RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 CHD4Q14839 1912 aa18.02■□□□□ 0.47
CRAMP1-206ENST00000468839 MAST3O60307 1309 aa18.01■□□□□ 0.47
CRAMP1-206ENST00000468839 IGSF3O75054 1194 aa18.01■□□□□ 0.47
CRAMP1-206ENST00000468839 KLRK1P26718 216 aa18.01■□□□□ 0.47
CRAMP1-206ENST00000468839 MAP3K12Q12852 859 aa18.01■□□□□ 0.47
CRAMP1-206ENST00000468839 SLFNL1Q499Z3 407 aa18.01■□□□□ 0.47
CRAMP1-206ENST00000468839 SLC9C2Q5TAH2 1124 aa18.01■□□□□ 0.47
CRAMP1-206ENST00000468839 CCDC129Q6ZRS4 1044 aa18.01■□□□□ 0.47
CRAMP1-206ENST00000468839 HSCBQ8IWL3 235 aa18.01■□□□□ 0.47
CRAMP1-206ENST00000468839 PDGFDQ9GZP0 370 aaPredicted RBP18.01■□□□□ 0.47
CRAMP1-206ENST00000468839 GGA1Q9UJY5 639 aa18.01■□□□□ 0.47
CRAMP1-206ENST00000468839 U3KPZ7 1027 aaPredicted RBP18.01■□□□□ 0.47
CRAMP1-206ENST00000468839 MAST2Q6P0Q8 1798 aa18.01■□□□□ 0.47
CRAMP1-206ENST00000468839 COL1A1P02452 1464 aaPredicted RBP18.01■□□□□ 0.47
CRAMP1-206ENST00000468839 TCRBV5S4A2TA0A5A2 114 aa18■□□□□ 0.47
CRAMP1-206ENST00000468839 H0YIN7 160 aa18■□□□□ 0.47
CRAMP1-206ENST00000468839 M0R2C6 588 aa18■□□□□ 0.47
CRAMP1-206ENST00000468839 IDH1O75874 414 aaKnown RBP18■□□□□ 0.47
CRAMP1-206ENST00000468839 PDE6AP16499 860 aa18■□□□□ 0.47
CRAMP1-206ENST00000468839 SLC4A3P48751 1232 aa18■□□□□ 0.47
CRAMP1-206ENST00000468839 WASHC4Q2M389 1173 aa18■□□□□ 0.47
CRAMP1-206ENST00000468839 TSGA10IPQ3SY00 556 aa18■□□□□ 0.47
CRAMP1-206ENST00000468839 CREB3L3Q68CJ9 461 aa18■□□□□ 0.47
CRAMP1-206ENST00000468839 TXNRD3Q86VQ6 643 aa18■□□□□ 0.47
CRAMP1-206ENST00000468839 C2CD5Q86YS7 1000 aa18■□□□□ 0.47
CRAMP1-206ENST00000468839 TM6SF1Q9BZW5 370 aa18■□□□□ 0.47
CRAMP1-206ENST00000468839 NSFL1CQ9UNZ2 370 aaKnown RBP18■□□□□ 0.47
CRAMP1-206ENST00000468839 SLC27A2O14975 620 aa17.99■□□□□ 0.47
CRAMP1-206ENST00000468839 RNF20Q5VTR2 975 aa17.99■□□□□ 0.47
CRAMP1-206ENST00000468839 PRPF40BQ6NWY9 871 aaKnown RBP17.99■□□□□ 0.47
CRAMP1-206ENST00000468839 RASEFQ8IZ41 740 aa17.99■□□□□ 0.47
CRAMP1-206ENST00000468839 TDRD7Q8NHU6 1098 aaKnown RBP17.99■□□□□ 0.47
CRAMP1-206ENST00000468839 WWC3Q9ULE0 1092 aa17.99■□□□□ 0.47
CRAMP1-206ENST00000468839 ZNF532Q9HCE3 1301 aa17.98■□□□□ 0.47
CRAMP1-206ENST00000468839 C10orf71Q711Q0 1435 aa17.98■□□□□ 0.47
CRAMP1-206ENST00000468839 ST18O60284 1047 aa17.98■□□□□ 0.47
CRAMP1-206ENST00000468839 UFL1O94874 794 aa17.98■□□□□ 0.47
CRAMP1-206ENST00000468839 HSPD1P10809 573 aaKnown RBP17.98■□□□□ 0.47
CRAMP1-206ENST00000468839 ZNF804AQ7Z570 1209 aa17.98■□□□□ 0.47
CRAMP1-206ENST00000468839 SLC51AQ86UW1 340 aa17.98■□□□□ 0.47
CRAMP1-206ENST00000468839 TBC1D16Q8TBP0 767 aa17.98■□□□□ 0.47
CRAMP1-206ENST00000468839 PUS7LQ9H0K6 701 aaKnown RBP17.98■□□□□ 0.47
CRAMP1-206ENST00000468839 IQSEC3Q9UPP2 1182 aaPredicted RBP17.98■□□□□ 0.47
CRAMP1-206ENST00000468839 DUOX1Q9NRD9 1551 aa17.97■□□□□ 0.47
CRAMP1-206ENST00000468839 CD2BP2O95400 341 aaKnown RBP17.97■□□□□ 0.47
CRAMP1-206ENST00000468839 ZKSCAN1P17029 563 aaPredicted RBP17.97■□□□□ 0.47
CRAMP1-206ENST00000468839 TMED8Q6PL24 325 aaPredicted RBP17.97■□□□□ 0.47
CRAMP1-206ENST00000468839 CNKSR1Q969H4 720 aa17.97■□□□□ 0.47
CRAMP1-206ENST00000468839 ZNF622Q969S3 477 aaKnown RBP eCLIP17.97■□□□□ 0.47
CRAMP1-206ENST00000468839 LRP2BPQ9P2M1 347 aa17.97■□□□□ 0.47
CRAMP1-206ENST00000468839 POLLQ9UGP5 575 aa17.97■□□□□ 0.47
CRAMP1-206ENST00000468839 MYH2Q9UKX2 1941 aa17.96■□□□□ 0.47
CRAMP1-206ENST00000468839 K7ELQ4 463 aaPredicted RBP17.96■□□□□ 0.47
CRAMP1-206ENST00000468839 GPAA1O43292 621 aa17.96■□□□□ 0.47
CRAMP1-206ENST00000468839 MCM2P49736 904 aa17.96■□□□□ 0.47
CRAMP1-206ENST00000468839 NEK4P51957 841 aa17.96■□□□□ 0.47
CRAMP1-206ENST00000468839 MAGEB6Q8N7X4 407 aa17.96■□□□□ 0.47
CRAMP1-206ENST00000468839 UPF1Q92900 1129 aaKnown RBP eCLIP17.96■□□□□ 0.47
CRAMP1-206ENST00000468839 SALL1Q9NSC2 1324 aa17.96■□□□□ 0.46
CRAMP1-206ENST00000468839 FRAT2O75474 233 aaPredicted RBP17.95■□□□□ 0.46
CRAMP1-206ENST00000468839 IL1R1P14778 569 aa17.95■□□□□ 0.46
CRAMP1-206ENST00000468839 VPS53Q5VIR6 699 aa17.95■□□□□ 0.46
CRAMP1-206ENST00000468839 MPNDQ8N594 471 aa17.95■□□□□ 0.46
CRAMP1-206ENST00000468839 TMX4Q9H1E5 349 aaPredicted RBP17.95■□□□□ 0.46
CRAMP1-206ENST00000468839 PSMA5P28066 241 aa17.94■□□□□ 0.46
CRAMP1-206ENST00000468839 KRT32Q14532 448 aa17.94■□□□□ 0.46
CRAMP1-206ENST00000468839 SPTY2D1Q68D10 685 aaPredicted RBP17.94■□□□□ 0.46
CRAMP1-206ENST00000468839 ZGPATQ8N5A5 531 aaKnown RBP17.94■□□□□ 0.46
CRAMP1-206ENST00000468839 WDR66Q8TBY9 1149 aa17.94■□□□□ 0.46
CRAMP1-206ENST00000468839 STRBPQ96SI9 672 aaKnown RBP17.94■□□□□ 0.46
CRAMP1-206ENST00000468839 ZSWIM6Q9HCJ5 1215 aa17.94■□□□□ 0.46
CRAMP1-206ENST00000468839 CD209Q9NNX6 404 aa17.94■□□□□ 0.46
CRAMP1-206ENST00000468839 ABCF2Q9UG63 623 aa17.94■□□□□ 0.46
CRAMP1-206ENST00000468839 CTNNA3Q9UI47 895 aa17.94■□□□□ 0.46
CRAMP1-206ENST00000468839 RPAP1Q9BWH6 1393 aaPredicted RBP17.93■□□□□ 0.46
CRAMP1-206ENST00000468839 C6orf229H3BNL8 230 aa17.93■□□□□ 0.46
CRAMP1-206ENST00000468839 FOXP2O15409 715 aa17.93■□□□□ 0.46
CRAMP1-206ENST00000468839 ALX1Q15699 326 aa17.93■□□□□ 0.46
CRAMP1-206ENST00000468839 CC2D2BQ6DHV5 1058 aa17.93■□□□□ 0.46
CRAMP1-206ENST00000468839 ERICH6Q7L0X2 663 aa17.93■□□□□ 0.46
CRAMP1-206ENST00000468839 TTC14Q96N46 770 aa17.93■□□□□ 0.46
CRAMP1-206ENST00000468839 BRCA1P38398 1863 aaKnown RBP17.92■□□□□ 0.46
CRAMP1-206ENST00000468839 CYP21A2P08686 494 aa17.92■□□□□ 0.46
CRAMP1-206ENST00000468839 CHRNA5P30532 468 aa17.92■□□□□ 0.46
CRAMP1-206ENST00000468839 ADCK5Q3MIX3 580 aa17.92■□□□□ 0.46
CRAMP1-206ENST00000468839 C7orf43Q8WVR3 580 aa17.92■□□□□ 0.46
CRAMP1-206ENST00000468839 GPR101Q96P66 508 aaPredicted RBP17.92■□□□□ 0.46
CRAMP1-206ENST00000468839 MTFR1LQ9H019 292 aa17.92■□□□□ 0.46
CRAMP1-206ENST00000468839 RAI14Q9P0K7 980 aa17.92■□□□□ 0.46
CRAMP1-206ENST00000468839 GNAT2P19087 354 aa17.91■□□□□ 0.46
CRAMP1-206ENST00000468839 CYP7A1P22680 504 aa17.91■□□□□ 0.46
CRAMP1-206ENST00000468839 CHAF1AQ13111 956 aaPredicted RBP17.91■□□□□ 0.46
CRAMP1-206ENST00000468839 DPP8Q6V1X1 898 aaPredicted RBP17.91■□□□□ 0.46
CRAMP1-206ENST00000468839 RUFY3Q7L099 469 aa17.91■□□□□ 0.46
CRAMP1-206ENST00000468839 AIDAQ96BJ3 306 aa17.91■□□□□ 0.46
CRAMP1-206ENST00000468839 JAKMIP1Q96N16 626 aaKnown RBP17.91■□□□□ 0.46
CRAMP1-206ENST00000468839 UPF3BQ9BZI7 483 aaKnown RBP17.91■□□□□ 0.46
CRAMP1-206ENST00000468839 COA1Q9GZY4 146 aa17.91■□□□□ 0.46
CRAMP1-206ENST00000468839 ALDH8A1Q9H2A2 487 aaPredicted RBP17.91■□□□□ 0.46
CRAMP1-206ENST00000468839 CYP46A1Q9Y6A2 500 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms