RNA–Protein interactions for RNA: ENST00000468149.5

MSL3-210, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-210ENST00000468149 CCDC181Q5TID7 509 aa8.9□□□□□ -0.99
MSL3-210ENST00000468149 DNAAF4Q8WXU2 420 aa8.9□□□□□ -0.99
MSL3-210ENST00000468149 ZNF622Q969S3 477 aaKnown RBP eCLIP8.9□□□□□ -0.992e-6■■■□□ 18.8
MSL3-210ENST00000468149 CWC25Q9NXE8 425 aaPredicted RBP8.9□□□□□ -0.99
MSL3-210ENST00000468149 PTPRCP08575 1304 aa8.89□□□□□ -0.99
MSL3-210ENST00000468149 TTLL13PA6NNM8 815 aa8.89□□□□□ -0.99
MSL3-210ENST00000468149 PCCAP05165 728 aaPredicted RBP8.89□□□□□ -0.99
MSL3-210ENST00000468149 IGKV5-2P06315 115 aa8.89□□□□□ -0.99
MSL3-210ENST00000468149 USP17L8P0C7I0 530 aa8.89□□□□□ -0.99
MSL3-210ENST00000468149 FOXK1P85037 733 aa8.89□□□□□ -0.99
MSL3-210ENST00000468149 SOGA3Q5TF21 947 aa8.89□□□□□ -0.99
MSL3-210ENST00000468149 LARGE2Q8N3Y3 721 aa8.89□□□□□ -0.99
MSL3-210ENST00000468149 LINS1Q8NG48 757 aa8.89□□□□□ -0.99
MSL3-210ENST00000468149 SSH1Q8WYL5 1049 aa8.89□□□□□ -0.99
MSL3-210ENST00000468149 FAM89AQ96GI7 184 aa8.89□□□□□ -0.99
MSL3-210ENST00000468149 DNAJC2Q99543 621 aaKnown RBP8.89□□□□□ -0.99
MSL3-210ENST00000468149 NEURL1BA8MQ27 555 aa8.88□□□□□ -0.99
MSL3-210ENST00000468149 PRPF40BQ6NWY9 871 aaKnown RBP8.88□□□□□ -0.99
MSL3-210ENST00000468149 FBXO33Q7Z6M2 555 aa8.88□□□□□ -0.99
MSL3-210ENST00000468149 MRPL50Q8N5N7 158 aaKnown RBP8.88□□□□□ -0.99
MSL3-210ENST00000468149 RPGRQ92834 1020 aaKnown RBP8.88□□□□□ -0.99
MSL3-210ENST00000468149 GPATCH3Q96I76 525 aa8.88□□□□□ -0.99
MSL3-210ENST00000468149 L3MBTL3Q96JM7 780 aaPredicted RBP8.88□□□□□ -0.99
MSL3-210ENST00000468149 CRAMP1Q96RY5 1269 aa8.88□□□□□ -0.99
MSL3-210ENST00000468149 BMP2KQ9NSY1 1161 aaPredicted RBP8.88□□□□□ -0.99
MSL3-210ENST00000468149 BIN2Q9UBW5 565 aaPredicted RBP8.88□□□□□ -0.99
MSL3-210ENST00000468149 ZMIZ1Q9ULJ6 1067 aa8.88□□□□□ -0.99
MSL3-210ENST00000468149 CDHR2Q9BYE9 1310 aa8.88□□□□□ -0.99
MSL3-210ENST00000468149 SF3B3Q15393 1217 aaKnown RBP8.87□□□□□ -0.99
MSL3-210ENST00000468149 CWF19L2Q2TBE0 894 aaKnown RBP8.87□□□□□ -0.99
MSL3-210ENST00000468149 TEX2Q8IWB9 1127 aa8.87□□□□□ -0.99
MSL3-210ENST00000468149 SYNE4Q8N205 404 aa8.87□□□□□ -0.99
MSL3-210ENST00000468149 STK32AQ8WU08 396 aa8.87□□□□□ -0.99
MSL3-210ENST00000468149 RBM17Q96I25 401 aaKnown RBP8.87□□□□□ -0.99
MSL3-210ENST00000468149 TANGO6Q9C0B7 1094 aa8.87□□□□□ -0.99
MSL3-210ENST00000468149 A0A1B0GUL6 1792 aa8.87□□□□□ -0.99
MSL3-210ENST00000468149 LTBP1Q14766 1721 aa8.87□□□□□ -0.99
MSL3-210ENST00000468149 F6X3S4 739 aa8.87□□□□□ -0.99
MSL3-210ENST00000468149 IRS4O14654 1257 aaPredicted RBP8.87□□□□□ -0.99
MSL3-210ENST00000468149 HCLS1P14317 486 aaPredicted RBP8.87□□□□□ -0.99
MSL3-210ENST00000468149 YY1P25490 414 aa8.87□□□□□ -0.99
MSL3-210ENST00000468149 TAGLNQ01995 201 aaKnown RBP8.87□□□□□ -0.99
MSL3-210ENST00000468149 GCKRQ14397 625 aa8.87□□□□□ -0.99
MSL3-210ENST00000468149 GRIPAP1Q4V328 841 aa8.87□□□□□ -0.99
MSL3-210ENST00000468149 BEND3Q5T5X7 828 aa8.87□□□□□ -0.99
MSL3-210ENST00000468149 EGFLAMQ63HQ2 1017 aa8.87□□□□□ -0.99
MSL3-210ENST00000468149 ARHGAP27Q6ZUM4 889 aa8.87□□□□□ -0.99
MSL3-210ENST00000468149 C7orf43Q8WVR3 580 aa8.87□□□□□ -0.99
MSL3-210ENST00000468149 SMC4Q9NTJ3 1288 aa8.87□□□□□ -0.99
MSL3-210ENST00000468149 LTBP3Q9NS15 1303 aa8.86□□□□□ -0.99
MSL3-210ENST00000468149 SNED1Q8TER0 1413 aa8.86□□□□□ -0.99
MSL3-210ENST00000468149 H7C1W4 665 aa8.86□□□□□ -0.99
MSL3-210ENST00000468149 C21orf2O43822 256 aa8.86□□□□□ -0.99
MSL3-210ENST00000468149 PDE8AO60658 829 aa8.86□□□□□ -0.99
MSL3-210ENST00000468149 ALDH1L1O75891 902 aa8.86□□□□□ -0.99
MSL3-210ENST00000468149 SERPINB4P48594 390 aa8.86□□□□□ -0.99
MSL3-210ENST00000468149 RARSP54136 660 aaKnown RBP8.86□□□□□ -0.99
MSL3-210ENST00000468149 IGBP1P78318 339 aa8.86□□□□□ -0.99
MSL3-210ENST00000468149 RTL5Q5HYW3 569 aaPredicted RBP8.86□□□□□ -0.99
MSL3-210ENST00000468149 C3orf67Q6ZVT6 689 aa8.86□□□□□ -0.99
MSL3-210ENST00000468149 PIK3R5Q8WYR1 880 aa8.86□□□□□ -0.99
MSL3-210ENST00000468149 ABCC4O15439 1325 aa8.86□□□□□ -0.99
MSL3-210ENST00000468149 KIF16BQ96L93 1317 aa8.86□□□□□ -0.99
MSL3-210ENST00000468149 GPR37L1O60883 481 aa8.85□□□□□ -0.99
MSL3-210ENST00000468149 BBOX1O75936 387 aa8.85□□□□□ -0.99
MSL3-210ENST00000468149 DDX46Q7L014 1031 aaKnown RBP8.85□□□□□ -0.99
MSL3-210ENST00000468149 UBE3BQ7Z3V4 1068 aa8.85□□□□□ -0.99
MSL3-210ENST00000468149 TMC4Q7Z404 712 aa8.85□□□□□ -0.99
MSL3-210ENST00000468149 RTKN2Q8IZC4 609 aa8.85□□□□□ -0.99
MSL3-210ENST00000468149 PRR7Q8TB68 274 aa8.85□□□□□ -0.99
MSL3-210ENST00000468149 ARHGAP45Q92619 1136 aa8.85□□□□□ -0.99
MSL3-210ENST00000468149 PLA2G12BQ9BX93 195 aa8.85□□□□□ -0.99
MSL3-210ENST00000468149 KLHL42Q9P2K6 505 aa8.85□□□□□ -0.99
MSL3-210ENST00000468149 COL4A1P02462 1669 aa8.85□□□□□ -0.99
MSL3-210ENST00000468149 SPTLC1O15269 473 aa8.84□□□□□ -0.99
MSL3-210ENST00000468149 LMNB1P20700 586 aa8.84□□□□□ -0.99
MSL3-210ENST00000468149 GRAPQ13588 217 aa8.84□□□□□ -0.99
MSL3-210ENST00000468149 CCDC152Q4G0S7 254 aa8.84□□□□□ -0.99
MSL3-210ENST00000468149 CCDC93Q567U6 631 aa8.84□□□□□ -0.99
MSL3-210ENST00000468149 SDE2Q6IQ49 451 aa8.84□□□□□ -0.99
MSL3-210ENST00000468149 GRAPLQ8TC17 118 aaPredicted RBP8.84□□□□□ -0.99
MSL3-210ENST00000468149 NLRP7Q8WX94 980 aa8.84□□□□□ -0.99
MSL3-210ENST00000468149 SRCIN1Q9C0H9 1055 aa8.84□□□□□ -0.99
MSL3-210ENST00000468149 TAOK3Q9H2K8 898 aa8.84□□□□□ -0.99
MSL3-210ENST00000468149 PSME4Q14997 1843 aa8.84□□□□□ -0.99
MSL3-210ENST00000468149 RTL9Q8NET4 1388 aa8.84□□□□□ -0.99
MSL3-210ENST00000468149 SCN4AP35499 1836 aa8.84□□□□□ -0.99
MSL3-210ENST00000468149 hCG_2014768A0A024R1R8 64 aa8.83□□□□□ -1
MSL3-210ENST00000468149 NFKBIEO00221 500 aa8.83□□□□□ -1
MSL3-210ENST00000468149 GRM8O00222 908 aa8.83□□□□□ -1
MSL3-210ENST00000468149 PPEF1O14829 653 aaPredicted RBP8.83□□□□□ -1
MSL3-210ENST00000468149 SOX11P35716 441 aa8.83□□□□□ -1
MSL3-210ENST00000468149 CASP7P55210 303 aa8.83□□□□□ -1
MSL3-210ENST00000468149 CTSWP56202 376 aa8.83□□□□□ -1
MSL3-210ENST00000468149 MCCD1P59942 119 aaPredicted RBP8.83□□□□□ -1
MSL3-210ENST00000468149 PTPROQ16827 1216 aa8.83□□□□□ -1
MSL3-210ENST00000468149 HSP90AB4PQ58FF6 505 aa8.83□□□□□ -1
MSL3-210ENST00000468149 SLC4A10Q6U841 1118 aa8.83□□□□□ -1
MSL3-210ENST00000468149 TBC1D9Q6ZT07 1266 aa8.83□□□□□ -1
MSL3-210ENST00000468149 TMX4Q9H1E5 349 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms