RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 IQCA1LA6NCM1 817 aa12.02□□□□□ -0.49
ATG3-203ENST00000465980 RNF223E7ERA6 249 aa12.02□□□□□ -0.49
ATG3-203ENST00000465980 PPIP5K2O43314 1243 aa12.02□□□□□ -0.49
ATG3-203ENST00000465980 DDX46Q7L014 1031 aaKnown RBP12.02□□□□□ -0.49
ATG3-203ENST00000465980 C8orf58Q8NAV2 365 aa12.02□□□□□ -0.49
ATG3-203ENST00000465980 TSR2Q969E8 191 aaKnown RBP12.02□□□□□ -0.49
ATG3-203ENST00000465980 KLRG1Q96E93 195 aa12.02□□□□□ -0.49
ATG3-203ENST00000465980 FAM89AQ96GI7 184 aa12.02□□□□□ -0.49
ATG3-203ENST00000465980 TMX4Q9H1E5 349 aaPredicted RBP12.02□□□□□ -0.49
ATG3-203ENST00000465980 TAF1DQ9H5J8 278 aaPredicted RBP12.02□□□□□ -0.49
ATG3-203ENST00000465980 PHAXQ9H814 394 aaKnown RBP12.02□□□□□ -0.49
ATG3-203ENST00000465980 ATP6V0A2Q9Y487 856 aa12.02□□□□□ -0.49
ATG3-203ENST00000465980 ADAMTSL1Q8N6G6 1762 aa12.02□□□□□ -0.49
ATG3-203ENST00000465980 FZD9O00144 591 aa12.01□□□□□ -0.49
ATG3-203ENST00000465980 EIF6P56537 245 aaKnown RBP12.01□□□□□ -0.49
ATG3-203ENST00000465980 AOC3Q16853 763 aa12.01□□□□□ -0.49
ATG3-203ENST00000465980 RIC3Q7Z5B4 369 aa12.01□□□□□ -0.49
ATG3-203ENST00000465980 ISCA1Q9BUE6 129 aa12.01□□□□□ -0.49
ATG3-203ENST00000465980 HACL1Q9UJ83 578 aa12.01□□□□□ -0.49
ATG3-203ENST00000465980 TRPM7Q96QT4 1865 aa12□□□□□ -0.49
ATG3-203ENST00000465980 EPHX2P34913 555 aa12□□□□□ -0.49
ATG3-203ENST00000465980 GRAPQ13588 217 aa12□□□□□ -0.49
ATG3-203ENST00000465980 DPP8Q6V1X1 898 aaPredicted RBP12□□□□□ -0.49
ATG3-203ENST00000465980 LDHDQ86WU2 507 aa12□□□□□ -0.49
ATG3-203ENST00000465980 NIM1KQ8IY84 436 aa12□□□□□ -0.49
ATG3-203ENST00000465980 GPC2Q8N158 579 aa12□□□□□ -0.49
ATG3-203ENST00000465980 TSPYL6Q8N831 410 aa12□□□□□ -0.49
ATG3-203ENST00000465980 ANKLE1Q8NAG6 615 aa12□□□□□ -0.49
ATG3-203ENST00000465980 GRAPLQ8TC17 118 aaPredicted RBP12□□□□□ -0.49
ATG3-203ENST00000465980 MYD88Q99836 296 aa12□□□□□ -0.49
ATG3-203ENST00000465980 FANCIQ9NVI1 1328 aa12□□□□□ -0.49
ATG3-203ENST00000465980 DUOX1Q9NRD9 1551 aa12□□□□□ -0.49
ATG3-203ENST00000465980 CFHP08603 1231 aa11.99□□□□□ -0.49
ATG3-203ENST00000465980 SLC19A1P41440 591 aa11.99□□□□□ -0.49
ATG3-203ENST00000465980 GRIPAP1Q4V328 841 aa11.99□□□□□ -0.49
ATG3-203ENST00000465980 RCAN3Q9UKA8 241 aa11.99□□□□□ -0.49
ATG3-203ENST00000465980 SUPT16HQ9Y5B9 1047 aaKnown RBP11.99□□□□□ -0.49
ATG3-203ENST00000465980 POLR2AP24928 1970 aaKnown RBP11.99□□□□□ -0.49
ATG3-203ENST00000465980 IRS4O14654 1257 aaPredicted RBP11.98□□□□□ -0.49
ATG3-203ENST00000465980 TLL1O43897 1013 aa11.98□□□□□ -0.49
ATG3-203ENST00000465980 BBOX1O75936 387 aa11.98□□□□□ -0.49
ATG3-203ENST00000465980 CT47B1P0C2W7 299 aaPredicted RBP11.98□□□□□ -0.49
ATG3-203ENST00000465980 CCDC30Q5VVM6 783 aa11.98□□□□□ -0.49
ATG3-203ENST00000465980 MPNDQ8N594 471 aa11.98□□□□□ -0.49
ATG3-203ENST00000465980 JARID2Q92833 1246 aaPredicted RBP11.98□□□□□ -0.49
ATG3-203ENST00000465980 OATP04181 439 aa11.97□□□□□ -0.49
ATG3-203ENST00000465980 LMOD1P29536 600 aaPredicted RBP11.97□□□□□ -0.49
ATG3-203ENST00000465980 MAP1SQ66K74 1059 aaPredicted RBP11.97□□□□□ -0.49
ATG3-203ENST00000465980 SP8Q8IXZ3 490 aa11.97□□□□□ -0.49
ATG3-203ENST00000465980 SUPT20HQ8NEM7 779 aa11.97□□□□□ -0.49
ATG3-203ENST00000465980 CELF1Q92879 486 aaKnown RBP11.97□□□□□ -0.49
ATG3-203ENST00000465980 MKRN1Q9UHC7 482 aaKnown RBP11.97□□□□□ -0.49
ATG3-203ENST00000465980 SCN9AQ15858 1988 aa11.97□□□□□ -0.49
ATG3-203ENST00000465980 EPS15P42566 896 aa11.96□□□□□ -0.49
ATG3-203ENST00000465980 SCNN1DP51172 638 aa11.96□□□□□ -0.49
ATG3-203ENST00000465980 EXOSC9Q06265 439 aaKnown RBP11.96□□□□□ -0.49
ATG3-203ENST00000465980 TRIM28Q13263 835 aaKnown RBP11.96□□□□□ -0.49
ATG3-203ENST00000465980 JMYQ8N9B5 988 aa11.96□□□□□ -0.49
ATG3-203ENST00000465980 CCDC85AQ96PX6 553 aaPredicted RBP11.96□□□□□ -0.49
ATG3-203ENST00000465980 STK31Q9BXU1 1019 aa11.96□□□□□ -0.49
ATG3-203ENST00000465980 RTFDC1Q9BY42 306 aaPredicted RBP11.96□□□□□ -0.49
ATG3-203ENST00000465980 PASKQ96RG2 1323 aa11.95□□□□□ -0.5
ATG3-203ENST00000465980 NR1I2O75469 434 aa11.95□□□□□ -0.5
ATG3-203ENST00000465980 RAD17O75943 681 aa11.95□□□□□ -0.5
ATG3-203ENST00000465980 DDX58O95786 925 aaKnown RBP11.95□□□□□ -0.5
ATG3-203ENST00000465980 ADH1BP00325 375 aa11.95□□□□□ -0.5
ATG3-203ENST00000465980 SLC10A3P09131 477 aa11.95□□□□□ -0.5
ATG3-203ENST00000465980 KIAA2012Q0VF49 1180 aa11.95□□□□□ -0.5
ATG3-203ENST00000465980 SF3B3Q15393 1217 aaKnown RBP11.95□□□□□ -0.5
ATG3-203ENST00000465980 TWISTNBQ3B726 338 aaPredicted RBP11.95□□□□□ -0.5
ATG3-203ENST00000465980 SPRYD7Q5W111 196 aa11.95□□□□□ -0.5
ATG3-203ENST00000465980 PNMA8AQ86V59 439 aaPredicted RBP11.95□□□□□ -0.5
ATG3-203ENST00000465980 ZBTB38Q8NAP3 1195 aaPredicted RBP11.95□□□□□ -0.5
ATG3-203ENST00000465980 PXYLP1Q8TE99 480 aa11.95□□□□□ -0.5
ATG3-203ENST00000465980 EMID1Q96A84 441 aaPredicted RBP11.95□□□□□ -0.5
ATG3-203ENST00000465980 CWC25Q9NXE8 425 aaPredicted RBP11.95□□□□□ -0.5
ATG3-203ENST00000465980 ZNRF3Q9ULT6 936 aa11.95□□□□□ -0.5
ATG3-203ENST00000465980 MAP3K2Q9Y2U5 619 aa11.95□□□□□ -0.5
ATG3-203ENST00000465980 PI4KAP2A4QPH2 592 aa11.94□□□□□ -0.5
ATG3-203ENST00000465980 C6orf229H3BNL8 230 aa11.94□□□□□ -0.5
ATG3-203ENST00000465980 GMPSP49915 693 aaPredicted RBP11.94□□□□□ -0.5
ATG3-203ENST00000465980 PRR20EP86478 221 aa11.94□□□□□ -0.5
ATG3-203ENST00000465980 PRR20CP86479 221 aa11.94□□□□□ -0.5
ATG3-203ENST00000465980 PRR20DP86480 221 aa11.94□□□□□ -0.5
ATG3-203ENST00000465980 PRR20BP86481 221 aa11.94□□□□□ -0.5
ATG3-203ENST00000465980 PRR20AP86496 221 aa11.94□□□□□ -0.5
ATG3-203ENST00000465980 CXCL9Q07325 125 aa11.94□□□□□ -0.5
ATG3-203ENST00000465980 FAM161AQ3B820 660 aa11.94□□□□□ -0.5
ATG3-203ENST00000465980 TRIM67Q6ZTA4 783 aa11.94□□□□□ -0.5
ATG3-203ENST00000465980 TMC4Q7Z404 712 aa11.94□□□□□ -0.5
ATG3-203ENST00000465980 ZNF598Q86UK7 904 aaKnown RBP11.94□□□□□ -0.5
ATG3-203ENST00000465980 CNTROBQ8N137 903 aa11.94□□□□□ -0.5
ATG3-203ENST00000465980 PI4KAP1Q8N8J0 262 aa11.94□□□□□ -0.5
ATG3-203ENST00000465980 CCDC191Q8NCU4 936 aa11.94□□□□□ -0.5
ATG3-203ENST00000465980 GPR101Q96P66 508 aaPredicted RBP11.94□□□□□ -0.5
ATG3-203ENST00000465980 METTL22Q9BUU2 404 aaPredicted RBP11.94□□□□□ -0.5
ATG3-203ENST00000465980 SEC31BQ9NQW1 1179 aa11.94□□□□□ -0.5
ATG3-203ENST00000465980 NSFL1CQ9UNZ2 370 aaKnown RBP11.94□□□□□ -0.5
ATG3-203ENST00000465980 PSME4Q14997 1843 aa11.93□□□□□ -0.5
ATG3-203ENST00000465980 SEMA3EO15041 775 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms