547 aa11.85□□□□□ -0.51
SEMA4D-215ENST00000469653 HOXA10P31260 410 aaPredicted RBP11.85□□□□□ -0.51
SEMA4D-215ENST00000469653 KLHDC4Q8TBB5 520 aa11.85□□□□□ -0.51
SEMA4D-215ENST00000469653 ZNF594Q96JF6 807 aaPredicted RBP11.85□□□□□ -0.51
SEMA4D-215ENST00000469653 KCNA3P22001 575 aa11.84□□□□□ -0.51
SEMA4D-215ENST00000469653 NLGN2Q8NFZ4 835 aa11.84□□□□□ -0.51
SEMA4D-215ENST00000469653 FBXW7Q969H0 707 aa11.84□□□□□ -0.51
SEMA4D-215ENST00000469653 IL1RAPL2Q9NP60 686 aa11.84□□□□□ -0.51
SEMA4D-215ENST00000469653 LOC102724159A0A0B4J2E5 919 aa11.84□□□□□ -0.51
SEMA4D-215ENST00000469653 PPFIA3O75145 1194 aa11.84□□□□□ -0.51
SEMA4D-215ENST00000469653 MBD3O95983 291 aa11.84□□□□□ -0.51
SEMA4D-215ENST00000469653 PWP2Q15269 919 aaKnown RBP11.84□□□□□ -0.51
SEMA4D-215ENST00000469653 STYK1Q6J9G0 422 aa11.84□□□□□ -0.51
SEMA4D-215ENST00000469653 CCDC82Q8N4S0 544 aa11.84□□□□□ -0.51
SEMA4D-215ENST00000469653 SPC24Q8NBT2 197 aa11.84□□□□□ -0.51
SEMA4D-215ENST00000469653 SSH3Q8TE77 659 aa11.84□□□□□ -0.51
SEMA4D-215ENST00000469653 CELF1Q92879 486 aaKnown RBP11.84□□□□□ -0.51
SEMA4D-215ENST00000469653 BRCA1P38398 1863 aaKnown RBP11.84□□□□□ -0.51
SEMA4D-215ENST00000469653 SPDYE4A6NLX3 237 aa11.83□□□□□ -0.51
SEMA4D-215ENST00000469653 RFX5P48382 616 aaPredicted RBP11.83□□□□□ -0.51
SEMA4D-215ENST00000469653 POLA2Q14181 598 aa11.83□□□□□ -0.51
SEMA4D-215ENST00000469653 CASC1Q6TDU7 716 aa11.83□□□□□ -0.51
SEMA4D-215ENST00000469653 CRAMP1Q96RY5 1269 aa11.83□□□□□ -0.51
SEMA4D-215ENST00000469653 CDC5LQ99459 802 aaKnown RBP11.83□□□□□ -0.51
SEMA4D-215ENST00000469653 ZBTB12Q9Y330 459 aaPredicted RBP11.83□□□□□ -0.51
SEMA4D-215ENST00000469653 GADD45BO75293 160 aaPredicted RBP11.83□□□□□ -0.52
SEMA4D-215ENST00000469653 ALDH1B1P30837 517 aa11.83□□□□□ -0.52
SEMA4D-215ENST00000469653 CBX1P83916 185 aa11.83□□□□□ -0.52
SEMA4D-215ENST00000469653 GRAPQ13588 217 aa11.83□□□□□ -0.52
SEMA4D-215ENST00000469653 GRAPLQ8TC17 118 aaPredicted RBP11.83□□□□□ -0.52
SEMA4D-215ENST00000469653 PALD1Q9ULE6 856 aa11.83□□□□□ -0.52
SEMA4D-215ENST00000469653 PA2G4Q9UQ80 394 aaKnown RBP11.83□□□□□ -0.52
SEMA4D-215ENST00000469653 SLX4Q8IY92 1834 aa11.83□□□□□ -0.52
SEMA4D-215ENST00000469653 HMMRO75330 724 aa11.83□□□□□ -0.52
SEMA4D-215ENST00000469653 RPS8P62241 208 aaKnown RBP11.83□□□□□ -0.52
SEMA4D-215ENST00000469653 ANKRD18AQ8IVF6 992 aa11.83□□□□□ -0.52
SEMA4D-215ENST00000469653 SYT17Q9BSW7 474 aa11.83□□□□□ -0.52
SEMA4D-215ENST00000469653 TSPY26PQ9H489 355 aa11.83□□□□□ -0.52
SEMA4D-215ENST00000469653 GPBP1L1Q9HC44 474 aaPredicted RBP11.83□□□□□ -0.52
SEMA4D-215ENST00000469653 WWC3Q9ULE0 1092 aa11.83□□□□□ -0.52
SEMA4D-215ENST00000469653 MAFGO15525 162 aa11.82□□□□□ -0.52
SEMA4D-215ENST00000469653 IGHMBP2P38935 993 aaKnown RBP11.82□□□□□ -0.52
SEMA4D-215ENST00000469653 PTPN12Q05209 780 aaKnown RBP11.82□□□□□ -0.52
SEMA4D-215ENST00000469653 CUL4AQ13619 759 aa11.82□□□□□ -0.52
SEMA4D-215ENST00000469653 TCHHQ07283 1943 aa11.82□□□□□ -0.52
SEMA4D-215ENST00000469653 HSP90AB4PQ58FF6 505 aa11.82□□□□□ -0.52
SEMA4D-215ENST00000469653 SMAP1Q8IYB5 467 aaPredicted RBP11.82□□□□□ -0.52
SEMA4D-215ENST00000469653 CNKSR1Q969H4 720 aa11.82□□□□□ -0.52
SEMA4D-215ENST00000469653 SIL1Q9H173 461 aa11.82□□□□□ -0.52
SEMA4D-215ENST00000469653 MTERF4Q7Z6M4 381 aaKnown RBP11.82□□□□□ -0.52
SEMA4D-215ENST00000469653 MPHOSPH8Q99549 860 aa11.82□□□□□ -0.52
SEMA4D-215ENST00000469653 PIM2Q9P1W9 311 aa11.82□□□□□ -0.52
SEMA4D-215ENST00000469653 KIAA2012Q0VF49 1180 aa11.81□□□□□ -0.52
SEMA4D-215ENST00000469653 TTLL6Q8N841 843 aa11.81□□□□□ -0.52
SEMA4D-215ENST00000469653 ANO2Q9NQ90 1003 aa11.81□□□□□ -0.52
SEMA4D-215ENST00000469653 BBOX1O75936 387 aa11.81□□□□□ -0.52
SEMA4D-215ENST00000469653 PDE1AP54750 535 aa11.81□□□□□ -0.52
SEMA4D-215ENST00000469653 PRPF40BQ6NWY9 871 aaKnown RBP11.81□□□□□ -0.52
SEMA4D-215ENST00000469653 LDHAL6AQ6ZMR3 332 aa11.81□□□□□ -0.52
SEMA4D-215ENST00000469653 ZNF710Q8N1W2 664 aa11.81□□□□□ -0.52
SEMA4D-215ENST00000469653 MYRIPQ8NFW9 859 aa11.81□□□□□ -0.52
SEMA4D-215ENST00000469653 PUS3Q9BZE2 481 aaKnown RBP11.81□□□□□ -0.52
SEMA4D-215ENST00000469653 COPRSQ9NQ92 184 aa11.81□□□□□ -0.52
SEMA4D-215ENST00000469653 PPEF1O14829 653 aaPredicted RBP11.8□□□□□ -0.52
SEMA4D-215ENST00000469653 SURF6O75683 361 aaKnown RBP11.8□□□□□ -0.52
SEMA4D-215ENST00000469653 LRRC24Q50LG9 513 aa11.8□□□□□ -0.52
SEMA4D-215ENST00000469653 CNNM1Q9NRU3 951 aa11.8□□□□□ -0.52
SEMA4D-215ENST00000469653 BSDC1Q9NW68 430 aaPredicted RBP11.8□□□□□ -0.52
SEMA4D-215ENST00000469653 ZNF219Q9P2Y4 722 aaPredicted RBP11.8□□□□□ -0.52
SEMA4D-215ENST00000469653 PEX14O75381 377 aa11.8□□□□□ -0.52
SEMA4D-215ENST00000469653 SLC51AQ86UW1 340 aa11.8□□□□□ -0.52
SEMA4D-215ENST00000469653 OSBPL3Q9H4L5 887 aa11.8□□□□□ -0.52
SEMA4D-215ENST00000469653 TTC12Q9H892 705 aaPredicted RBP11.8□□□□□ -0.52
SEMA4D-215ENST00000469653 G3BP1Q13283 466 aaKnown RBP eCLIP11.79□□□□□ -0.52
SEMA4D-215ENST00000469653 DALRD3Q5D0E6 543 aaKnown RBP11.79□□□□□ -0.52
SEMA4D-215ENST00000469653 CCDC94Q9BW85 323 aaPredicted RBP11.79□□□□□ -0.52
SEMA4D-215ENST00000469653 EYA2O00167 538 aa11.79□□□□□ -0.52
SEMA4D-215ENST00000469653 OLFM4Q6UX06 510 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms