RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 FRAT2O75474 233 aaPredicted RBP12.1□□□□□ -0.47
MSH5-213ENST00000468136 IDH1O75874 414 aaKnown RBP12.1□□□□□ -0.47
MSH5-213ENST00000468136 SERPINB2P05120 415 aa12.1□□□□□ -0.47
MSH5-213ENST00000468136 CYP21A2P08686 494 aa12.1□□□□□ -0.47
MSH5-213ENST00000468136 PDE6AP16499 860 aa12.1□□□□□ -0.47
MSH5-213ENST00000468136 HOXA10P31260 410 aaPredicted RBP12.1□□□□□ -0.47
MSH5-213ENST00000468136 RASGRF1Q13972 1273 aa12.1□□□□□ -0.47
MSH5-213ENST00000468136 CERS3Q8IU89 383 aa12.1□□□□□ -0.47
MSH5-213ENST00000468136 HELBQ8NG08 1087 aaPredicted RBP12.1□□□□□ -0.47
MSH5-213ENST00000468136 CELF1Q92879 486 aaKnown RBP12.1□□□□□ -0.47
MSH5-213ENST00000468136 TNPO1Q92973 898 aaKnown RBP12.1□□□□□ -0.47
MSH5-213ENST00000468136 CRAMP1Q96RY5 1269 aa12.1□□□□□ -0.47
MSH5-213ENST00000468136 NACAP1Q9BZK3 213 aa12.1□□□□□ -0.47
MSH5-213ENST00000468136 KIF3AQ9Y496 699 aa12.1□□□□□ -0.47
MSH5-213ENST00000468136 ATP6V1DQ9Y5K8 247 aa12.1□□□□□ -0.47
MSH5-213ENST00000468136 NDUFB9Q9Y6M9 179 aa12.1□□□□□ -0.47
MSH5-213ENST00000468136 XDHP47989 1333 aa12.1□□□□□ -0.47
MSH5-213ENST00000468136 APBA3O96018 575 aa12.09□□□□□ -0.47
MSH5-213ENST00000468136 ADCK5Q3MIX3 580 aa12.09□□□□□ -0.47
MSH5-213ENST00000468136 SPTY2D1Q68D10 685 aaPredicted RBP12.09□□□□□ -0.47
MSH5-213ENST00000468136 PRR5LQ6MZQ0 368 aa12.09□□□□□ -0.47
MSH5-213ENST00000468136 RGS22Q8NE09 1264 aa12.09□□□□□ -0.47
MSH5-213ENST00000468136 AKT1S1Q96B36 256 aa12.09□□□□□ -0.47
MSH5-213ENST00000468136 AIDAQ96BJ3 306 aa12.09□□□□□ -0.47
MSH5-213ENST00000468136 SEC62Q99442 399 aaKnown RBP12.09□□□□□ -0.47
MSH5-213ENST00000468136 MTA3Q9BTC8 594 aa12.09□□□□□ -0.47
MSH5-213ENST00000468136 PIH1D3Q9NQM4 214 aaKnown RBP12.09□□□□□ -0.47
MSH5-213ENST00000468136 TFCP2L1Q9NZI6 479 aa12.09□□□□□ -0.47
MSH5-213ENST00000468136 SMC3Q9UQE7 1217 aa12.09□□□□□ -0.47
MSH5-213ENST00000468136 MYH7P12883 1935 aa12.09□□□□□ -0.47
MSH5-213ENST00000468136 ZNF532Q9HCE3 1301 aa12.09□□□□□ -0.47
MSH5-213ENST00000468136 TCRBV5S4A2TA0A5A2 114 aa12.08□□□□□ -0.48
MSH5-213ENST00000468136 PATL2C9JE40 543 aaKnown RBP12.08□□□□□ -0.48
MSH5-213ENST00000468136 M0R2C6 588 aa12.08□□□□□ -0.48
MSH5-213ENST00000468136 ZNF213O14771 459 aa12.08□□□□□ -0.48
MSH5-213ENST00000468136 ATP2B4P23634 1241 aa12.08□□□□□ -0.48
MSH5-213ENST00000468136 HIBADHP31937 336 aaKnown RBP12.08□□□□□ -0.48
MSH5-213ENST00000468136 BCAMP50895 628 aa12.08□□□□□ -0.48
MSH5-213ENST00000468136 TRDNQ13061 729 aa12.08□□□□□ -0.48
MSH5-213ENST00000468136 GIMAP6Q6P9H5 292 aa12.08□□□□□ -0.48
MSH5-213ENST00000468136 CCDC129Q6ZRS4 1044 aa12.08□□□□□ -0.48
MSH5-213ENST00000468136 C3orf67Q6ZVT6 689 aa12.08□□□□□ -0.48
MSH5-213ENST00000468136 LLPHQ9BRT6 129 aaKnown RBP12.08□□□□□ -0.48
MSH5-213ENST00000468136 BRIP1Q9BX63 1249 aa12.08□□□□□ -0.48
MSH5-213ENST00000468136 AGXT2Q9BYV1 514 aa12.08□□□□□ -0.48
MSH5-213ENST00000468136 LRP2BPQ9P2M1 347 aa12.08□□□□□ -0.48
MSH5-213ENST00000468136 BRD1O95696 1058 aa12.07□□□□□ -0.48
MSH5-213ENST00000468136 FGAP02671 866 aa12.07□□□□□ -0.48
MSH5-213ENST00000468136 PCP11498 1178 aaKnown RBP12.07□□□□□ -0.48
MSH5-213ENST00000468136 FGD1P98174 961 aa12.07□□□□□ -0.48
MSH5-213ENST00000468136 PROM2Q8N271 834 aa12.07□□□□□ -0.48
MSH5-213ENST00000468136 NCOA7Q8NI08 942 aa12.07□□□□□ -0.48
MSH5-213ENST00000468136 FAM84BQ96KN1 310 aaPredicted RBP12.07□□□□□ -0.48
MSH5-213ENST00000468136 STRBPQ96SI9 672 aaKnown RBP12.07□□□□□ -0.48
MSH5-213ENST00000468136 PUS7LQ9H0K6 701 aaKnown RBP12.07□□□□□ -0.48
MSH5-213ENST00000468136 CNNM2Q9H8M5 875 aa12.07□□□□□ -0.48
MSH5-213ENST00000468136 SALL1Q9NSC2 1324 aa12.07□□□□□ -0.48
MSH5-213ENST00000468136 DUOX1Q9NRD9 1551 aa12.06□□□□□ -0.48
MSH5-213ENST00000468136 E7EWF7 191 aa12.06□□□□□ -0.48
MSH5-213ENST00000468136 POLRMTO00411 1230 aaKnown RBP12.06□□□□□ -0.48
MSH5-213ENST00000468136 MCM5P33992 734 aa12.06□□□□□ -0.48
MSH5-213ENST00000468136 PDE6BP35913 854 aa12.06□□□□□ -0.48
MSH5-213ENST00000468136 EVCP57679 992 aa12.06□□□□□ -0.48
MSH5-213ENST00000468136 EXOSC10Q01780 885 aaKnown RBP12.06□□□□□ -0.48
MSH5-213ENST00000468136 CSPP1Q1MSJ5 1256 aa12.06□□□□□ -0.48
MSH5-213ENST00000468136 ZNF804AQ7Z570 1209 aa12.06□□□□□ -0.48
MSH5-213ENST00000468136 RALYLQ86SE5 291 aaKnown RBP12.06□□□□□ -0.48
MSH5-213ENST00000468136 AMIGO3Q86WK7 504 aa12.06□□□□□ -0.48
MSH5-213ENST00000468136 MAGEB6Q8N7X4 407 aa12.06□□□□□ -0.48
MSH5-213ENST00000468136 WDR66Q8TBY9 1149 aa12.06□□□□□ -0.48
MSH5-213ENST00000468136 FBXO41Q8TF61 875 aa12.06□□□□□ -0.48
MSH5-213ENST00000468136 ZNF274Q96GC6 653 aaPredicted RBP12.06□□□□□ -0.48
MSH5-213ENST00000468136 TMX4Q9H1E5 349 aaPredicted RBP12.06□□□□□ -0.48
MSH5-213ENST00000468136 RNF41Q9H4P4 317 aaPredicted RBP12.06□□□□□ -0.48
MSH5-213ENST00000468136 FOXD4L1Q9NU39 408 aa12.06□□□□□ -0.48
MSH5-213ENST00000468136 PODXL2Q9NZ53 605 aa12.06□□□□□ -0.48
MSH5-213ENST00000468136 ISY1Q9ULR0 285 aaKnown RBP12.06□□□□□ -0.48
MSH5-213ENST00000468136 DOCK2Q92608 1830 aa12.06□□□□□ -0.48
MSH5-213ENST00000468136 DHX16O60231 1041 aaKnown RBP12.05□□□□□ -0.48
MSH5-213ENST00000468136 BAG4O95429 457 aaKnown RBP12.05□□□□□ -0.48
MSH5-213ENST00000468136 ALDH1B1P30837 517 aa12.05□□□□□ -0.48
MSH5-213ENST00000468136 HMGN5P82970 282 aaKnown RBP12.05□□□□□ -0.48
MSH5-213ENST00000468136 PI16Q6UXB8 463 aa12.05□□□□□ -0.48
MSH5-213ENST00000468136 KLHL34Q8N239 644 aa12.05□□□□□ -0.48
MSH5-213ENST00000468136 ANKIB1Q9P2G1 1089 aa12.05□□□□□ -0.48
MSH5-213ENST00000468136 NPR1P16066 1061 aa12.04□□□□□ -0.48
MSH5-213ENST00000468136 GSTO1P78417 241 aa12.04□□□□□ -0.48
MSH5-213ENST00000468136 TOB2Q14106 344 aaPredicted RBP12.04□□□□□ -0.48
MSH5-213ENST00000468136 ME3Q16798 604 aa12.04□□□□□ -0.48
MSH5-213ENST00000468136 SP8Q8IXZ3 490 aa12.04□□□□□ -0.48
MSH5-213ENST00000468136 TMEM87BQ96K49 555 aa12.04□□□□□ -0.48
MSH5-213ENST00000468136 KRT23Q9C075 422 aa12.04□□□□□ -0.48
MSH5-213ENST00000468136 NAPBQ9H115 298 aa12.04□□□□□ -0.48
MSH5-213ENST00000468136 WWC3Q9ULE0 1092 aa12.04□□□□□ -0.48
MSH5-213ENST00000468136 PARP3Q9Y6F1 533 aa12.04□□□□□ -0.48
MSH5-213ENST00000468136 A0A1B0GUL6 1792 aa12.04□□□□□ -0.48
MSH5-213ENST00000468136 STX6O43752 255 aa12.03□□□□□ -0.48
MSH5-213ENST00000468136 PFKFB2O60825 505 aa12.03□□□□□ -0.48
MSH5-213ENST00000468136 APPP05067 770 aa12.03□□□□□ -0.48
MSH5-213ENST00000468136 LDHCP07864 332 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms