RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 LRRC24Q50LG9 513 aa18.64■□□□□ 0.57
ATPAF2-204ENST00000467560 ZNF804AQ7Z570 1209 aa18.64■□□□□ 0.57
ATPAF2-204ENST00000467560 KLHDC4Q8TBB5 520 aa18.64■□□□□ 0.57
ATPAF2-204ENST00000467560 USP44Q9H0E7 712 aa18.64■□□□□ 0.57
ATPAF2-204ENST00000467560 PTPRCP08575 1304 aa18.64■□□□□ 0.57
ATPAF2-204ENST00000467560 CA12O43570 354 aa18.63■□□□□ 0.57
ATPAF2-204ENST00000467560 ABHD8Q96I13 439 aa18.63■□□□□ 0.57
ATPAF2-204ENST00000467560 CSRNP1Q96S65 589 aa18.63■□□□□ 0.57
ATPAF2-204ENST00000467560 FZD1Q9UP38 647 aa18.63■□□□□ 0.57
ATPAF2-204ENST00000467560 PAPPA2Q9BXP8 1791 aa18.63■□□□□ 0.57
ATPAF2-204ENST00000467560 FKBP1BP68106 108 aa18.62■□□□□ 0.57
ATPAF2-204ENST00000467560 FAM84BQ96KN1 310 aaPredicted RBP18.62■□□□□ 0.57
ATPAF2-204ENST00000467560 HDAC9Q9UKV0 1011 aa18.62■□□□□ 0.57
ATPAF2-204ENST00000467560 UBE4AQ14139 1066 aa18.61■□□□□ 0.57
ATPAF2-204ENST00000467560 TDRD7Q8NHU6 1098 aaKnown RBP18.61■□□□□ 0.57
ATPAF2-204ENST00000467560 PRMT6Q96LA8 375 aaPredicted RBP18.61■□□□□ 0.57
ATPAF2-204ENST00000467560 RNF186Q9NXI6 227 aa18.61■□□□□ 0.57
ATPAF2-204ENST00000467560 CASP8AP2Q9UKL3 1982 aa18.61■□□□□ 0.57
ATPAF2-204ENST00000467560 MMP14P50281 582 aa18.6■□□□□ 0.57
ATPAF2-204ENST00000467560 PRKG1Q13976 671 aa18.6■□□□□ 0.57
ATPAF2-204ENST00000467560 DLGAP5Q15398 846 aa18.6■□□□□ 0.57
ATPAF2-204ENST00000467560 GRIK5Q16478 980 aa18.6■□□□□ 0.57
ATPAF2-204ENST00000467560 ALDH1L2Q3SY69 923 aa18.6■□□□□ 0.57
ATPAF2-204ENST00000467560 CFAP100Q494V2 611 aa18.6■□□□□ 0.57
ATPAF2-204ENST00000467560 VGLL2Q8N8G2 317 aa18.6■□□□□ 0.57
ATPAF2-204ENST00000467560 MTMR14Q8NCE2 650 aa18.6■□□□□ 0.57
ATPAF2-204ENST00000467560 SMC4Q9NTJ3 1288 aa18.6■□□□□ 0.57
ATPAF2-204ENST00000467560 FAM205AQ6ZU69 1335 aa18.59■□□□□ 0.57
ATPAF2-204ENST00000467560 CLRN2A0PK11 232 aa18.59■□□□□ 0.57
ATPAF2-204ENST00000467560 SPDYE2BA6NHP3 402 aa18.59■□□□□ 0.57
ATPAF2-204ENST00000467560 TRPA1O75762 1119 aa18.59■□□□□ 0.57
ATPAF2-204ENST00000467560 SPDYE6P0CI01 402 aa18.59■□□□□ 0.57
ATPAF2-204ENST00000467560 HIBADHP31937 336 aaKnown RBP18.59■□□□□ 0.57
ATPAF2-204ENST00000467560 FKBP1AP62942 108 aaKnown RBP18.59■□□□□ 0.57
ATPAF2-204ENST00000467560 APOBEC3FQ8IUX4 373 aaKnown RBP18.59■□□□□ 0.57
ATPAF2-204ENST00000467560 DEFB129Q9H1M3 183 aa18.59■□□□□ 0.57
ATPAF2-204ENST00000467560 SSC5DA1L4H1 1573 aa18.59■□□□□ 0.57
ATPAF2-204ENST00000467560 MROH5Q6ZUA9 1318 aa18.58■□□□□ 0.57
ATPAF2-204ENST00000467560 CCER2I3L3R5 266 aa18.58■□□□□ 0.56
ATPAF2-204ENST00000467560 RFX5P48382 616 aaPredicted RBP18.58■□□□□ 0.56
ATPAF2-204ENST00000467560 PTPN12Q05209 780 aaKnown RBP18.58■□□□□ 0.56
ATPAF2-204ENST00000467560 TTLL12Q14166 644 aaPredicted RBP18.58■□□□□ 0.56
ATPAF2-204ENST00000467560 NOB1Q9ULX3 412 aaKnown RBP18.58■□□□□ 0.56
ATPAF2-204ENST00000467560 IQSEC3Q9UPP2 1182 aaPredicted RBP18.58■□□□□ 0.56
ATPAF2-204ENST00000467560 METTL24Q5JXM2 366 aa18.57■□□□□ 0.56
ATPAF2-204ENST00000467560 MFSD14BQ5SR56 506 aa18.57■□□□□ 0.56
ATPAF2-204ENST00000467560 FBXO33Q7Z6M2 555 aa18.57■□□□□ 0.56
ATPAF2-204ENST00000467560 MCOLN1Q9GZU1 580 aa18.57■□□□□ 0.56
ATPAF2-204ENST00000467560 SAGE1Q9NXZ1 904 aa18.57■□□□□ 0.56
ATPAF2-204ENST00000467560 MKRN3Q13064 507 aaKnown RBP18.56■□□□□ 0.56
ATPAF2-204ENST00000467560 PDE8BO95263 885 aa18.55■□□□□ 0.56
ATPAF2-204ENST00000467560 LDLRAD1Q5T700 205 aa18.55■□□□□ 0.56
ATPAF2-204ENST00000467560 TTF2Q9UNY4 1162 aaKnown RBP18.55■□□□□ 0.56
ATPAF2-204ENST00000467560 FGFR2P21802 821 aa18.54■□□□□ 0.56
ATPAF2-204ENST00000467560 NF2P35240 595 aa18.54■□□□□ 0.56
ATPAF2-204ENST00000467560 BCAMP50895 628 aa18.54■□□□□ 0.56
ATPAF2-204ENST00000467560 CDAN1Q8IWY9 1227 aa18.54■□□□□ 0.56
ATPAF2-204ENST00000467560 VEZTQ9HBM0 779 aa18.54■□□□□ 0.56
ATPAF2-204ENST00000467560 ANGEL1Q9UNK9 670 aaKnown RBP18.54■□□□□ 0.56
ATPAF2-204ENST00000467560 RBM5P52756 815 aaKnown RBP eCLIP18.53■□□□□ 0.56
ATPAF2-204ENST00000467560 CHAF1AQ13111 956 aaPredicted RBP18.53■□□□□ 0.56
ATPAF2-204ENST00000467560 DGKZQ13574 1117 aa18.53■□□□□ 0.56
ATPAF2-204ENST00000467560 NBPF12Q5TAG4 269 aaPredicted RBP18.53■□□□□ 0.56
ATPAF2-204ENST00000467560 ATG9AQ7Z3C6 839 aa18.53■□□□□ 0.56
ATPAF2-204ENST00000467560 CLMNQ96JQ2 1002 aa18.53■□□□□ 0.56
ATPAF2-204ENST00000467560 COL1A1P02452 1464 aaPredicted RBP18.52■□□□□ 0.56
ATPAF2-204ENST00000467560 CCDC85CA6NKD9 419 aa18.52■□□□□ 0.56
ATPAF2-204ENST00000467560 EYA2O00167 538 aa18.52■□□□□ 0.56
ATPAF2-204ENST00000467560 RARSP54136 660 aaKnown RBP18.52■□□□□ 0.56
ATPAF2-204ENST00000467560 ARMC9Q7Z3E5 817 aa18.52■□□□□ 0.56
ATPAF2-204ENST00000467560 TDRD3Q9H7E2 651 aaKnown RBP18.52■□□□□ 0.56
ATPAF2-204ENST00000467560 ZNF70Q9UC06 446 aaPredicted RBP18.52■□□□□ 0.56
ATPAF2-204ENST00000467560 CT47B1P0C2W7 299 aaPredicted RBP18.51■□□□□ 0.55
ATPAF2-204ENST00000467560 RASA3Q14644 834 aa18.51■□□□□ 0.55
ATPAF2-204ENST00000467560 SPDYE2Q495Y8 402 aa18.51■□□□□ 0.55
ATPAF2-204ENST00000467560 DZIP1LQ8IYY4 767 aaKnown RBP18.51■□□□□ 0.55
ATPAF2-204ENST00000467560 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.51■□□□□ 0.55
ATPAF2-204ENST00000467560 SERPINA10Q9UK55 444 aa18.51■□□□□ 0.55
ATPAF2-204ENST00000467560 MYO1BO43795 1136 aa18.5■□□□□ 0.55
ATPAF2-204ENST00000467560 TBC1D8O95759 1140 aa18.5■□□□□ 0.55
ATPAF2-204ENST00000467560 CRKP46108 304 aa18.5■□□□□ 0.55
ATPAF2-204ENST00000467560 TM4SF4P48230 202 aa18.5■□□□□ 0.55
ATPAF2-204ENST00000467560 PUM3Q15397 648 aaKnown RBP18.5■□□□□ 0.55
ATPAF2-204ENST00000467560 MAP3K11Q16584 847 aa18.5■□□□□ 0.55
ATPAF2-204ENST00000467560 VPS37DQ86XT2 251 aa18.5■□□□□ 0.55
ATPAF2-204ENST00000467560 REM2Q8IYK8 340 aaPredicted RBP18.5■□□□□ 0.55
ATPAF2-204ENST00000467560 MEIS3Q99687 375 aa18.5■□□□□ 0.55
ATPAF2-204ENST00000467560 R3HDMLQ9H3Y0 253 aa18.5■□□□□ 0.55
ATPAF2-204ENST00000467560 TNNQ9UQP3 1299 aa18.5■□□□□ 0.55
ATPAF2-204ENST00000467560 PPP2R3BQ9Y5P8 575 aa18.5■□□□□ 0.55
ATPAF2-204ENST00000467560 ECM29Q5VYK3 1845 aa18.5■□□□□ 0.55
ATPAF2-204ENST00000467560 AKAP11Q9UKA4 1901 aa18.49■□□□□ 0.55
ATPAF2-204ENST00000467560 UBTFL1P0CB47 393 aaPredicted RBP18.49■□□□□ 0.55
ATPAF2-204ENST00000467560 CAVIN4Q5BKX8 364 aa18.49■□□□□ 0.55
ATPAF2-204ENST00000467560 SPRYD7Q5W111 196 aa18.49■□□□□ 0.55
ATPAF2-204ENST00000467560 TEPSINQ96N21 525 aa18.49■□□□□ 0.55
ATPAF2-204ENST00000467560 API5Q9BZZ5 524 aaKnown RBP18.49■□□□□ 0.55
ATPAF2-204ENST00000467560 SIL1Q9H173 461 aa18.49■□□□□ 0.55
ATPAF2-204ENST00000467560 LRRFIP2Q9Y608 721 aaKnown RBP18.49■□□□□ 0.55
ATPAF2-204ENST00000467560 ARAP2Q8WZ64 1704 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms