RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 ANP32EQ9BTT0 268 aa7.89□□□□□ -1.15
LRCH3-212ENST00000466845 ZFYVE28Q9HCC9 887 aa7.89□□□□□ -1.15
LRCH3-212ENST00000466845 E9PSI1 815 aa7.88□□□□□ -1.15
LRCH3-212ENST00000466845 ZNF211Q13398 564 aaPredicted RBP7.88□□□□□ -1.15
LRCH3-212ENST00000466845 TMCO4Q5TGY1 634 aa7.88□□□□□ -1.15
LRCH3-212ENST00000466845 Q6ZS46 218 aa7.88□□□□□ -1.15
LRCH3-212ENST00000466845 RETREG2Q8NC44 543 aa7.88□□□□□ -1.15
LRCH3-212ENST00000466845 BSNDQ8WZ55 320 aa7.88□□□□□ -1.15
LRCH3-212ENST00000466845 TRAIPQ9BWF2 469 aa7.88□□□□□ -1.15
LRCH3-212ENST00000466845 CEP41Q9BYV8 373 aa7.88□□□□□ -1.15
LRCH3-212ENST00000466845 CCDC87Q9NVE4 849 aa7.88□□□□□ -1.15
LRCH3-212ENST00000466845 CLSPNQ9HAW4 1339 aa7.87□□□□□ -1.15
LRCH3-212ENST00000466845 A6NHS1 94 aa7.87□□□□□ -1.15
LRCH3-212ENST00000466845 H3BRB1 525 aa7.87□□□□□ -1.15
LRCH3-212ENST00000466845 RBM10P98175 930 aaKnown RBP7.87□□□□□ -1.15
LRCH3-212ENST00000466845 CCDC27Q2M243 656 aa7.87□□□□□ -1.15
LRCH3-212ENST00000466845 NXPE3Q969Y0 559 aa7.87□□□□□ -1.15
LRCH3-212ENST00000466845 OSMRQ99650 979 aa7.87□□□□□ -1.15
LRCH3-212ENST00000466845 TUT1Q9H6E5 874 aaKnown RBP7.87□□□□□ -1.15
LRCH3-212ENST00000466845 ANO2Q9NQ90 1003 aa7.87□□□□□ -1.15
LRCH3-212ENST00000466845 EREGO14944 169 aa7.86□□□□□ -1.15
LRCH3-212ENST00000466845 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.86□□□□□ -1.15
LRCH3-212ENST00000466845 GALNT11Q8NCW6 608 aa7.86□□□□□ -1.15
LRCH3-212ENST00000466845 BHLHE41Q9C0J9 482 aaPredicted RBP7.86□□□□□ -1.15
LRCH3-212ENST00000466845 BICRAQ9NZM4 1560 aa7.85□□□□□ -1.15
LRCH3-212ENST00000466845 BRD1O95696 1058 aa7.85□□□□□ -1.15
LRCH3-212ENST00000466845 EPHA1P21709 976 aa7.85□□□□□ -1.15
LRCH3-212ENST00000466845 UVSSAQ2YD98 709 aa7.85□□□□□ -1.15
LRCH3-212ENST00000466845 SOX17Q9H6I2 414 aaPredicted RBP7.85□□□□□ -1.15
LRCH3-212ENST00000466845 SH2B1Q9NRF2 756 aaPredicted RBP7.85□□□□□ -1.15
LRCH3-212ENST00000466845 SOX13Q9UN79 622 aa7.85□□□□□ -1.15
LRCH3-212ENST00000466845 SCRIBQ14160 1630 aa7.85□□□□□ -1.15
LRCH3-212ENST00000466845 SERPINB4P48594 390 aa7.84□□□□□ -1.15
LRCH3-212ENST00000466845 ARHGAP4P98171 946 aa7.84□□□□□ -1.15
LRCH3-212ENST00000466845 SETQ01105 290 aaPredicted RBP7.84□□□□□ -1.15
LRCH3-212ENST00000466845 ECM1Q16610 540 aa7.84□□□□□ -1.15
LRCH3-212ENST00000466845 DUOXA2Q1HG44 320 aa7.84□□□□□ -1.15
LRCH3-212ENST00000466845 PRSS36Q5K4E3 855 aa7.84□□□□□ -1.15
LRCH3-212ENST00000466845 GALNT12Q8IXK2 581 aa7.84□□□□□ -1.15
LRCH3-212ENST00000466845 MEGF10Q96KG7 1140 aa7.84□□□□□ -1.15
LRCH3-212ENST00000466845 PLCD4Q9BRC7 762 aa7.84□□□□□ -1.15
LRCH3-212ENST00000466845 ZKSCAN3Q9BRR0 538 aa7.84□□□□□ -1.15
LRCH3-212ENST00000466845 PRDM10Q9NQV6 1147 aa7.84□□□□□ -1.15
LRCH3-212ENST00000466845 GNEQ9Y223 722 aaKnown RBP7.84□□□□□ -1.15
LRCH3-212ENST00000466845 TM4SF5O14894 197 aa7.83□□□□□ -1.16
LRCH3-212ENST00000466845 GSC2O15499 205 aa7.83□□□□□ -1.16
LRCH3-212ENST00000466845 C19orf57Q0VDD7 668 aa7.83□□□□□ -1.16
LRCH3-212ENST00000466845 ZMYM1Q5SVZ6 1142 aa7.83□□□□□ -1.16
LRCH3-212ENST00000466845 PRR23CQ6ZRP0 262 aa7.83□□□□□ -1.16
LRCH3-212ENST00000466845 FAM129BQ96TA1 746 aa7.83□□□□□ -1.16
LRCH3-212ENST00000466845 DNAJC25Q9H1X3 360 aa7.83□□□□□ -1.16
LRCH3-212ENST00000466845 FOXD3Q9UJU5 478 aaPredicted RBP7.83□□□□□ -1.16
LRCH3-212ENST00000466845 ITGB7P26010 798 aa7.82□□□□□ -1.16
LRCH3-212ENST00000466845 IKBKEQ14164 716 aa7.82□□□□□ -1.16
LRCH3-212ENST00000466845 FOXD4L6Q3SYB3 417 aaPredicted RBP7.82□□□□□ -1.16
LRCH3-212ENST00000466845 FOXD4L3Q6VB84 417 aaPredicted RBP7.82□□□□□ -1.16
LRCH3-212ENST00000466845 ACAD11Q709F0 780 aa7.82□□□□□ -1.16
LRCH3-212ENST00000466845 AEBP1Q8IUX7 1158 aa7.82□□□□□ -1.16
LRCH3-212ENST00000466845 ZNF526Q8TF50 670 aaPredicted RBP7.82□□□□□ -1.16
LRCH3-212ENST00000466845 KLHDC7BQ96G42 594 aa7.82□□□□□ -1.16
LRCH3-212ENST00000466845 DMRTB1Q96MA1 342 aa7.82□□□□□ -1.16
LRCH3-212ENST00000466845 MEGF11A6BM72 1044 aa7.81□□□□□ -1.16
LRCH3-212ENST00000466845 ALX3O95076 343 aa7.81□□□□□ -1.16
LRCH3-212ENST00000466845 GLB1P16278 677 aa7.81□□□□□ -1.16
LRCH3-212ENST00000466845 KIAA0319Q5VV43 1072 aa7.81□□□□□ -1.16
LRCH3-212ENST00000466845 ANKRD34AQ69YU3 496 aa7.81□□□□□ -1.16
LRCH3-212ENST00000466845 TXNDC11Q6PKC3 985 aa7.81□□□□□ -1.16
LRCH3-212ENST00000466845 RBCK1Q9BYM8 510 aa7.81□□□□□ -1.16
LRCH3-212ENST00000466845 RNF208Q9H0X6 261 aa7.81□□□□□ -1.16
LRCH3-212ENST00000466845 ZFYVE1Q9HBF4 777 aa7.81□□□□□ -1.16
LRCH3-212ENST00000466845 DHX15O43143 795 aaKnown RBP7.8□□□□□ -1.16
LRCH3-212ENST00000466845 CPNE3O75131 537 aaKnown RBP7.8□□□□□ -1.16
LRCH3-212ENST00000466845 CDC25BP30305 580 aa7.8□□□□□ -1.16
LRCH3-212ENST00000466845 PEAR1Q5VY43 1037 aaPredicted RBP7.8□□□□□ -1.16
LRCH3-212ENST00000466845 ERICH6BQ5W0A0 696 aa7.8□□□□□ -1.16
LRCH3-212ENST00000466845 ADAMTSL4Q6UY14 1074 aa7.8□□□□□ -1.16
LRCH3-212ENST00000466845 CNPY4Q8N129 248 aa7.8□□□□□ -1.16
LRCH3-212ENST00000466845 DDX54Q8TDD1 881 aaKnown RBP7.8□□□□□ -1.16
LRCH3-212ENST00000466845 CARD10Q9BWT7 1032 aa7.8□□□□□ -1.16
LRCH3-212ENST00000466845 GZF1Q9H116 711 aaPredicted RBP7.8□□□□□ -1.16
LRCH3-212ENST00000466845 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.8□□□□□ -1.16
LRCH3-212ENST00000466845 MAFGO15525 162 aa7.79□□□□□ -1.16
LRCH3-212ENST00000466845 ACPPP15309 386 aa7.79□□□□□ -1.16
LRCH3-212ENST00000466845 HP1BP3Q5SSJ5 553 aaPredicted RBP7.79□□□□□ -1.16
LRCH3-212ENST00000466845 KIAA1211Q6ZU35 1233 aa7.79□□□□□ -1.16
LRCH3-212ENST00000466845 VN1R5Q7Z5H4 357 aa7.79□□□□□ -1.16
LRCH3-212ENST00000466845 CCNJLQ8IV13 435 aa7.79□□□□□ -1.16
LRCH3-212ENST00000466845 ALKBH8Q96BT7 664 aaKnown RBP7.79□□□□□ -1.16
LRCH3-212ENST00000466845 KCNK4Q9NYG8 393 aa7.79□□□□□ -1.16
LRCH3-212ENST00000466845 HIF3AQ9Y2N7 669 aa7.79□□□□□ -1.16
LRCH3-212ENST00000466845 RAXQ9Y2V3 346 aa7.79□□□□□ -1.16
LRCH3-212ENST00000466845 SOWAHDA6NJG2 315 aa7.78□□□□□ -1.16
LRCH3-212ENST00000466845 PATL2C9JE40 543 aaKnown RBP7.78□□□□□ -1.16
LRCH3-212ENST00000466845 SOX1O00570 391 aaPredicted RBP7.78□□□□□ -1.16
LRCH3-212ENST00000466845 TRPA1O75762 1119 aa7.78□□□□□ -1.16
LRCH3-212ENST00000466845 PTPN12Q05209 780 aaKnown RBP7.78□□□□□ -1.16
LRCH3-212ENST00000466845 AGGF1Q8N302 714 aaeCLIP7.78□□□□□ -1.16
LRCH3-212ENST00000466845 Q8N3U1 123 aa7.78□□□□□ -1.16
LRCH3-212ENST00000466845 TMC1Q8TDI8 760 aa7.78□□□□□ -1.16
LRCH3-212ENST00000466845 ASAP3Q8TDY4 903 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms