RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 PRPF40BQ6NWY9 871 aaKnown RBP18.3■□□□□ 0.52
SNED1-208ENST00000466618 ERC1Q8IUD2 1116 aa18.3■□□□□ 0.52
SNED1-208ENST00000466618 VGLL2Q8N8G2 317 aa18.3■□□□□ 0.52
SNED1-208ENST00000466618 NLGN2Q8NFZ4 835 aa18.3■□□□□ 0.52
SNED1-208ENST00000466618 RHPN1Q8TCX5 695 aa18.3■□□□□ 0.52
SNED1-208ENST00000466618 C7orf43Q8WVR3 580 aa18.3■□□□□ 0.52
SNED1-208ENST00000466618 TMEM51Q9NW97 253 aa18.3■□□□□ 0.52
SNED1-208ENST00000466618 MROH5Q6ZUA9 1318 aa18.29■□□□□ 0.52
SNED1-208ENST00000466618 PPEF1O14829 653 aaPredicted RBP18.29■□□□□ 0.52
SNED1-208ENST00000466618 SYAP1Q96A49 352 aaPredicted RBP18.29■□□□□ 0.52
SNED1-208ENST00000466618 KIF1BPQ96EK5 621 aa18.29■□□□□ 0.52
SNED1-208ENST00000466618 DLEC1Q9Y238 1755 aa18.29■□□□□ 0.52
SNED1-208ENST00000466618 TAF1P21675 1872 aa18.28■□□□□ 0.52
SNED1-208ENST00000466618 C16orf71Q8IYS4 520 aaPredicted RBP18.28■□□□□ 0.52
SNED1-208ENST00000466618 KLHL34Q8N239 644 aa18.28■□□□□ 0.52
SNED1-208ENST00000466618 TTLL6Q8N841 843 aa18.28■□□□□ 0.52
SNED1-208ENST00000466618 ATP6V0A2Q9Y487 856 aa18.28■□□□□ 0.52
SNED1-208ENST00000466618 GOLGB1Q14789 3259 aaKnown RBP18.28■□□□□ 0.52
SNED1-208ENST00000466618 ADCY5O95622 1261 aa18.28■□□□□ 0.52
SNED1-208ENST00000466618 CHRNDQ07001 517 aa18.28■□□□□ 0.52
SNED1-208ENST00000466618 TFCP2Q12800 502 aa18.28■□□□□ 0.52
SNED1-208ENST00000466618 OS9Q13438 667 aaPredicted RBP18.28■□□□□ 0.52
SNED1-208ENST00000466618 SP8Q8IXZ3 490 aa18.28■□□□□ 0.52
SNED1-208ENST00000466618 FAM184AQ8NB25 1140 aa18.28■□□□□ 0.52
SNED1-208ENST00000466618 LRRCC1Q9C099 1032 aa18.28■□□□□ 0.52
SNED1-208ENST00000466618 PIM2Q9P1W9 311 aa18.28■□□□□ 0.52
SNED1-208ENST00000466618 SYT17Q9BSW7 474 aa18.27■□□□□ 0.52
SNED1-208ENST00000466618 GADD45BO75293 160 aaPredicted RBP18.27■□□□□ 0.51
SNED1-208ENST00000466618 PDE8BO95263 885 aa18.27■□□□□ 0.51
SNED1-208ENST00000466618 OTUD7AQ8TE49 926 aaPredicted RBP18.27■□□□□ 0.51
SNED1-208ENST00000466618 APBB1O00213 710 aa18.26■□□□□ 0.51
SNED1-208ENST00000466618 RIOK3O14730 519 aaKnown RBP18.26■□□□□ 0.51
SNED1-208ENST00000466618 IGSF3O75054 1194 aa18.26■□□□□ 0.51
SNED1-208ENST00000466618 SDSP20132 328 aa18.26■□□□□ 0.51
SNED1-208ENST00000466618 METTL24Q5JXM2 366 aa18.26■□□□□ 0.51
SNED1-208ENST00000466618 TMX3Q96JJ7 454 aa18.26■□□□□ 0.51
SNED1-208ENST00000466618 CEP126Q9P2H0 1117 aa18.26■□□□□ 0.51
SNED1-208ENST00000466618 CTIFO43310 598 aaKnown RBP18.25■□□□□ 0.51
SNED1-208ENST00000466618 GPR108Q9NPR9 543 aa18.25■□□□□ 0.51
SNED1-208ENST00000466618 SMARCA5O60264 1052 aaPredicted RBP18.25■□□□□ 0.51
SNED1-208ENST00000466618 HELBQ8NG08 1087 aaPredicted RBP18.25■□□□□ 0.51
SNED1-208ENST00000466618 SNED1Q8TER0 1413 aa18.25■□□□□ 0.51
SNED1-208ENST00000466618 FGFR2P21802 821 aa18.24■□□□□ 0.51
SNED1-208ENST00000466618 TAF3Q5VWG9 929 aa18.24■□□□□ 0.51
SNED1-208ENST00000466618 OLFM4Q6UX06 510 aa18.24■□□□□ 0.51
SNED1-208ENST00000466618 ANKRD2Q9GZV1 360 aa18.24■□□□□ 0.51
SNED1-208ENST00000466618 IL1RAPL2Q9NP60 686 aa18.24■□□□□ 0.51
SNED1-208ENST00000466618 LRRC37AA6NMS7 1700 aa18.24■□□□□ 0.51
SNED1-208ENST00000466618 TAF5LO75529 589 aa18.24■□□□□ 0.51
SNED1-208ENST00000466618 GPSM2P81274 684 aa18.24■□□□□ 0.51
SNED1-208ENST00000466618 CUL4AQ13619 759 aa18.24■□□□□ 0.51
SNED1-208ENST00000466618 DALRD3Q5D0E6 543 aaKnown RBP18.24■□□□□ 0.51
SNED1-208ENST00000466618 KIAA1524Q8TCG1 905 aa18.24■□□□□ 0.51
SNED1-208ENST00000466618 SLX4Q8IY92 1834 aa18.23■□□□□ 0.51
SNED1-208ENST00000466618 TNNI3KQ59H18 835 aa18.23■□□□□ 0.51
SNED1-208ENST00000466618 EAF2Q96CJ1 260 aaPredicted RBP18.23■□□□□ 0.51
SNED1-208ENST00000466618 FPGT-TNNI3KV9GXZ4 949 aa18.23■□□□□ 0.51
SNED1-208ENST00000466618 XDHP47989 1333 aa18.23■□□□□ 0.51
SNED1-208ENST00000466618 WTIPA6NIX2 430 aaPredicted RBP18.23■□□□□ 0.51
SNED1-208ENST00000466618 KCNF1Q9H3M0 494 aa18.23■□□□□ 0.51
SNED1-208ENST00000466618 GDPD2Q9HCC8 539 aa18.23■□□□□ 0.51
SNED1-208ENST00000466618 SNAP23O00161 211 aa18.22■□□□□ 0.51
SNED1-208ENST00000466618 REC8O95072 547 aa18.22■□□□□ 0.51
SNED1-208ENST00000466618 PUM3Q15397 648 aaKnown RBP18.22■□□□□ 0.51
SNED1-208ENST00000466618 CC2D2BQ6DHV5 1058 aa18.22■□□□□ 0.51
SNED1-208ENST00000466618 CLASRPQ8N2M8 674 aaKnown RBP18.22■□□□□ 0.51
SNED1-208ENST00000466618 FEZ1Q99689 392 aa18.22■□□□□ 0.51
SNED1-208ENST00000466618 DIAPH3Q9NSV4 1193 aa18.22■□□□□ 0.51
SNED1-208ENST00000466618 PYCARDQ9ULZ3 195 aa18.22■□□□□ 0.51
SNED1-208ENST00000466618 AKAP2Q9Y2D5 859 aa18.22■□□□□ 0.51
SNED1-208ENST00000466618 SPEF2Q9C093 1822 aa18.22■□□□□ 0.51
SNED1-208ENST00000466618 C21orf2O43822 256 aa18.21■□□□□ 0.51
SNED1-208ENST00000466618 CASC1Q6TDU7 716 aa18.21■□□□□ 0.51
SNED1-208ENST00000466618 USP48Q86UV5 1035 aa18.21■□□□□ 0.51
SNED1-208ENST00000466618 BRCA1P38398 1863 aaKnown RBP18.21■□□□□ 0.51
SNED1-208ENST00000466618 ZNF609O15014 1411 aa18.21■□□□□ 0.51
SNED1-208ENST00000466618 TIMM10P62072 90 aa18.21■□□□□ 0.51
SNED1-208ENST00000466618 UBE4AQ14139 1066 aa18.21■□□□□ 0.51
SNED1-208ENST00000466618 ANKIB1Q9P2G1 1089 aa18.21■□□□□ 0.51
SNED1-208ENST00000466618 LEMD3Q9Y2U8 911 aa18.21■□□□□ 0.51
SNED1-208ENST00000466618 SALL3Q9BXA9 1300 aa18.2■□□□□ 0.5
SNED1-208ENST00000466618 IRS2Q9Y4H2 1338 aa18.2■□□□□ 0.5
SNED1-208ENST00000466618 LTBP1Q14766 1721 aa18.2■□□□□ 0.5
SNED1-208ENST00000466618 A0A1B0GUL7 405 aa18.2■□□□□ 0.5
SNED1-208ENST00000466618 NEK4P51957 841 aa18.2■□□□□ 0.5
SNED1-208ENST00000466618 LPIN2Q92539 896 aa18.2■□□□□ 0.5
SNED1-208ENST00000466618 CGNQ9P2M7 1197 aaKnown RBP18.2■□□□□ 0.5
SNED1-208ENST00000466618 ERC2O15083 957 aa18.2■□□□□ 0.5
SNED1-208ENST00000466618 KDM4AO75164 1064 aa18.2■□□□□ 0.5
SNED1-208ENST00000466618 OGFRQ9NZT2 677 aa18.2■□□□□ 0.5
SNED1-208ENST00000466618 POLLQ9UGP5 575 aa18.2■□□□□ 0.5
SNED1-208ENST00000466618 ZNF804BA4D1E1 1349 aa18.19■□□□□ 0.5
SNED1-208ENST00000466618 ATP2B4P23634 1241 aa18.19■□□□□ 0.5
SNED1-208ENST00000466618 GRIPAP1Q4V328 841 aa18.19■□□□□ 0.5
SNED1-208ENST00000466618 CCDC183Q5T5S1 534 aa18.19■□□□□ 0.5
SNED1-208ENST00000466618 AACSQ86V21 672 aa18.19■□□□□ 0.5
SNED1-208ENST00000466618 TBC1D16Q8TBP0 767 aa18.19■□□□□ 0.5
SNED1-208ENST00000466618 RTFDC1Q9BY42 306 aaPredicted RBP18.19■□□□□ 0.5
SNED1-208ENST00000466618 ZNF219Q9P2Y4 722 aaPredicted RBP18.19■□□□□ 0.5
SNED1-208ENST00000466618 WWC3Q9ULE0 1092 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms