RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 PCDHAC2Q9Y5I4 1007 aa16.71■□□□□ 0.27
PTPN7-207ENST00000468385 SSC5DA1L4H1 1573 aa16.71■□□□□ 0.27
PTPN7-207ENST00000468385 IL16Q14005 1332 aa16.7■□□□□ 0.26
PTPN7-207ENST00000468385 ANKRD18BA2A2Z9 1011 aa16.7■□□□□ 0.26
PTPN7-207ENST00000468385 DLGAP5Q15398 846 aa16.7■□□□□ 0.26
PTPN7-207ENST00000468385 FOXO4P98177 505 aa16.69■□□□□ 0.26
PTPN7-207ENST00000468385 HELBQ8NG08 1087 aaPredicted RBP16.69■□□□□ 0.26
PTPN7-207ENST00000468385 MANSC4A6NHS7 340 aaPredicted RBP16.68■□□□□ 0.26
PTPN7-207ENST00000468385 F8W031 263 aaPredicted RBP16.68■□□□□ 0.26
PTPN7-207ENST00000468385 ALDH1A1P00352 501 aa16.68■□□□□ 0.26
PTPN7-207ENST00000468385 IL1R1P14778 569 aa16.68■□□□□ 0.26
PTPN7-207ENST00000468385 IFNL1Q8IU54 200 aa16.68■□□□□ 0.26
PTPN7-207ENST00000468385 SLC10A4Q96EP9 437 aa16.68■□□□□ 0.26
PTPN7-207ENST00000468385 CLMNQ96JQ2 1002 aa16.68■□□□□ 0.26
PTPN7-207ENST00000468385 PPP2R3BQ9Y5P8 575 aa16.68■□□□□ 0.26
PTPN7-207ENST00000468385 A0A1B0GUL6 1792 aa16.68■□□□□ 0.26
PTPN7-207ENST00000468385 AOX1Q06278 1338 aa16.68■□□□□ 0.26
PTPN7-207ENST00000468385 FANCIQ9NVI1 1328 aa16.68■□□□□ 0.26
PTPN7-207ENST00000468385 CLRN2A0PK11 232 aa16.67■□□□□ 0.26
PTPN7-207ENST00000468385 SPDYE2BA6NHP3 402 aa16.67■□□□□ 0.26
PTPN7-207ENST00000468385 VAMP4O75379 141 aa16.67■□□□□ 0.26
PTPN7-207ENST00000468385 SPDYE6P0CI01 402 aa16.67■□□□□ 0.26
PTPN7-207ENST00000468385 ZBTB48P10074 688 aaPredicted RBP16.67■□□□□ 0.26
PTPN7-207ENST00000468385 INHBEP58166 350 aa16.67■□□□□ 0.26
PTPN7-207ENST00000468385 FKBP1AP62942 108 aaKnown RBP16.67■□□□□ 0.26
PTPN7-207ENST00000468385 IFIT5Q13325 482 aaKnown RBP16.67■□□□□ 0.26
PTPN7-207ENST00000468385 CFAP100Q494V2 611 aa16.67■□□□□ 0.26
PTPN7-207ENST00000468385 WNK4Q96J92 1243 aa16.67■□□□□ 0.26
PTPN7-207ENST00000468385 PRMT6Q96LA8 375 aaPredicted RBP16.67■□□□□ 0.26
PTPN7-207ENST00000468385 ECM29Q5VYK3 1845 aa16.66■□□□□ 0.26
PTPN7-207ENST00000468385 IGF2BP3O00425 579 aaKnown RBP eCLIP16.66■□□□□ 0.26
PTPN7-207ENST00000468385 PPP1R12BO60237 982 aaPredicted RBP16.66■□□□□ 0.26
PTPN7-207ENST00000468385 BEND3Q5T5X7 828 aa16.66■□□□□ 0.26
PTPN7-207ENST00000468385 ZNF804AQ7Z570 1209 aa16.66■□□□□ 0.26
PTPN7-207ENST00000468385 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.66■□□□□ 0.26
PTPN7-207ENST00000468385 LAMB1P07942 1786 aa16.65■□□□□ 0.26
PTPN7-207ENST00000468385 UNCXA6NJT0 531 aa16.65■□□□□ 0.26
PTPN7-207ENST00000468385 F6X3S4 739 aa16.65■□□□□ 0.26
PTPN7-207ENST00000468385 EPHA10Q5JZY3 1008 aa16.65■□□□□ 0.26
PTPN7-207ENST00000468385 NBPF12Q5TAG4 269 aaPredicted RBP16.65■□□□□ 0.26
PTPN7-207ENST00000468385 CNKSR2Q8WXI2 1034 aa16.65■□□□□ 0.26
PTPN7-207ENST00000468385 VEZTQ9HBM0 779 aa16.65■□□□□ 0.26
PTPN7-207ENST00000468385 JAG2Q9Y219 1238 aa16.65■□□□□ 0.26
PTPN7-207ENST00000468385 CHMP3Q9Y3E7 222 aa16.65■□□□□ 0.26
PTPN7-207ENST00000468385 HTTP42858 3142 aa16.64■□□□□ 0.25
PTPN7-207ENST00000468385 MYO1BO43795 1136 aa16.64■□□□□ 0.25
PTPN7-207ENST00000468385 GJA5P36382 358 aa16.64■□□□□ 0.25
PTPN7-207ENST00000468385 SUPT20HL1Q3ZLR7 823 aa16.64■□□□□ 0.25
PTPN7-207ENST00000468385 LMBR1LQ6UX01 489 aa16.64■□□□□ 0.25
PTPN7-207ENST00000468385 OTOP1Q7RTM1 612 aa16.64■□□□□ 0.25
PTPN7-207ENST00000468385 ZNF594Q96JF6 807 aaPredicted RBP16.64■□□□□ 0.25
PTPN7-207ENST00000468385 TRIM17Q9Y577 477 aa16.64■□□□□ 0.25
PTPN7-207ENST00000468385 CACNA1FO60840 1977 aa16.64■□□□□ 0.25
PTPN7-207ENST00000468385 USP2O75604 605 aaPredicted RBP16.63■□□□□ 0.25
PTPN7-207ENST00000468385 EXOSC9Q06265 439 aaKnown RBP16.63■□□□□ 0.25
PTPN7-207ENST00000468385 RASA3Q14644 834 aa16.63■□□□□ 0.25
PTPN7-207ENST00000468385 IREB2P48200 963 aaKnown RBP16.62■□□□□ 0.25
PTPN7-207ENST00000468385 LDHAL6AQ6ZMR3 332 aa16.62■□□□□ 0.25
PTPN7-207ENST00000468385 WDR63Q8IWG1 891 aa16.62■□□□□ 0.25
PTPN7-207ENST00000468385 FAM205AQ6ZU69 1335 aa16.62■□□□□ 0.25
PTPN7-207ENST00000468385 PLIN1O60240 522 aa16.61■□□□□ 0.25
PTPN7-207ENST00000468385 RBM5P52756 815 aaKnown RBP eCLIP16.61■□□□□ 0.25
PTPN7-207ENST00000468385 CCDC57Q2TAC2 916 aa16.61■□□□□ 0.25
PTPN7-207ENST00000468385 ANKRD13AQ8IZ07 590 aa16.61■□□□□ 0.25
PTPN7-207ENST00000468385 PTPN18Q99952 460 aa16.61■□□□□ 0.25
PTPN7-207ENST00000468385 CNNM1Q9NRU3 951 aa16.61■□□□□ 0.25
PTPN7-207ENST00000468385 MKI67P46013 3256 aaKnown RBP16.6■□□□□ 0.25
PTPN7-207ENST00000468385 TESPA1A2RU30 521 aaPredicted RBP16.6■□□□□ 0.25
PTPN7-207ENST00000468385 POTEFA5A3E0 1075 aa16.6■□□□□ 0.25
PTPN7-207ENST00000468385 GRM8O00222 908 aa16.6■□□□□ 0.25
PTPN7-207ENST00000468385 CRHR2Q13324 411 aa16.6■□□□□ 0.25
PTPN7-207ENST00000468385 SPDYE2Q495Y8 402 aa16.6■□□□□ 0.25
PTPN7-207ENST00000468385 TAF7LQ5H9L4 462 aa16.6■□□□□ 0.25
PTPN7-207ENST00000468385 TDRD7Q8NHU6 1098 aaKnown RBP16.6■□□□□ 0.25
PTPN7-207ENST00000468385 CD99L2Q8TCZ2 262 aa16.6■□□□□ 0.25
PTPN7-207ENST00000468385 PTPN22Q9Y2R2 807 aa16.6■□□□□ 0.25
PTPN7-207ENST00000468385 SALL2Q9Y467 1007 aaPredicted RBP16.6■□□□□ 0.25
PTPN7-207ENST00000468385 CENPFP49454 3210 aa16.6■□□□□ 0.25
PTPN7-207ENST00000468385 BRCA2P51587 3418 aa16.59■□□□□ 0.25
PTPN7-207ENST00000468385 CAP1Q01518 475 aa16.59■□□□□ 0.25
PTPN7-207ENST00000468385 MFSD14BQ5SR56 506 aa16.59■□□□□ 0.25
PTPN7-207ENST00000468385 INTS3Q68E01 1043 aaKnown RBP16.59■□□□□ 0.25
PTPN7-207ENST00000468385 ERO1AQ96HE7 468 aa16.59■□□□□ 0.25
PTPN7-207ENST00000468385 SPINK5Q9NQ38 1064 aaPredicted RBP16.59■□□□□ 0.25
PTPN7-207ENST00000468385 ZNF70Q9UC06 446 aaPredicted RBP16.59■□□□□ 0.25
PTPN7-207ENST00000468385 SERPINA10Q9UK55 444 aa16.59■□□□□ 0.25
PTPN7-207ENST00000468385 OTOFQ9HC10 1997 aa16.58■□□□□ 0.25
PTPN7-207ENST00000468385 GYG1P46976 350 aa16.58■□□□□ 0.24
PTPN7-207ENST00000468385 TNFAIP1Q13829 316 aa16.58■□□□□ 0.24
PTPN7-207ENST00000468385 UBE4AQ14139 1066 aa16.58■□□□□ 0.24
PTPN7-207ENST00000468385 OTUD7BQ6GQQ9 843 aa16.58■□□□□ 0.24
PTPN7-207ENST00000468385 CDAN1Q8IWY9 1227 aa16.58■□□□□ 0.24
PTPN7-207ENST00000468385 OPTNQ96CV9 577 aa16.58■□□□□ 0.24
PTPN7-207ENST00000468385 FAM84BQ96KN1 310 aaPredicted RBP16.58■□□□□ 0.24
PTPN7-207ENST00000468385 TEPSINQ96N21 525 aa16.58■□□□□ 0.24
PTPN7-207ENST00000468385 TDRD3Q9H7E2 651 aaKnown RBP16.58■□□□□ 0.24
PTPN7-207ENST00000468385 ELP3Q9H9T3 547 aa16.58■□□□□ 0.24
PTPN7-207ENST00000468385 TTF2Q9UNY4 1162 aaKnown RBP16.58■□□□□ 0.24
PTPN7-207ENST00000468385 HIBADHP31937 336 aaKnown RBP16.57■□□□□ 0.24
PTPN7-207ENST00000468385 KAZALD1Q96I82 304 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms