RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 MAP3K11Q16584 847 aa15.11■□□□□ 0.01
CNOT4-208ENST00000465721 CERS5Q8N5B7 392 aa15.11■□□□□ 0.01
CNOT4-208ENST00000465721 ANKRD2Q9GZV1 360 aa15.11■□□□□ 0.01
CNOT4-208ENST00000465721 MANSC4A6NHS7 340 aaPredicted RBP15.1■□□□□ 0.01
CNOT4-208ENST00000465721 ALDH1A1P00352 501 aa15.1■□□□□ 0.01
CNOT4-208ENST00000465721 STK31Q9BXU1 1019 aa15.1■□□□□ 0.01
CNOT4-208ENST00000465721 DEFB129Q9H1M3 183 aa15.1■□□□□ 0.01
CNOT4-208ENST00000465721 ZSWIM8A7E2V4 1837 aa15.09■□□□□ 0.01
CNOT4-208ENST00000465721 IGF2BP3O00425 579 aaKnown RBP eCLIP15.09■□□□□ 0.01
CNOT4-208ENST00000465721 CSF1RP07333 972 aa15.09■□□□□ 0.01
CNOT4-208ENST00000465721 ZBTB48P10074 688 aaPredicted RBP15.09■□□□□ 0.01
CNOT4-208ENST00000465721 CHRNDQ07001 517 aa15.09■□□□□ 0.01
CNOT4-208ENST00000465721 GCKRQ14397 625 aa15.09■□□□□ 0.01
CNOT4-208ENST00000465721 OTOP1Q7RTM1 612 aa15.09■□□□□ 0.01
CNOT4-208ENST00000465721 IFNL1Q8IU54 200 aa15.09■□□□□ 0.01
CNOT4-208ENST00000465721 MTMR14Q8NCE2 650 aa15.09■□□□□ 0.01
CNOT4-208ENST00000465721 CLMNQ96JQ2 1002 aa15.09■□□□□ 0.01
CNOT4-208ENST00000465721 CD209Q9NNX6 404 aa15.09■□□□□ 0.01
CNOT4-208ENST00000465721 PCDHAC2Q9Y5I4 1007 aa15.09■□□□□ 0.01
CNOT4-208ENST00000465721 PPP2R3BQ9Y5P8 575 aa15.09■□□□□ 0.01
CNOT4-208ENST00000465721 SNAP23O00161 211 aa15.08■□□□□ 0
CNOT4-208ENST00000465721 ATXN8OSP0DMR3 200 aa15.08■□□□□ 0
CNOT4-208ENST00000465721 C15orf52Q6ZUT6 534 aaKnown RBP15.08■□□□□ 0
CNOT4-208ENST00000465721 WNK4Q96J92 1243 aa15.08■□□□□ 0
CNOT4-208ENST00000465721 MPHOSPH8Q99549 860 aa15.08■□□□□ 0
CNOT4-208ENST00000465721 TRIOBPQ9H2D6 2365 aa15.08■□□□□ 0
CNOT4-208ENST00000465721 AOX1Q06278 1338 aa15.08■□□□□ 0
CNOT4-208ENST00000465721 KCNJ4P48050 445 aa15.07■□□□□ 0
CNOT4-208ENST00000465721 DLGAP5Q15398 846 aa15.07■□□□□ 0
CNOT4-208ENST00000465721 TWISTNBQ3B726 338 aaPredicted RBP15.07■□□□□ 0
CNOT4-208ENST00000465721 TRIM17Q9Y577 477 aa15.07■□□□□ 0
CNOT4-208ENST00000465721 MYH13Q9UKX3 1938 aa15.06■□□□□ 0
CNOT4-208ENST00000465721 POTEFA5A3E0 1075 aa15.06■□□□□ 0
CNOT4-208ENST00000465721 SPDYE2BA6NHP3 402 aa15.06■□□□□ 0
CNOT4-208ENST00000465721 SPDYE6P0CI01 402 aa15.06■□□□□ 0
CNOT4-208ENST00000465721 GJA5P36382 358 aa15.06■□□□□ 0
CNOT4-208ENST00000465721 INHBEP58166 350 aa15.06■□□□□ 0
CNOT4-208ENST00000465721 FLIIQ13045 1269 aa15.06■□□□□ 0
CNOT4-208ENST00000465721 SLC10A4Q96EP9 437 aa15.06■□□□□ 0
CNOT4-208ENST00000465721 CLRN2A0PK11 232 aa15.05■□□□□ -0
CNOT4-208ENST00000465721 UNCXA6NJT0 531 aa15.05■□□□□ -0
CNOT4-208ENST00000465721 PPP1R12BO60237 982 aaPredicted RBP15.05■□□□□ -0
CNOT4-208ENST00000465721 TAF5LO75529 589 aa15.05■□□□□ -0
CNOT4-208ENST00000465721 IL1R1P14778 569 aa15.05■□□□□ -0
CNOT4-208ENST00000465721 CFAP100Q494V2 611 aa15.05■□□□□ -0
CNOT4-208ENST00000465721 HELBQ8NG08 1087 aaPredicted RBP15.05■□□□□ -0
CNOT4-208ENST00000465721 LINS1Q8NG48 757 aa15.05■□□□□ -0
CNOT4-208ENST00000465721 DNAAF4Q8WXU2 420 aa15.05■□□□□ -0
CNOT4-208ENST00000465721 SZT2Q5T011 3432 aa15.05■□□□□ -0
CNOT4-208ENST00000465721 ANKRD18BA2A2Z9 1011 aa15.04■□□□□ -0
CNOT4-208ENST00000465721 FKBP1AP62942 108 aaKnown RBP15.04■□□□□ -0
CNOT4-208ENST00000465721 CAP1Q01518 475 aa15.04■□□□□ -0
CNOT4-208ENST00000465721 CRHR2Q13324 411 aa15.04■□□□□ -0
CNOT4-208ENST00000465721 CCDC27Q2M243 656 aa15.04■□□□□ -0
CNOT4-208ENST00000465721 NBPF12Q5TAG4 269 aaPredicted RBP15.04■□□□□ -0
CNOT4-208ENST00000465721 CD99L2Q8TCZ2 262 aa15.04■□□□□ -0
CNOT4-208ENST00000465721 GCC1Q96CN9 775 aa15.04■□□□□ -0
CNOT4-208ENST00000465721 PRMT6Q96LA8 375 aaPredicted RBP15.04■□□□□ -0
CNOT4-208ENST00000465721 MYH16Q9H6N6 1097 aa15.04■□□□□ -0
CNOT4-208ENST00000465721 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.04■□□□□ -0
CNOT4-208ENST00000465721 RANBP2P49792 3224 aaKnown RBP15.03■□□□□ -0
CNOT4-208ENST00000465721 F8W031 263 aaPredicted RBP15.03■□□□□ -0
CNOT4-208ENST00000465721 FOXO4P98177 505 aa15.03■□□□□ -0
CNOT4-208ENST00000465721 FKBP5Q13451 457 aaPredicted RBP15.03■□□□□ -0
CNOT4-208ENST00000465721 INTS3Q68E01 1043 aaKnown RBP15.03■□□□□ -0
CNOT4-208ENST00000465721 ZNF804AQ7Z570 1209 aa15.03■□□□□ -0
CNOT4-208ENST00000465721 ARMC5Q96C12 935 aa15.03■□□□□ -0
CNOT4-208ENST00000465721 ERO1AQ96HE7 468 aa15.03■□□□□ -0
CNOT4-208ENST00000465721 RNF39Q9H2S5 420 aa15.03■□□□□ -0
CNOT4-208ENST00000465721 VEZTQ9HBM0 779 aa15.03■□□□□ -0
CNOT4-208ENST00000465721 PTPN22Q9Y2R2 807 aa15.03■□□□□ -0
CNOT4-208ENST00000465721 TESPA1A2RU30 521 aaPredicted RBP15.02■□□□□ -0
CNOT4-208ENST00000465721 MYO1BO43795 1136 aa15.02■□□□□ -0
CNOT4-208ENST00000465721 USP2O75604 605 aaPredicted RBP15.02■□□□□ -0
CNOT4-208ENST00000465721 IREB2P48200 963 aaKnown RBP15.02■□□□□ -0
CNOT4-208ENST00000465721 SUPT20HL1Q3ZLR7 823 aa15.02■□□□□ -0
CNOT4-208ENST00000465721 WWC1Q8IX03 1113 aa15.02■□□□□ -0
CNOT4-208ENST00000465721 PTPN18Q99952 460 aa15.02■□□□□ -0
CNOT4-208ENST00000465721 JAG2Q9Y219 1238 aa15.02■□□□□ -0
CNOT4-208ENST00000465721 IL16Q14005 1332 aa15.01□□□□□ -0.01
CNOT4-208ENST00000465721 FAM205AQ6ZU69 1335 aa15.01□□□□□ -0.01
CNOT4-208ENST00000465721 FANCIQ9NVI1 1328 aa15.01□□□□□ -0.01
CNOT4-208ENST00000465721 IFIT5Q13325 482 aaKnown RBP15.01□□□□□ -0.01
CNOT4-208ENST00000465721 RASA3Q14644 834 aa15.01□□□□□ -0.01
CNOT4-208ENST00000465721 HABP4Q5JVS0 413 aaKnown RBP15.01□□□□□ -0.01
CNOT4-208ENST00000465721 ANKRD13AQ8IZ07 590 aa15.01□□□□□ -0.01
CNOT4-208ENST00000465721 SPDYE2Q495Y8 402 aa15□□□□□ -0.01
CNOT4-208ENST00000465721 CDAN1Q8IWY9 1227 aa15□□□□□ -0.01
CNOT4-208ENST00000465721 EFCC1Q9HA90 598 aa15□□□□□ -0.01
CNOT4-208ENST00000465721 SP3Q02447 781 aa14.99□□□□□ -0.01
CNOT4-208ENST00000465721 CCDC184Q52MB2 194 aa14.99□□□□□ -0.01
CNOT4-208ENST00000465721 EPHA10Q5JZY3 1008 aa14.99□□□□□ -0.01
CNOT4-208ENST00000465721 OPTNQ96CV9 577 aa14.99□□□□□ -0.01
CNOT4-208ENST00000465721 TEPSINQ96N21 525 aa14.99□□□□□ -0.01
CNOT4-208ENST00000465721 CHMP3Q9Y3E7 222 aa14.99□□□□□ -0.01
CNOT4-208ENST00000465721 AK9Q5TCS8 1911 aa14.98□□□□□ -0.01
CNOT4-208ENST00000465721 BEND3Q5T5X7 828 aa14.98□□□□□ -0.01
CNOT4-208ENST00000465721 OTUD7BQ6GQQ9 843 aa14.98□□□□□ -0.01
CNOT4-208ENST00000465721 LMBR1LQ6UX01 489 aa14.98□□□□□ -0.01
CNOT4-208ENST00000465721 ZNF594Q96JF6 807 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms