RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 HDAC9Q9UKV0 1011 aa23.18■■□□□ 1.3
YBX1-204ENST00000467957 FMR1Q06787 632 aaKnown RBP eCLIP23.17■■□□□ 1.3
YBX1-204ENST00000467957 SCARF1Q14162 830 aa23.17■■□□□ 1.3
YBX1-204ENST00000467957 ATP2B3Q16720 1220 aa23.17■■□□□ 1.3
YBX1-204ENST00000467957 PITPNM2Q9BZ72 1349 aa23.16■■□□□ 1.3
YBX1-204ENST00000467957 ATP8B2P98198 1209 aa23.16■■□□□ 1.3
YBX1-204ENST00000467957 POLA2Q14181 598 aa23.16■■□□□ 1.3
YBX1-204ENST00000467957 CST9Q5W186 159 aa23.16■■□□□ 1.3
YBX1-204ENST00000467957 GGA3Q9NZ52 723 aa23.16■■□□□ 1.3
YBX1-204ENST00000467957 POLR2AP24928 1970 aaKnown RBP23.16■■□□□ 1.3
YBX1-204ENST00000467957 BCAMP50895 628 aa23.15■■□□□ 1.3
YBX1-204ENST00000467957 KRT26Q7Z3Y9 468 aa23.15■■□□□ 1.3
YBX1-204ENST00000467957 USP48Q86UV5 1035 aa23.15■■□□□ 1.3
YBX1-204ENST00000467957 SSH3Q8TE77 659 aa23.15■■□□□ 1.3
YBX1-204ENST00000467957 ASTN2O75129 1339 aaPredicted RBP23.14■■□□□ 1.3
YBX1-204ENST00000467957 ARAP2Q8WZ64 1704 aa23.14■■□□□ 1.3
YBX1-204ENST00000467957 WNT10BO00744 389 aa23.14■■□□□ 1.29
YBX1-204ENST00000467957 MVPQ14764 893 aaKnown RBP23.14■■□□□ 1.29
YBX1-204ENST00000467957 MFSD14BQ5SR56 506 aa23.14■■□□□ 1.29
YBX1-204ENST00000467957 ANGEL2Q5VTE6 544 aaKnown RBP23.14■■□□□ 1.29
YBX1-204ENST00000467957 MTMR14Q8NCE2 650 aa23.14■■□□□ 1.29
YBX1-204ENST00000467957 ZBED3Q96IU2 234 aaPredicted RBP23.14■■□□□ 1.29
YBX1-204ENST00000467957 JAG2Q9Y219 1238 aa23.14■■□□□ 1.29
YBX1-204ENST00000467957 ZBTB22O15209 634 aa23.13■■□□□ 1.29
YBX1-204ENST00000467957 NBPF9Q3BBW0 867 aa23.13■■□□□ 1.29
YBX1-204ENST00000467957 SULF1Q8IWU6 871 aa23.13■■□□□ 1.29
YBX1-204ENST00000467957 JMYQ8N9B5 988 aa23.13■■□□□ 1.29
YBX1-204ENST00000467957 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.13■■□□□ 1.29
YBX1-204ENST00000467957 C1orf115Q9H7X2 142 aa23.13■■□□□ 1.29
YBX1-204ENST00000467957 CNTNAP1P78357 1384 aa23.13■■□□□ 1.29
YBX1-204ENST00000467957 FRAT2O75474 233 aaPredicted RBP23.12■■□□□ 1.29
YBX1-204ENST00000467957 PDE3AQ14432 1141 aa23.12■■□□□ 1.29
YBX1-204ENST00000467957 TBC1D22AQ8WUA7 517 aa23.12■■□□□ 1.29
YBX1-204ENST00000467957 DDX19BQ9UMR2 479 aa23.12■■□□□ 1.29
YBX1-204ENST00000467957 IQSEC3Q9UPP2 1182 aaPredicted RBP23.12■■□□□ 1.29
YBX1-204ENST00000467957 AKAP2Q9Y2D5 859 aa23.12■■□□□ 1.29
YBX1-204ENST00000467957 RASSF10A6NK89 507 aa23.11■■□□□ 1.29
YBX1-204ENST00000467957 CELF2O95319 508 aaKnown RBP23.11■■□□□ 1.29
YBX1-204ENST00000467957 TFCP2Q12800 502 aa23.11■■□□□ 1.29
YBX1-204ENST00000467957 G3BP1Q13283 466 aaKnown RBP eCLIP23.11■■□□□ 1.29
YBX1-204ENST00000467957 ADM5C9JUS6 153 aa23.1■■□□□ 1.29
YBX1-204ENST00000467957 DLGAP5Q15398 846 aa23.1■■□□□ 1.29
YBX1-204ENST00000467957 COG6Q9Y2V7 657 aa23.1■■□□□ 1.29
YBX1-204ENST00000467957 F8W031 263 aaPredicted RBP23.09■■□□□ 1.29
YBX1-204ENST00000467957 CHAF1AQ13111 956 aaPredicted RBP23.09■■□□□ 1.29
YBX1-204ENST00000467957 CEP85Q6P2H3 762 aa23.09■■□□□ 1.29
YBX1-204ENST00000467957 CHMP4BQ9H444 224 aaKnown RBP23.09■■□□□ 1.29
YBX1-204ENST00000467957 GNL3LQ9NVN8 582 aaKnown RBP23.09■■□□□ 1.29
YBX1-204ENST00000467957 MKRN1Q9UHC7 482 aaKnown RBP23.09■■□□□ 1.29
YBX1-204ENST00000467957 ABT1Q9ULW3 272 aaKnown RBP23.09■■□□□ 1.29
YBX1-204ENST00000467957 TLL2Q9Y6L7 1015 aa23.09■■□□□ 1.29
YBX1-204ENST00000467957 MYH13Q9UKX3 1938 aa23.08■■□□□ 1.29
YBX1-204ENST00000467957 A0A1B0GUL7 405 aa23.08■■□□□ 1.29
YBX1-204ENST00000467957 SEMA3EO15041 775 aa23.08■■□□□ 1.29
YBX1-204ENST00000467957 TIMM10P62072 90 aa23.08■■□□□ 1.29
YBX1-204ENST00000467957 DEFB115Q30KQ5 88 aa23.08■■□□□ 1.29
YBX1-204ENST00000467957 CFAP100Q494V2 611 aa23.08■■□□□ 1.29
YBX1-204ENST00000467957 DLK2Q6UY11 383 aa23.08■■□□□ 1.29
YBX1-204ENST00000467957 ZBTB40Q9NUA8 1239 aa23.08■■□□□ 1.29
YBX1-204ENST00000467957 SERPINA10Q9UK55 444 aa23.08■■□□□ 1.29
YBX1-204ENST00000467957 TTF2Q9UNY4 1162 aaKnown RBP23.08■■□□□ 1.29
YBX1-204ENST00000467957 NOP58Q9Y2X3 529 aaKnown RBP23.08■■□□□ 1.29
YBX1-204ENST00000467957 SUGT1Q9Y2Z0 365 aa23.08■■□□□ 1.29
YBX1-204ENST00000467957 WDR66Q8TBY9 1149 aa23.07■■□□□ 1.28
YBX1-204ENST00000467957 YTHDC1Q96MU7 727 aaKnown RBP23.07■■□□□ 1.28
YBX1-204ENST00000467957 ZNF408Q9H9D4 720 aa23.07■■□□□ 1.28
YBX1-204ENST00000467957 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.07■■□□□ 1.28
YBX1-204ENST00000467957 ECM29Q5VYK3 1845 aa23.07■■□□□ 1.28
YBX1-204ENST00000467957 SPDYE2BA6NHP3 402 aa23.06■■□□□ 1.28
YBX1-204ENST00000467957 SPDYE6P0CI01 402 aa23.06■■□□□ 1.28
YBX1-204ENST00000467957 ADORA1P30542 326 aa23.06■■□□□ 1.28
YBX1-204ENST00000467957 PHKA1P46020 1223 aa23.06■■□□□ 1.28
YBX1-204ENST00000467957 HDLBPQ00341 1268 aaKnown RBP23.06■■□□□ 1.28
YBX1-204ENST00000467957 CCDC102BQ68D86 513 aa23.06■■□□□ 1.28
YBX1-204ENST00000467957 SAPCD2Q86UD0 394 aa23.06■■□□□ 1.28
YBX1-204ENST00000467957 CDCA5Q96FF9 252 aa23.06■■□□□ 1.28
YBX1-204ENST00000467957 HHIPL1Q96JK4 782 aa23.06■■□□□ 1.28
YBX1-204ENST00000467957 COL1A1P02452 1464 aaPredicted RBP23.05■■□□□ 1.28
YBX1-204ENST00000467957 SURF6O75683 361 aaKnown RBP23.05■■□□□ 1.28
YBX1-204ENST00000467957 GRIK5Q16478 980 aa23.05■■□□□ 1.28
YBX1-204ENST00000467957 C20orf194Q5TEA3 1177 aa23.05■■□□□ 1.28
YBX1-204ENST00000467957 APOBEC3FQ8IUX4 373 aaKnown RBP23.05■■□□□ 1.28
YBX1-204ENST00000467957 XAGE2Q96GT9 111 aa23.05■■□□□ 1.28
YBX1-204ENST00000467957 PRMT6Q96LA8 375 aaPredicted RBP23.05■■□□□ 1.28
YBX1-204ENST00000467957 MRIQ9BWK5 157 aa23.05■■□□□ 1.28
YBX1-204ENST00000467957 GPR108Q9NPR9 543 aa23.05■■□□□ 1.28
YBX1-204ENST00000467957 DENND2AQ9ULE3 1009 aa23.05■■□□□ 1.28
YBX1-204ENST00000467957 MYO1BO43795 1136 aa23.04■■□□□ 1.28
YBX1-204ENST00000467957 VEGFBP49765 207 aa23.04■■□□□ 1.28
YBX1-204ENST00000467957 RPAP2Q8IXW5 612 aaPredicted RBP23.04■■□□□ 1.28
YBX1-204ENST00000467957 PCDHAC2Q9Y5I4 1007 aa23.04■■□□□ 1.28
YBX1-204ENST00000467957 PDS5AQ29RF7 1337 aaKnown RBP23.04■■□□□ 1.28
YBX1-204ENST00000467957 GBA2Q9HCG7 927 aaPredicted RBP23.03■■□□□ 1.28
YBX1-204ENST00000467957 MAST3O60307 1309 aa23.03■■□□□ 1.28
YBX1-204ENST00000467957 SALL1Q9NSC2 1324 aa23.03■■□□□ 1.28
YBX1-204ENST00000467957 CRKP46108 304 aa23.02■■□□□ 1.28
YBX1-204ENST00000467957 RBM5P52756 815 aaKnown RBP eCLIP23.02■■□□□ 1.28
YBX1-204ENST00000467957 OS9Q13438 667 aaPredicted RBP23.02■■□□□ 1.28
YBX1-204ENST00000467957 C2orf69Q8N8R5 385 aa23.02■■□□□ 1.28
YBX1-204ENST00000467957 NEUROD6Q96NK8 337 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms