RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 GSPT1P15170 499 aaKnown RBP13.61□□□□□ -0.23
VCP-204ENST00000466100 RGS3P49796 1198 aa13.61□□□□□ -0.23
VCP-204ENST00000466100 GPR162Q16538 588 aa13.61□□□□□ -0.23
VCP-204ENST00000466100 DOK7Q18PE1 504 aa13.61□□□□□ -0.23
VCP-204ENST00000466100 TTC22Q5TAA0 569 aa13.61□□□□□ -0.23
VCP-204ENST00000466100 VPS37DQ86XT2 251 aa13.61□□□□□ -0.23
VCP-204ENST00000466100 DBNDD1Q9H9R9 158 aa13.61□□□□□ -0.23
VCP-204ENST00000466100 IQSEC3Q9UPP2 1182 aaPredicted RBP13.61□□□□□ -0.23
VCP-204ENST00000466100 FAM205AQ6ZU69 1335 aa13.61□□□□□ -0.23
VCP-204ENST00000466100 ERC2O15083 957 aa13.6□□□□□ -0.23
VCP-204ENST00000466100 PODNQ7Z5L7 613 aa13.6□□□□□ -0.23
VCP-204ENST00000466100 LARGE2Q8N3Y3 721 aa13.6□□□□□ -0.23
VCP-204ENST00000466100 BOLA2Q9H3K6 86 aa13.6□□□□□ -0.23
VCP-204ENST00000466100 GNL3LQ9NVN8 582 aaKnown RBP13.6□□□□□ -0.23
VCP-204ENST00000466100 NDUFB9Q9Y6M9 179 aa13.6□□□□□ -0.23
VCP-204ENST00000466100 ADAMTSL1Q8N6G6 1762 aa13.59□□□□□ -0.23
VCP-204ENST00000466100 GRIN3BO60391 1043 aa13.59□□□□□ -0.23
VCP-204ENST00000466100 LMNB1P20700 586 aa13.59□□□□□ -0.23
VCP-204ENST00000466100 ZAP70P43403 619 aa13.59□□□□□ -0.23
VCP-204ENST00000466100 SPATA5Q8NB90 893 aa13.59□□□□□ -0.23
VCP-204ENST00000466100 EDC3Q96F86 508 aaKnown RBP13.59□□□□□ -0.23
VCP-204ENST00000466100 SNRKQ9NRH2 765 aa13.59□□□□□ -0.23
VCP-204ENST00000466100 DENND2AQ9ULE3 1009 aa13.59□□□□□ -0.23
VCP-204ENST00000466100 SALL1Q9NSC2 1324 aa13.59□□□□□ -0.23
VCP-204ENST00000466100 MYH2Q9UKX2 1941 aa13.58□□□□□ -0.23
VCP-204ENST00000466100 CYP2E1P05181 493 aaPredicted RBP13.58□□□□□ -0.24
VCP-204ENST00000466100 NIM1KQ8IY84 436 aa13.58□□□□□ -0.24
VCP-204ENST00000466100 KCNQ5Q9NR82 932 aa13.58□□□□□ -0.24
VCP-204ENST00000466100 ZNRF3Q9ULT6 936 aa13.58□□□□□ -0.24
VCP-204ENST00000466100 FZD9O00144 591 aa13.57□□□□□ -0.24
VCP-204ENST00000466100 BMP2KLQ5H9B9 411 aa13.57□□□□□ -0.24
VCP-204ENST00000466100 DNAJC2Q99543 621 aaKnown RBP13.57□□□□□ -0.24
VCP-204ENST00000466100 ANTXR1Q9H6X2 564 aa13.57□□□□□ -0.24
VCP-204ENST00000466100 PAG1Q9NWQ8 432 aa13.57□□□□□ -0.24
VCP-204ENST00000466100 MAP4K4O95819 1239 aaPredicted RBP13.56□□□□□ -0.24
VCP-204ENST00000466100 GTF2IP78347 998 aa13.56□□□□□ -0.24
VCP-204ENST00000466100 CHAF1AQ13111 956 aaPredicted RBP13.56□□□□□ -0.24
VCP-204ENST00000466100 DACT2Q5SW24 774 aa13.56□□□□□ -0.24
VCP-204ENST00000466100 STRIP1Q5VSL9 837 aa13.56□□□□□ -0.24
VCP-204ENST00000466100 CERS5Q8N5B7 392 aa13.56□□□□□ -0.24
VCP-204ENST00000466100 PIH1D3Q9NQM4 214 aaKnown RBP13.56□□□□□ -0.24
VCP-204ENST00000466100 JAG2Q9Y219 1238 aa13.56□□□□□ -0.24
VCP-204ENST00000466100 RFX7Q2KHR2 1363 aa13.56□□□□□ -0.24
VCP-204ENST00000466100 CDK5RAP2Q96SN8 1893 aa13.55□□□□□ -0.24
VCP-204ENST00000466100 USP17L3A6NCW0 530 aa13.55□□□□□ -0.24
VCP-204ENST00000466100 USP17L4A6NCW7 530 aa13.55□□□□□ -0.24
VCP-204ENST00000466100 G3V3G9 751 aa13.55□□□□□ -0.24
VCP-204ENST00000466100 GOLIM4O00461 696 aa13.55□□□□□ -0.24
VCP-204ENST00000466100 FRAT2O75474 233 aaPredicted RBP13.55□□□□□ -0.24
VCP-204ENST00000466100 SDSP20132 328 aa13.55□□□□□ -0.24
VCP-204ENST00000466100 FKBP1AP62942 108 aaKnown RBP13.55□□□□□ -0.24
VCP-204ENST00000466100 CXCL9Q07325 125 aa13.55□□□□□ -0.24
VCP-204ENST00000466100 GRIK5Q16478 980 aa13.55□□□□□ -0.24
VCP-204ENST00000466100 DCAF8Q5TAQ9 597 aa13.55□□□□□ -0.24
VCP-204ENST00000466100 C9orf131Q5VYM1 1079 aa13.55□□□□□ -0.24
VCP-204ENST00000466100 TTLL5Q6EMB2 1281 aa13.55□□□□□ -0.24
VCP-204ENST00000466100 TBC1D9Q6ZT07 1266 aa13.55□□□□□ -0.24
VCP-204ENST00000466100 USP17L1Q7RTZ2 530 aa13.55□□□□□ -0.24
VCP-204ENST00000466100 WDR66Q8TBY9 1149 aa13.55□□□□□ -0.24
VCP-204ENST00000466100 JDP2Q8WYK2 163 aa13.55□□□□□ -0.24
VCP-204ENST00000466100 RNF181Q9P0P0 153 aa13.55□□□□□ -0.24
VCP-204ENST00000466100 ZNF541Q9H0D2 1346 aa13.55□□□□□ -0.24
VCP-204ENST00000466100 PSMD14O00487 310 aa13.54□□□□□ -0.24
VCP-204ENST00000466100 RAD17O75943 681 aa13.54□□□□□ -0.24
VCP-204ENST00000466100 VIL1P09327 827 aaKnown RBP13.54□□□□□ -0.24
VCP-204ENST00000466100 KBTBD3Q8NAB2 608 aa13.54□□□□□ -0.24
VCP-204ENST00000466100 ZNF384Q8TF68 577 aa13.54□□□□□ -0.24
VCP-204ENST00000466100 TBC1D22AQ8WUA7 517 aa13.54□□□□□ -0.24
VCP-204ENST00000466100 EVI5LQ96CN4 794 aa13.54□□□□□ -0.24
VCP-204ENST00000466100 GMLQ99445 158 aa13.54□□□□□ -0.24
VCP-204ENST00000466100 MXD3Q9BW11 206 aa13.54□□□□□ -0.24
VCP-204ENST00000466100 ECM29Q5VYK3 1845 aa13.54□□□□□ -0.24
VCP-204ENST00000466100 ZC3H4Q9UPT8 1303 aaKnown RBP13.54□□□□□ -0.24
VCP-204ENST00000466100 PRDX5P30044 214 aa13.53□□□□□ -0.24
VCP-204ENST00000466100 TTF1Q15361 905 aaPredicted RBP13.53□□□□□ -0.24
VCP-204ENST00000466100 MFSD14BQ5SR56 506 aa13.53□□□□□ -0.24
VCP-204ENST00000466100 CNTROBQ8N137 903 aa13.53□□□□□ -0.24
VCP-204ENST00000466100 FOCADQ5VW36 1801 aa13.53□□□□□ -0.24
VCP-204ENST00000466100 TRIM6-TRIM34B2RNG4 842 aa13.52□□□□□ -0.25
VCP-204ENST00000466100 IGSF3O75054 1194 aa13.52□□□□□ -0.25
VCP-204ENST00000466100 CIAPIN1Q6FI81 312 aa13.52□□□□□ -0.25
VCP-204ENST00000466100 RSBN1LQ6PCB5 846 aaPredicted RBP13.52□□□□□ -0.25
VCP-204ENST00000466100 TICAM2Q86XR7 235 aa13.52□□□□□ -0.25
VCP-204ENST00000466100 ZGPATQ8N5A5 531 aaKnown RBP13.52□□□□□ -0.25
VCP-204ENST00000466100 SUGT1Q9Y2Z0 365 aa13.52□□□□□ -0.25
VCP-204ENST00000466100 MYO3BQ8WXR4 1341 aa13.51□□□□□ -0.25
VCP-204ENST00000466100 TCRBV5S4A2TA0A5A2 114 aa13.51□□□□□ -0.25
VCP-204ENST00000466100 CHGBP05060 677 aa13.51□□□□□ -0.25
VCP-204ENST00000466100 FBXW7Q969H0 707 aa13.51□□□□□ -0.25
VCP-204ENST00000466100 RILPL2Q969X0 211 aa13.51□□□□□ -0.25
VCP-204ENST00000466100 NSUN4Q96CB9 384 aaKnown RBP13.51□□□□□ -0.25
VCP-204ENST00000466100 ABCF2Q9UG63 623 aa13.51□□□□□ -0.25
VCP-204ENST00000466100 WDR90Q96KV7 1748 aa13.5□□□□□ -0.25
VCP-204ENST00000466100 IDH1O75874 414 aaKnown RBP13.5□□□□□ -0.25
VCP-204ENST00000466100 LDHBP07195 334 aaKnown RBP13.5□□□□□ -0.25
VCP-204ENST00000466100 PDE6AP16499 860 aa13.5□□□□□ -0.25
VCP-204ENST00000466100 ADD2P35612 726 aa13.5□□□□□ -0.25
VCP-204ENST00000466100 EIF6P56537 245 aaKnown RBP13.5□□□□□ -0.25
VCP-204ENST00000466100 MECOMQ03112 1051 aa13.5□□□□□ -0.25
VCP-204ENST00000466100 TNIP1Q15025 636 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms