RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 NPR1P16066 1061 aa24.68■■□□□ 1.54
TMEM53-207ENST00000468117 HIBADHP31937 336 aaKnown RBP24.68■■□□□ 1.54
TMEM53-207ENST00000468117 KCNB2Q92953 911 aa24.68■■□□□ 1.54
TMEM53-207ENST00000468117 GOLGB1Q14789 3259 aaKnown RBP24.68■■□□□ 1.54
TMEM53-207ENST00000468117 PDE6AP16499 860 aa24.68■■□□□ 1.54
TMEM53-207ENST00000468117 CCDC125Q86Z20 511 aa24.68■■□□□ 1.54
TMEM53-207ENST00000468117 ZNF532Q9HCE3 1301 aa24.67■■□□□ 1.54
TMEM53-207ENST00000468117 SLC27A2O14975 620 aa24.67■■□□□ 1.54
TMEM53-207ENST00000468117 MAP3K12Q12852 859 aa24.67■■□□□ 1.54
TMEM53-207ENST00000468117 PPEF1O14829 653 aaPredicted RBP24.66■■□□□ 1.54
TMEM53-207ENST00000468117 FRAT2O75474 233 aaPredicted RBP24.66■■□□□ 1.54
TMEM53-207ENST00000468117 ZKSCAN1P17029 563 aaPredicted RBP24.66■■□□□ 1.54
TMEM53-207ENST00000468117 UBE3CQ15386 1083 aa24.66■■□□□ 1.54
TMEM53-207ENST00000468117 GPR101Q96P66 508 aaPredicted RBP24.66■■□□□ 1.54
TMEM53-207ENST00000468117 SLKQ9H2G2 1235 aaPredicted RBP24.66■■□□□ 1.54
TMEM53-207ENST00000468117 DENND2AQ9ULE3 1009 aa24.66■■□□□ 1.54
TMEM53-207ENST00000468117 HSPD1P10809 573 aaKnown RBP24.66■■□□□ 1.54
TMEM53-207ENST00000468117 ADCK5Q3MIX3 580 aa24.66■■□□□ 1.54
TMEM53-207ENST00000468117 TCRBV5S4A2TA0A5A2 114 aa24.65■■□□□ 1.54
TMEM53-207ENST00000468117 RNF20Q5VTR2 975 aa24.65■■□□□ 1.54
TMEM53-207ENST00000468117 MAGEB6Q8N7X4 407 aa24.65■■□□□ 1.54
TMEM53-207ENST00000468117 LRP2BPQ9P2M1 347 aa24.65■■□□□ 1.54
TMEM53-207ENST00000468117 U3KPZ7 1027 aaPredicted RBP24.65■■□□□ 1.54
TMEM53-207ENST00000468117 LTBP1Q14766 1721 aa24.65■■□□□ 1.54
TMEM53-207ENST00000468117 UFL1O94874 794 aa24.64■■□□□ 1.54
TMEM53-207ENST00000468117 MASTLQ96GX5 879 aa24.64■■□□□ 1.54
TMEM53-207ENST00000468117 DSCC1Q9BVC3 393 aa24.64■■□□□ 1.54
TMEM53-207ENST00000468117 ABCF2Q9UG63 623 aa24.64■■□□□ 1.54
TMEM53-207ENST00000468117 TAF6LQ9Y6J9 622 aa24.64■■□□□ 1.54
TMEM53-207ENST00000468117 SEMA3EO15041 775 aa24.64■■□□□ 1.53
TMEM53-207ENST00000468117 GPAA1O43292 621 aa24.64■■□□□ 1.53
TMEM53-207ENST00000468117 TMC4Q7Z404 712 aa24.64■■□□□ 1.53
TMEM53-207ENST00000468117 ALDH1B1P30837 517 aa24.63■■□□□ 1.53
TMEM53-207ENST00000468117 SP8Q8IXZ3 490 aa24.63■■□□□ 1.53
TMEM53-207ENST00000468117 JAKMIP1Q96N16 626 aaKnown RBP24.63■■□□□ 1.53
TMEM53-207ENST00000468117 GGA1Q9UJY5 639 aa24.63■■□□□ 1.53
TMEM53-207ENST00000468117 CASTP20810 708 aaKnown RBP24.62■■□□□ 1.53
TMEM53-207ENST00000468117 C2CD5Q86YS7 1000 aa24.62■■□□□ 1.53
TMEM53-207ENST00000468117 PODXL2Q9NZ53 605 aa24.62■■□□□ 1.53
TMEM53-207ENST00000468117 ATP6V0A2Q9Y487 856 aa24.62■■□□□ 1.53
TMEM53-207ENST00000468117 CPA1P15085 419 aa24.62■■□□□ 1.53
TMEM53-207ENST00000468117 ATP2B4P23634 1241 aa24.62■■□□□ 1.53
TMEM53-207ENST00000468117 ZNF622Q969S3 477 aaKnown RBP eCLIP24.62■■□□□ 1.53
TMEM53-207ENST00000468117 FOXP2O15409 715 aa24.61■■□□□ 1.53
TMEM53-207ENST00000468117 POLLQ9UGP5 575 aa24.61■■□□□ 1.53
TMEM53-207ENST00000468117 CYP21A2P08686 494 aa24.61■■□□□ 1.53
TMEM53-207ENST00000468117 OLFM4Q6UX06 510 aa24.61■■□□□ 1.53
TMEM53-207ENST00000468117 TBC1D16Q8TBP0 767 aa24.61■■□□□ 1.53
TMEM53-207ENST00000468117 H0YIN7 160 aa24.6■■□□□ 1.53
TMEM53-207ENST00000468117 CHAF1AQ13111 956 aaPredicted RBP24.6■■□□□ 1.53
TMEM53-207ENST00000468117 C15orf52Q6ZUT6 534 aaKnown RBP24.6■■□□□ 1.53
TMEM53-207ENST00000468117 RAI14Q9P0K7 980 aa24.6■■□□□ 1.53
TMEM53-207ENST00000468117 TM6SF1Q9BZW5 370 aa24.59■■□□□ 1.53
TMEM53-207ENST00000468117 JAG2Q9Y219 1238 aa24.59■■□□□ 1.53
TMEM53-207ENST00000468117 CCDC88AQ3V6T2 1871 aa24.59■■□□□ 1.53
TMEM53-207ENST00000468117 PDS5AQ29RF7 1337 aaKnown RBP24.59■■□□□ 1.53
TMEM53-207ENST00000468117 RPAP1Q9BWH6 1393 aaPredicted RBP24.59■■□□□ 1.53
TMEM53-207ENST00000468117 SLX4Q8IY92 1834 aa24.59■■□□□ 1.53
TMEM53-207ENST00000468117 CHRNA5P30532 468 aa24.59■■□□□ 1.53
TMEM53-207ENST00000468117 TSGA10IPQ3SY00 556 aa24.59■■□□□ 1.53
TMEM53-207ENST00000468117 NOL8Q76FK4 1167 aaKnown RBP24.59■■□□□ 1.53
TMEM53-207ENST00000468117 ZNF804AQ7Z570 1209 aa24.59■■□□□ 1.53
TMEM53-207ENST00000468117 ZSWIM6Q9HCJ5 1215 aa24.59■■□□□ 1.53
TMEM53-207ENST00000468117 C6orf229H3BNL8 230 aa24.58■■□□□ 1.53
TMEM53-207ENST00000468117 HSP90AA1P07900 732 aaKnown RBP24.58■■□□□ 1.53
TMEM53-207ENST00000468117 AIDAQ96BJ3 306 aa24.58■■□□□ 1.53
TMEM53-207ENST00000468117 FOXD4L1Q9NU39 408 aa24.58■■□□□ 1.53
TMEM53-207ENST00000468117 LAMA4Q16363 1823 aa24.58■■□□□ 1.53
TMEM53-207ENST00000468117 A0A0G2JLW4 131 aa24.57■■□□□ 1.52
TMEM53-207ENST00000468117 COL9A3Q14050 684 aaPredicted RBP24.57■■□□□ 1.52
TMEM53-207ENST00000468117 SLC16A10Q8TF71 515 aa24.57■■□□□ 1.52
TMEM53-207ENST00000468117 TTC14Q96N46 770 aa24.57■■□□□ 1.52
TMEM53-207ENST00000468117 TTLL5Q6EMB2 1281 aa24.57■■□□□ 1.52
TMEM53-207ENST00000468117 TDRD7Q8NHU6 1098 aaKnown RBP24.57■■□□□ 1.52
TMEM53-207ENST00000468117 CYP46A1Q9Y6A2 500 aa24.57■■□□□ 1.52
TMEM53-207ENST00000468117 MCM2P49736 904 aa24.56■■□□□ 1.52
TMEM53-207ENST00000468117 STYK1Q6J9G0 422 aa24.56■■□□□ 1.52
TMEM53-207ENST00000468117 RUFY3Q7L099 469 aa24.56■■□□□ 1.52
TMEM53-207ENST00000468117 DUOX1Q9NRD9 1551 aa24.56■■□□□ 1.52
TMEM53-207ENST00000468117 MBD4O95243 580 aa24.56■■□□□ 1.52
TMEM53-207ENST00000468117 FGAP02671 866 aa24.56■■□□□ 1.52
TMEM53-207ENST00000468117 PSMA5P28066 241 aa24.56■■□□□ 1.52
TMEM53-207ENST00000468117 ADGRA1Q86SQ6 560 aa24.56■■□□□ 1.52
TMEM53-207ENST00000468117 STRBPQ96SI9 672 aaKnown RBP24.56■■□□□ 1.52
TMEM53-207ENST00000468117 ZBTB22O15209 634 aa24.55■■□□□ 1.52
TMEM53-207ENST00000468117 CYP7A1P22680 504 aa24.55■■□□□ 1.52
TMEM53-207ENST00000468117 AK2P54819 239 aa24.54■■□□□ 1.52
TMEM53-207ENST00000468117 KRT32Q14532 448 aa24.54■■□□□ 1.52
TMEM53-207ENST00000468117 MPNDQ8N594 471 aa24.54■■□□□ 1.52
TMEM53-207ENST00000468117 MIGA1Q8NAN2 632 aa24.54■■□□□ 1.52
TMEM53-207ENST00000468117 IL27Q8NEV9 243 aa24.54■■□□□ 1.52
TMEM53-207ENST00000468117 ZNF384Q8TF68 577 aa24.54■■□□□ 1.52
TMEM53-207ENST00000468117 TMX3Q96JJ7 454 aa24.54■■□□□ 1.52
TMEM53-207ENST00000468117 ARMT1Q9H993 441 aa24.54■■□□□ 1.52
TMEM53-207ENST00000468117 CD209Q9NNX6 404 aa24.54■■□□□ 1.52
TMEM53-207ENST00000468117 CHD4Q14839 1912 aa24.54■■□□□ 1.52
TMEM53-207ENST00000468117 PDRG1Q9NUG6 133 aa24.54■■□□□ 1.52
TMEM53-207ENST00000468117 PRDX5P30044 214 aa24.53■■□□□ 1.52
TMEM53-207ENST00000468117 BLOC1S2Q6QNY1 142 aa24.53■■□□□ 1.52
TMEM53-207ENST00000468117 TMX4Q9H1E5 349 aaPredicted RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms