RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 POTEIP0CG38 1075 aa16.8■□□□□ 0.28
SSBP1-206ENST00000467681 POTEJP0CG39 1038 aa16.8■□□□□ 0.28
SSBP1-206ENST00000467681 HIRAP54198 1017 aaPredicted RBP16.8■□□□□ 0.28
SSBP1-206ENST00000467681 FSTL1Q12841 308 aa16.8■□□□□ 0.28
SSBP1-206ENST00000467681 SAMD7Q7Z3H4 446 aa16.8■□□□□ 0.28
SSBP1-206ENST00000467681 ERC1Q8IUD2 1116 aa16.8■□□□□ 0.28
SSBP1-206ENST00000467681 CERS5Q8N5B7 392 aa16.8■□□□□ 0.28
SSBP1-206ENST00000467681 IQSEC3Q9UPP2 1182 aaPredicted RBP16.8■□□□□ 0.28
SSBP1-206ENST00000467681 SCN4AP35499 1836 aa16.8■□□□□ 0.28
SSBP1-206ENST00000467681 ZNF609O15014 1411 aa16.79■□□□□ 0.28
SSBP1-206ENST00000467681 RAB11FIP3O75154 756 aa16.79■□□□□ 0.28
SSBP1-206ENST00000467681 FRAT2O75474 233 aaPredicted RBP16.79■□□□□ 0.28
SSBP1-206ENST00000467681 PHKA1P46020 1223 aa16.79■□□□□ 0.28
SSBP1-206ENST00000467681 AAMPQ13685 434 aa16.79■□□□□ 0.28
SSBP1-206ENST00000467681 TNNI3KQ59H18 835 aa16.79■□□□□ 0.28
SSBP1-206ENST00000467681 CCDC102BQ68D86 513 aa16.79■□□□□ 0.28
SSBP1-206ENST00000467681 CHADLQ6NUI6 762 aa16.79■□□□□ 0.28
SSBP1-206ENST00000467681 JAG2Q9Y219 1238 aa16.79■□□□□ 0.28
SSBP1-206ENST00000467681 CLEC11AQ9Y240 323 aa16.79■□□□□ 0.28
SSBP1-206ENST00000467681 FPGT-TNNI3KV9GXZ4 949 aa16.79■□□□□ 0.28
SSBP1-206ENST00000467681 RBM26Q5T8P6 1007 aaKnown RBP16.78■□□□□ 0.28
SSBP1-206ENST00000467681 OGFOD1Q8N543 542 aa16.78■□□□□ 0.28
SSBP1-206ENST00000467681 RHPN1Q8TCX5 695 aa16.78■□□□□ 0.28
SSBP1-206ENST00000467681 TRPM4Q8TD43 1214 aa16.78■□□□□ 0.28
SSBP1-206ENST00000467681 ZC3H15Q8WU90 426 aaKnown RBP16.78■□□□□ 0.28
SSBP1-206ENST00000467681 PGAP2Q9UHJ9 254 aa16.78■□□□□ 0.28
SSBP1-206ENST00000467681 SEMA3EO15041 775 aa16.77■□□□□ 0.28
SSBP1-206ENST00000467681 CHAF1AQ13111 956 aaPredicted RBP16.77■□□□□ 0.28
SSBP1-206ENST00000467681 TBC1D10BQ4KMP7 808 aaPredicted RBP16.77■□□□□ 0.28
SSBP1-206ENST00000467681 MFSD14BQ5SR56 506 aa16.77■□□□□ 0.28
SSBP1-206ENST00000467681 GORABQ5T7V8 394 aa16.77■□□□□ 0.28
SSBP1-206ENST00000467681 KIAA0825Q8IV33 1275 aa16.77■□□□□ 0.28
SSBP1-206ENST00000467681 TBC1D22AQ8WUA7 517 aa16.77■□□□□ 0.28
SSBP1-206ENST00000467681 EAF2Q96CJ1 260 aaPredicted RBP16.77■□□□□ 0.28
SSBP1-206ENST00000467681 DCTPP1Q9H773 170 aa16.77■□□□□ 0.28
SSBP1-206ENST00000467681 A0A1B0GUL6 1792 aa16.77■□□□□ 0.27
SSBP1-206ENST00000467681 EGFRP00533 1210 aa16.76■□□□□ 0.27
SSBP1-206ENST00000467681 CNTROBQ8N137 903 aa16.76■□□□□ 0.27
SSBP1-206ENST00000467681 WDR66Q8TBY9 1149 aa16.76■□□□□ 0.27
SSBP1-206ENST00000467681 KIF1BPQ96EK5 621 aa16.76■□□□□ 0.27
SSBP1-206ENST00000467681 MYOZ2Q9NPC6 264 aa16.76■□□□□ 0.27
SSBP1-206ENST00000467681 HDAC9Q9UKV0 1011 aa16.76■□□□□ 0.27
SSBP1-206ENST00000467681 DENND2AQ9ULE3 1009 aa16.76■□□□□ 0.27
SSBP1-206ENST00000467681 ITGBL1O95965 494 aaPredicted RBP16.75■□□□□ 0.27
SSBP1-206ENST00000467681 KIF4BQ2VIQ3 1234 aa16.75■□□□□ 0.27
SSBP1-206ENST00000467681 EXOC6Q8TAG9 804 aa16.75■□□□□ 0.27
SSBP1-206ENST00000467681 DBNDD2Q9BQY9 259 aa16.75■□□□□ 0.27
SSBP1-206ENST00000467681 APBB1O00213 710 aa16.74■□□□□ 0.27
SSBP1-206ENST00000467681 SCARF1Q14162 830 aa16.74■□□□□ 0.27
SSBP1-206ENST00000467681 MAP1SQ66K74 1059 aaPredicted RBP16.74■□□□□ 0.27
SSBP1-206ENST00000467681 MRIQ9BWK5 157 aa16.74■□□□□ 0.27
SSBP1-206ENST00000467681 CCDC8Q9H0W5 538 aaPredicted RBP16.74■□□□□ 0.27
SSBP1-206ENST00000467681 IL1RAPL2Q9NP60 686 aa16.74■□□□□ 0.27
SSBP1-206ENST00000467681 SUGT1Q9Y2Z0 365 aa16.74■□□□□ 0.27
SSBP1-206ENST00000467681 F8W031 263 aaPredicted RBP16.73■□□□□ 0.27
SSBP1-206ENST00000467681 UQCRFS1P1P0C7P4 283 aa16.73■□□□□ 0.27
SSBP1-206ENST00000467681 RASGRF1Q13972 1273 aa16.73■□□□□ 0.27
SSBP1-206ENST00000467681 GRIK5Q16478 980 aa16.73■□□□□ 0.27
SSBP1-206ENST00000467681 CCDC158Q5M9N0 1113 aa16.73■□□□□ 0.27
SSBP1-206ENST00000467681 AACSQ86V21 672 aa16.73■□□□□ 0.27
SSBP1-206ENST00000467681 CLASRPQ8N2M8 674 aaKnown RBP16.73■□□□□ 0.27
SSBP1-206ENST00000467681 MTMR14Q8NCE2 650 aa16.73■□□□□ 0.27
SSBP1-206ENST00000467681 ZBED3Q96IU2 234 aaPredicted RBP16.73■□□□□ 0.27
SSBP1-206ENST00000467681 ZNF512BQ96KM6 892 aaPredicted RBP16.73■□□□□ 0.27
SSBP1-206ENST00000467681 DBNLQ9UJU6 430 aaKnown RBP16.73■□□□□ 0.27
SSBP1-206ENST00000467681 TTF2Q9UNY4 1162 aaKnown RBP16.73■□□□□ 0.27
SSBP1-206ENST00000467681 ARID4AP29374 1257 aaPredicted RBP16.72■□□□□ 0.27
SSBP1-206ENST00000467681 PSME4Q14997 1843 aa16.72■□□□□ 0.27
SSBP1-206ENST00000467681 PDS5AQ29RF7 1337 aaKnown RBP16.71■□□□□ 0.27
SSBP1-206ENST00000467681 WNT10BO00744 389 aa16.71■□□□□ 0.27
SSBP1-206ENST00000467681 HDLBPQ00341 1268 aaKnown RBP16.71■□□□□ 0.27
SSBP1-206ENST00000467681 HDAC1Q13547 482 aaPredicted RBP16.71■□□□□ 0.27
SSBP1-206ENST00000467681 DLGAP5Q15398 846 aa16.71■□□□□ 0.27
SSBP1-206ENST00000467681 NBPF9Q3BBW0 867 aa16.71■□□□□ 0.27
SSBP1-206ENST00000467681 CDC37L1Q7L3B6 337 aa16.71■□□□□ 0.27
SSBP1-206ENST00000467681 LRRCC1Q9C099 1032 aa16.71■□□□□ 0.27
SSBP1-206ENST00000467681 HMG20BQ9P0W2 317 aa16.71■□□□□ 0.27
SSBP1-206ENST00000467681 SALL1Q9NSC2 1324 aa16.7■□□□□ 0.26
SSBP1-206ENST00000467681 CFAP100Q494V2 611 aa16.7■□□□□ 0.26
SSBP1-206ENST00000467681 TTC39AQ5SRH9 613 aa16.7■□□□□ 0.26
SSBP1-206ENST00000467681 SPATA5Q8NB90 893 aa16.7■□□□□ 0.26
SSBP1-206ENST00000467681 DCPSQ96C86 337 aaKnown RBP16.7■□□□□ 0.26
SSBP1-206ENST00000467681 PRMT6Q96LA8 375 aaPredicted RBP16.7■□□□□ 0.26
SSBP1-206ENST00000467681 TLR7Q9NYK1 1049 aaKnown RBP16.7■□□□□ 0.26
SSBP1-206ENST00000467681 SERPINA10Q9UK55 444 aa16.7■□□□□ 0.26
SSBP1-206ENST00000467681 ASTN2O75129 1339 aaPredicted RBP16.7■□□□□ 0.26
SSBP1-206ENST00000467681 IFIT2P09913 472 aaKnown RBP16.69■□□□□ 0.26
SSBP1-206ENST00000467681 HSPA6P17066 643 aa16.69■□□□□ 0.26
SSBP1-206ENST00000467681 MCAMP43121 646 aa16.69■□□□□ 0.26
SSBP1-206ENST00000467681 USP48Q86UV5 1035 aa16.69■□□□□ 0.26
SSBP1-206ENST00000467681 ZGPATQ8N5A5 531 aaKnown RBP16.69■□□□□ 0.26
SSBP1-206ENST00000467681 PASKQ96RG2 1323 aa16.69■□□□□ 0.26
SSBP1-206ENST00000467681 LDHBP07195 334 aaKnown RBP16.68■□□□□ 0.26
SSBP1-206ENST00000467681 CRKP46108 304 aa16.68■□□□□ 0.26
SSBP1-206ENST00000467681 RBM5P52756 815 aaKnown RBP eCLIP16.68■□□□□ 0.26
SSBP1-206ENST00000467681 IRX6P78412 446 aaPredicted RBP16.68■□□□□ 0.26
SSBP1-206ENST00000467681 ANGEL2Q5VTE6 544 aaKnown RBP16.68■□□□□ 0.26
SSBP1-206ENST00000467681 SPTY2D1Q68D10 685 aaPredicted RBP16.68■□□□□ 0.26
SSBP1-206ENST00000467681 HHIPL2Q6UWX4 724 aa16.68■□□□□ 0.26
SSBP1-206ENST00000467681 KRT26Q7Z3Y9 468 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms