RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 STXBP5LQ9Y2K9 1186 aa14.5□□□□□ -0.09
NEDD9-207ENST00000468612 OTOFQ9HC10 1997 aa14.5□□□□□ -0.09
NEDD9-207ENST00000468612 PCCAP05165 728 aaPredicted RBP14.49□□□□□ -0.09
NEDD9-207ENST00000468612 CCT4P50991 539 aaKnown RBP14.49□□□□□ -0.09
NEDD9-207ENST00000468612 ELP3Q9H9T3 547 aa14.49□□□□□ -0.09
NEDD9-207ENST00000468612 PCDHAC2Q9Y5I4 1007 aa14.49□□□□□ -0.09
NEDD9-207ENST00000468612 ECM29Q5VYK3 1845 aa14.48□□□□□ -0.09
NEDD9-207ENST00000468612 CCL15-CCL14A0A0B4J2E2 113 aa14.48□□□□□ -0.09
NEDD9-207ENST00000468612 TLR2O60603 784 aa14.48□□□□□ -0.09
NEDD9-207ENST00000468612 GJB1P08034 283 aa14.48□□□□□ -0.09
NEDD9-207ENST00000468612 KIF22Q14807 665 aa14.48□□□□□ -0.09
NEDD9-207ENST00000468612 CCL15Q16663 113 aa14.48□□□□□ -0.09
NEDD9-207ENST00000468612 HDGFL1Q5TGJ6 251 aa14.48□□□□□ -0.09
NEDD9-207ENST00000468612 CNKSR2Q8WXI2 1034 aa14.48□□□□□ -0.09
NEDD9-207ENST00000468612 BSDC1Q9NW68 430 aaPredicted RBP14.48□□□□□ -0.09
NEDD9-207ENST00000468612 MAPK8IP3Q9UPT6 1336 aa14.47□□□□□ -0.09
NEDD9-207ENST00000468612 CLRN2A0PK11 232 aa14.47□□□□□ -0.09
NEDD9-207ENST00000468612 GTF2A2P52657 109 aa14.47□□□□□ -0.09
NEDD9-207ENST00000468612 GTF2IP78347 998 aa14.47□□□□□ -0.09
NEDD9-207ENST00000468612 DEFB123Q8N688 67 aa14.47□□□□□ -0.09
NEDD9-207ENST00000468612 CDC5LQ99459 802 aaKnown RBP14.47□□□□□ -0.09
NEDD9-207ENST00000468612 DBF4Q9UBU7 674 aaPredicted RBP14.47□□□□□ -0.09
NEDD9-207ENST00000468612 STAP2Q9UGK3 403 aa14.47□□□□□ -0.09
NEDD9-207ENST00000468612 AOX1Q06278 1338 aa14.46□□□□□ -0.09
NEDD9-207ENST00000468612 SPDYE2BA6NHP3 402 aa14.46□□□□□ -0.09
NEDD9-207ENST00000468612 HOXB7P09629 217 aa14.46□□□□□ -0.09
NEDD9-207ENST00000468612 SPDYE6P0CI01 402 aa14.46□□□□□ -0.09
NEDD9-207ENST00000468612 CCL5P13501 91 aa14.46□□□□□ -0.09
NEDD9-207ENST00000468612 RASA3Q14644 834 aa14.46□□□□□ -0.09
NEDD9-207ENST00000468612 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.46□□□□□ -0.09
NEDD9-207ENST00000468612 CERS5Q8N5B7 392 aa14.46□□□□□ -0.09
NEDD9-207ENST00000468612 HYPKQ9NX55 129 aa14.46□□□□□ -0.09
NEDD9-207ENST00000468612 LEMD3Q9Y2U8 911 aa14.46□□□□□ -0.09
NEDD9-207ENST00000468612 CHL1O00533 1208 aa14.45□□□□□ -0.1
NEDD9-207ENST00000468612 FARP2O94887 1054 aaPredicted RBP14.45□□□□□ -0.1
NEDD9-207ENST00000468612 KLRK1P26718 216 aa14.45□□□□□ -0.1
NEDD9-207ENST00000468612 CTGFP29279 349 aa14.45□□□□□ -0.1
NEDD9-207ENST00000468612 GRK4P32298 578 aa14.45□□□□□ -0.1
NEDD9-207ENST00000468612 RIPK4P57078 832 aa14.45□□□□□ -0.1
NEDD9-207ENST00000468612 Q7L0L9 218 aa14.45□□□□□ -0.1
NEDD9-207ENST00000468612 CCDC191Q8NCU4 936 aa14.45□□□□□ -0.1
NEDD9-207ENST00000468612 JARID2Q92833 1246 aaPredicted RBP14.45□□□□□ -0.1
NEDD9-207ENST00000468612 PRMT6Q96LA8 375 aaPredicted RBP14.45□□□□□ -0.1
NEDD9-207ENST00000468612 PNNQ9H307 717 aaKnown RBP14.45□□□□□ -0.1
NEDD9-207ENST00000468612 VEZTQ9HBM0 779 aa14.45□□□□□ -0.1
NEDD9-207ENST00000468612 ZCCHC17Q9NP64 241 aaKnown RBP14.45□□□□□ -0.1
NEDD9-207ENST00000468612 MTMR10Q9NXD2 777 aa14.45□□□□□ -0.1
NEDD9-207ENST00000468612 SRRDQ9UH36 339 aa14.45□□□□□ -0.1
NEDD9-207ENST00000468612 MYO1BO43795 1136 aa14.44□□□□□ -0.1
NEDD9-207ENST00000468612 EVI5O60447 810 aa14.44□□□□□ -0.1
NEDD9-207ENST00000468612 CTSWP56202 376 aa14.44□□□□□ -0.1
NEDD9-207ENST00000468612 VGLL4Q14135 290 aa14.44□□□□□ -0.1
NEDD9-207ENST00000468612 CFAP100Q494V2 611 aa14.44□□□□□ -0.1
NEDD9-207ENST00000468612 RIC3Q7Z5B4 369 aa14.44□□□□□ -0.1
NEDD9-207ENST00000468612 RNF208Q9H0X6 261 aa14.44□□□□□ -0.1
NEDD9-207ENST00000468612 RIPOR2Q9Y4F9 1068 aa14.44□□□□□ -0.1
NEDD9-207ENST00000468612 WDHD1O75717 1129 aaPredicted RBP14.43□□□□□ -0.1
NEDD9-207ENST00000468612 BMP8BP34820 402 aa14.43□□□□□ -0.1
NEDD9-207ENST00000468612 U2AF1L4Q8WU68 220 aaKnown RBP14.43□□□□□ -0.1
NEDD9-207ENST00000468612 TRIM47Q96LD4 638 aa14.43□□□□□ -0.1
NEDD9-207ENST00000468612 MYD88Q99836 296 aa14.43□□□□□ -0.1
NEDD9-207ENST00000468612 GDF15Q99988 308 aa14.43□□□□□ -0.1
NEDD9-207ENST00000468612 CWC25Q9NXE8 425 aaPredicted RBP14.43□□□□□ -0.1
NEDD9-207ENST00000468612 SPEF2Q9C093 1822 aa14.43□□□□□ -0.1
NEDD9-207ENST00000468612 EYSQ5T1H1 3165 aa14.42□□□□□ -0.1
NEDD9-207ENST00000468612 BTBD19C9JJ37 291 aa14.42□□□□□ -0.1
NEDD9-207ENST00000468612 OSBPP22059 807 aa14.42□□□□□ -0.1
NEDD9-207ENST00000468612 C17orf99Q6UX52 265 aa14.42□□□□□ -0.1
NEDD9-207ENST00000468612 TTLL11Q8NHH1 800 aa14.42□□□□□ -0.1
NEDD9-207ENST00000468612 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.42□□□□□ -0.1
NEDD9-207ENST00000468612 RAET1EQ8TD07 263 aa14.42□□□□□ -0.1
NEDD9-207ENST00000468612 TEPSINQ96N21 525 aa14.42□□□□□ -0.1
NEDD9-207ENST00000468612 GREM2Q9H772 168 aa14.42□□□□□ -0.1
NEDD9-207ENST00000468612 CD209Q9NNX6 404 aa14.42□□□□□ -0.1
NEDD9-207ENST00000468612 LAMA2P24043 3122 aaKnown RBP14.41□□□□□ -0.1
NEDD9-207ENST00000468612 CETPP11597 493 aa14.41□□□□□ -0.1
NEDD9-207ENST00000468612 HOXD10P28358 340 aa14.41□□□□□ -0.1
NEDD9-207ENST00000468612 PSMC4P43686 418 aa14.41□□□□□ -0.1
NEDD9-207ENST00000468612 MAP3K9P80192 1104 aa14.41□□□□□ -0.1
NEDD9-207ENST00000468612 GOLGA2Q08379 1002 aa14.41□□□□□ -0.1
NEDD9-207ENST00000468612 LMOD3Q0VAK6 560 aa14.41□□□□□ -0.1
NEDD9-207ENST00000468612 LRIT3Q3SXY7 679 aa14.41□□□□□ -0.1
NEDD9-207ENST00000468612 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.41□□□□□ -0.1
NEDD9-207ENST00000468612 CDAN1Q8IWY9 1227 aa14.41□□□□□ -0.1
NEDD9-207ENST00000468612 HELBQ8NG08 1087 aaPredicted RBP14.41□□□□□ -0.1
NEDD9-207ENST00000468612 SPDYE5A6NIY4 337 aa14.4□□□□□ -0.1
NEDD9-207ENST00000468612 F8W031 263 aaPredicted RBP14.4□□□□□ -0.1
NEDD9-207ENST00000468612 SGPL1O95470 568 aa14.4□□□□□ -0.1
NEDD9-207ENST00000468612 TMPOP42166 694 aaKnown RBP14.4□□□□□ -0.1
NEDD9-207ENST00000468612 UBXN2AP68543 259 aa14.4□□□□□ -0.1
NEDD9-207ENST00000468612 CSADQ9Y600 493 aa14.4□□□□□ -0.1
NEDD9-207ENST00000468612 MYPNQ86TC9 1320 aa14.4□□□□□ -0.1
NEDD9-207ENST00000468612 IRS2Q9Y4H2 1338 aa14.4□□□□□ -0.1
NEDD9-207ENST00000468612 ECM2O94769 699 aaPredicted RBP14.39□□□□□ -0.11
NEDD9-207ENST00000468612 FKBP1AP62942 108 aaKnown RBP14.39□□□□□ -0.11
NEDD9-207ENST00000468612 TNFAIP1Q13829 316 aa14.39□□□□□ -0.11
NEDD9-207ENST00000468612 SPDYE2Q495Y8 402 aa14.39□□□□□ -0.11
NEDD9-207ENST00000468612 UNC93B1Q9H1C4 597 aa14.39□□□□□ -0.11
NEDD9-207ENST00000468612 PHAXQ9H814 394 aaKnown RBP14.39□□□□□ -0.11
NEDD9-207ENST00000468612 PRDM6Q9NQX0 595 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms