RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 CRKLP46109 303 aaKnown RBP16.66■□□□□ 0.26
SMARCD3-205ENST00000469154 ZNF165P49910 485 aa16.66■□□□□ 0.26
SMARCD3-205ENST00000469154 ATL3Q6DD88 541 aa16.66■□□□□ 0.26
SMARCD3-205ENST00000469154 DRC7Q8IY82 874 aa16.66■□□□□ 0.26
SMARCD3-205ENST00000469154 TRIM5Q9C035 493 aa16.66■□□□□ 0.26
SMARCD3-205ENST00000469154 FOXO4P98177 505 aa16.65■□□□□ 0.26
SMARCD3-205ENST00000469154 AGXT2Q9BYV1 514 aa16.65■□□□□ 0.26
SMARCD3-205ENST00000469154 CCNL1Q9UK58 526 aaPredicted RBP16.65■□□□□ 0.26
SMARCD3-205ENST00000469154 CHGBP05060 677 aa16.65■□□□□ 0.26
SMARCD3-205ENST00000469154 CDC25BP30305 580 aa16.65■□□□□ 0.26
SMARCD3-205ENST00000469154 ZMYM1Q5SVZ6 1142 aa16.65■□□□□ 0.26
SMARCD3-205ENST00000469154 INTS5Q6P9B9 1019 aaKnown RBP16.65■□□□□ 0.26
SMARCD3-205ENST00000469154 ZMYND15Q9H091 742 aa16.65■□□□□ 0.26
SMARCD3-205ENST00000469154 DNAJC25Q9H1X3 360 aa16.65■□□□□ 0.26
SMARCD3-205ENST00000469154 CCDC87Q9NVE4 849 aa16.65■□□□□ 0.26
SMARCD3-205ENST00000469154 PTPDC1A2A3K4 754 aa16.64■□□□□ 0.25
SMARCD3-205ENST00000469154 GOLIM4O00461 696 aa16.64■□□□□ 0.25
SMARCD3-205ENST00000469154 IL15P40933 162 aaPredicted RBP16.64■□□□□ 0.25
SMARCD3-205ENST00000469154 ATG9AQ7Z3C6 839 aa16.64■□□□□ 0.25
SMARCD3-205ENST00000469154 CCDC186Q7Z3E2 898 aa16.64■□□□□ 0.25
SMARCD3-205ENST00000469154 LINC00116Q8NCU8 138 aa16.64■□□□□ 0.25
SMARCD3-205ENST00000469154 ZNF396Q96N95 335 aaPredicted RBP16.64■□□□□ 0.25
SMARCD3-205ENST00000469154 CCDC94Q9BW85 323 aaPredicted RBP16.64■□□□□ 0.25
SMARCD3-205ENST00000469154 LRRC2Q9BYS8 371 aa16.64■□□□□ 0.25
SMARCD3-205ENST00000469154 RCOR1Q9UKL0 485 aa16.64■□□□□ 0.25
SMARCD3-205ENST00000469154 EXOSC10Q01780 885 aaKnown RBP16.64■□□□□ 0.25
SMARCD3-205ENST00000469154 NEUROD6Q96NK8 337 aa16.64■□□□□ 0.25
SMARCD3-205ENST00000469154 ZBTB3Q9H5J0 574 aa16.64■□□□□ 0.25
SMARCD3-205ENST00000469154 CWC25Q9NXE8 425 aaPredicted RBP16.64■□□□□ 0.25
SMARCD3-205ENST00000469154 ADD1P35611 737 aaKnown RBP16.63■□□□□ 0.25
SMARCD3-205ENST00000469154 ZNF710Q8N1W2 664 aa16.63■□□□□ 0.25
SMARCD3-205ENST00000469154 APOBRQ0VD83 1088 aa16.62■□□□□ 0.25
SMARCD3-205ENST00000469154 STX1AQ16623 288 aa16.62■□□□□ 0.25
SMARCD3-205ENST00000469154 CCDC73Q6ZRK6 1079 aa16.62■□□□□ 0.25
SMARCD3-205ENST00000469154 SALL1Q9NSC2 1324 aa16.62■□□□□ 0.25
SMARCD3-205ENST00000469154 CTDNEP1O95476 244 aa16.62■□□□□ 0.25
SMARCD3-205ENST00000469154 SARM1Q6SZW1 724 aa16.62■□□□□ 0.25
SMARCD3-205ENST00000469154 CCAR1Q8IX12 1150 aaKnown RBP16.62■□□□□ 0.25
SMARCD3-205ENST00000469154 E7EWF7 191 aa16.61■□□□□ 0.25
SMARCD3-205ENST00000469154 GOLGA6L19H0YKK7 550 aa16.61■□□□□ 0.25
SMARCD3-205ENST00000469154 IL6STP40189 918 aaPredicted RBP16.61■□□□□ 0.25
SMARCD3-205ENST00000469154 ZSCAN25Q6NSZ9 544 aa16.61■□□□□ 0.25
SMARCD3-205ENST00000469154 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.61■□□□□ 0.25
SMARCD3-205ENST00000469154 ZNF274Q96GC6 653 aaPredicted RBP16.61■□□□□ 0.25
SMARCD3-205ENST00000469154 RIOK3O14730 519 aaKnown RBP16.61■□□□□ 0.25
SMARCD3-205ENST00000469154 RNF113AO15541 343 aaKnown RBP16.61■□□□□ 0.25
SMARCD3-205ENST00000469154 CLIP2Q9UDT6 1046 aa16.61■□□□□ 0.25
SMARCD3-205ENST00000469154 MAST3O60307 1309 aa16.6■□□□□ 0.25
SMARCD3-205ENST00000469154 EYA2O00167 538 aa16.6■□□□□ 0.25
SMARCD3-205ENST00000469154 CIAO1O76071 339 aa16.6■□□□□ 0.25
SMARCD3-205ENST00000469154 IFIT1P09914 478 aaKnown RBP16.6■□□□□ 0.25
SMARCD3-205ENST00000469154 HSPD1P10809 573 aaKnown RBP16.6■□□□□ 0.25
SMARCD3-205ENST00000469154 IQCB1Q15051 598 aa16.6■□□□□ 0.25
SMARCD3-205ENST00000469154 BCL2L12Q9HB09 334 aa16.6■□□□□ 0.25
SMARCD3-205ENST00000469154 DDX60Q8IY21 1712 aaKnown RBP16.6■□□□□ 0.25
SMARCD3-205ENST00000469154 MYH7P12883 1935 aa16.6■□□□□ 0.25
SMARCD3-205ENST00000469154 EIF5P55010 431 aaKnown RBP16.6■□□□□ 0.25
SMARCD3-205ENST00000469154 CEBPZQ03701 1054 aaKnown RBP16.6■□□□□ 0.25
SMARCD3-205ENST00000469154 KIF6Q6ZMV9 814 aa16.6■□□□□ 0.25
SMARCD3-205ENST00000469154 TSC1Q92574 1164 aa16.6■□□□□ 0.25
SMARCD3-205ENST00000469154 LRRC4BQ9NT99 713 aa16.6■□□□□ 0.25
SMARCD3-205ENST00000469154 TBC1D2BQ9UPU7 963 aa16.6■□□□□ 0.25
SMARCD3-205ENST00000469154 MYH14Q7Z406 1995 aaKnown RBP16.6■□□□□ 0.25
SMARCD3-205ENST00000469154 KINO60870 393 aaKnown RBP16.59■□□□□ 0.25
SMARCD3-205ENST00000469154 APBA3O96018 575 aa16.59■□□□□ 0.25
SMARCD3-205ENST00000469154 LRRFIP1Q32MZ4 808 aaKnown RBP16.59■□□□□ 0.25
SMARCD3-205ENST00000469154 MRFAP1L1Q96HT8 127 aa16.59■□□□□ 0.25
SMARCD3-205ENST00000469154 FAM160A1Q05DH4 1040 aa16.59■□□□□ 0.25
SMARCD3-205ENST00000469154 FBXL16Q8N461 479 aa16.59■□□□□ 0.25
SMARCD3-205ENST00000469154 CCDC191Q8NCU4 936 aa16.59■□□□□ 0.25
SMARCD3-205ENST00000469154 USP28Q96RU2 1077 aa16.59■□□□□ 0.25
SMARCD3-205ENST00000469154 NRBP1Q9UHY1 535 aa16.59■□□□□ 0.25
SMARCD3-205ENST00000469154 PDIA3P30101 505 aaKnown RBP16.58■□□□□ 0.25
SMARCD3-205ENST00000469154 FOSBP53539 338 aa16.58■□□□□ 0.25
SMARCD3-205ENST00000469154 TIMM10P62072 90 aa16.58■□□□□ 0.25
SMARCD3-205ENST00000469154 CCT2P78371 535 aaKnown RBP16.58■□□□□ 0.25
SMARCD3-205ENST00000469154 LRMPQ12912 555 aa16.58■□□□□ 0.25
SMARCD3-205ENST00000469154 DZIP3Q86Y13 1208 aaKnown RBP16.58■□□□□ 0.25
SMARCD3-205ENST00000469154 SMAP1Q8IYB5 467 aaPredicted RBP16.58■□□□□ 0.25
SMARCD3-205ENST00000469154 GOLPH3LQ9H4A5 285 aa16.58■□□□□ 0.25
SMARCD3-205ENST00000469154 ANO10Q9NW15 660 aa16.58■□□□□ 0.25
SMARCD3-205ENST00000469154 CARMIL3Q8ND23 1372 aa16.58■□□□□ 0.24
SMARCD3-205ENST00000469154 CICQ96RK0 1608 aaPredicted RBP16.58■□□□□ 0.24
SMARCD3-205ENST00000469154 CTIFO43310 598 aaKnown RBP16.58■□□□□ 0.24
SMARCD3-205ENST00000469154 NEMFO60524 1076 aa16.58■□□□□ 0.24
SMARCD3-205ENST00000469154 C11orf57Q6ZUT1 292 aaPredicted RBP16.58■□□□□ 0.24
SMARCD3-205ENST00000469154 SMIM5Q71RC9 77 aa16.58■□□□□ 0.24
SMARCD3-205ENST00000469154 ZNF831Q5JPB2 1677 aa16.58■□□□□ 0.24
SMARCD3-205ENST00000469154 LY75O60449 1722 aa16.57■□□□□ 0.24
SMARCD3-205ENST00000469154 MAP3K15Q6ZN16 1313 aa16.57■□□□□ 0.24
SMARCD3-205ENST00000469154 CNTNAP4Q9C0A0 1308 aa16.57■□□□□ 0.24
SMARCD3-205ENST00000469154 A0A1B0GUL7 405 aa16.57■□□□□ 0.24
SMARCD3-205ENST00000469154 SNW1Q13573 536 aaKnown RBP16.57■□□□□ 0.24
SMARCD3-205ENST00000469154 ENGASEQ8NFI3 743 aa16.57■□□□□ 0.24
SMARCD3-205ENST00000469154 CTNNA3Q9UI47 895 aa16.57■□□□□ 0.24
SMARCD3-205ENST00000469154 NAP1L2Q9ULW6 460 aaPredicted RBP16.57■□□□□ 0.24
SMARCD3-205ENST00000469154 COL5A3P25940 1745 aaPredicted RBP16.57■□□□□ 0.24
SMARCD3-205ENST00000469154 SMTNL1A8MU46 457 aa16.57■□□□□ 0.24
SMARCD3-205ENST00000469154 EVCP57679 992 aa16.57■□□□□ 0.24
SMARCD3-205ENST00000469154 SLFNL1Q499Z3 407 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms