RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 MICALL2Q8IY33 904 aa16.88■□□□□ 0.29
LIMD1-203ENST00000465039 OGFOD1Q8N543 542 aa16.88■□□□□ 0.29
LIMD1-203ENST00000465039 SMC1BQ8NDV3 1235 aa16.88■□□□□ 0.29
LIMD1-203ENST00000465039 ZNF512BQ96KM6 892 aaPredicted RBP16.88■□□□□ 0.29
LIMD1-203ENST00000465039 KCNQ5Q9NR82 932 aa16.88■□□□□ 0.29
LIMD1-203ENST00000465039 CNOT7Q9UIV1 285 aaKnown RBP16.88■□□□□ 0.29
LIMD1-203ENST00000465039 FPGT-TNNI3KV9GXZ4 949 aa16.88■□□□□ 0.29
LIMD1-203ENST00000465039 BCAMP50895 628 aa16.87■□□□□ 0.29
LIMD1-203ENST00000465039 HDAC1Q13547 482 aaPredicted RBP16.87■□□□□ 0.29
LIMD1-203ENST00000465039 CCDC102BQ68D86 513 aa16.87■□□□□ 0.29
LIMD1-203ENST00000465039 WDR66Q8TBY9 1149 aa16.87■□□□□ 0.29
LIMD1-203ENST00000465039 XAGE2Q96GT9 111 aa16.87■□□□□ 0.29
LIMD1-203ENST00000465039 DENND2AQ9ULE3 1009 aa16.87■□□□□ 0.29
LIMD1-203ENST00000465039 SALL1Q9NSC2 1324 aa16.87■□□□□ 0.29
LIMD1-203ENST00000465039 EPS15P42566 896 aa16.86■□□□□ 0.29
LIMD1-203ENST00000465039 RHPN1Q8TCX5 695 aa16.86■□□□□ 0.29
LIMD1-203ENST00000465039 DCTPP1Q9H773 170 aa16.86■□□□□ 0.29
LIMD1-203ENST00000465039 HDAC9Q9UKV0 1011 aa16.86■□□□□ 0.29
LIMD1-203ENST00000465039 EXOC6BQ9Y2D4 811 aa16.86■□□□□ 0.29
LIMD1-203ENST00000465039 ZBTB12Q9Y330 459 aaPredicted RBP16.86■□□□□ 0.29
LIMD1-203ENST00000465039 MAST3O60307 1309 aa16.86■□□□□ 0.29
LIMD1-203ENST00000465039 FRAT2O75474 233 aaPredicted RBP16.85■□□□□ 0.29
LIMD1-203ENST00000465039 UQCRFS1P1P0C7P4 283 aa16.85■□□□□ 0.29
LIMD1-203ENST00000465039 ARID4AP29374 1257 aaPredicted RBP16.85■□□□□ 0.29
LIMD1-203ENST00000465039 MFSD14BQ5SR56 506 aa16.85■□□□□ 0.29
LIMD1-203ENST00000465039 CLASRPQ8N2M8 674 aaKnown RBP16.85■□□□□ 0.29
LIMD1-203ENST00000465039 ZGPATQ8N5A5 531 aaKnown RBP16.85■□□□□ 0.29
LIMD1-203ENST00000465039 PGAP2Q9UHJ9 254 aa16.85■□□□□ 0.29
LIMD1-203ENST00000465039 PCDHB15Q9Y5E8 787 aa16.85■□□□□ 0.29
LIMD1-203ENST00000465039 TIMM10P62072 90 aa16.84■□□□□ 0.29
LIMD1-203ENST00000465039 HDLBPQ00341 1268 aaKnown RBP16.84■□□□□ 0.29
LIMD1-203ENST00000465039 GORABQ5T7V8 394 aa16.84■□□□□ 0.29
LIMD1-203ENST00000465039 CHADLQ6NUI6 762 aa16.84■□□□□ 0.29
LIMD1-203ENST00000465039 MTMR14Q8NCE2 650 aa16.84■□□□□ 0.29
LIMD1-203ENST00000465039 MRIQ9BWK5 157 aa16.84■□□□□ 0.29
LIMD1-203ENST00000465039 COL1A1P02452 1464 aaPredicted RBP16.83■□□□□ 0.28
LIMD1-203ENST00000465039 ADORA1P30542 326 aa16.83■□□□□ 0.28
LIMD1-203ENST00000465039 PHKA1P46020 1223 aa16.83■□□□□ 0.28
LIMD1-203ENST00000465039 CCDC158Q5M9N0 1113 aa16.83■□□□□ 0.28
LIMD1-203ENST00000465039 CERS5Q8N5B7 392 aa16.83■□□□□ 0.28
LIMD1-203ENST00000465039 NEUROD6Q96NK8 337 aa16.83■□□□□ 0.28
LIMD1-203ENST00000465039 LRRCC1Q9C099 1032 aa16.83■□□□□ 0.28
LIMD1-203ENST00000465039 PITPNM2Q9BZ72 1349 aa16.82■□□□□ 0.28
LIMD1-203ENST00000465039 RASGRF1Q13972 1273 aa16.82■□□□□ 0.28
LIMD1-203ENST00000465039 KIF4BQ2VIQ3 1234 aa16.82■□□□□ 0.28
LIMD1-203ENST00000465039 TMED8Q6PL24 325 aaPredicted RBP16.82■□□□□ 0.28
LIMD1-203ENST00000465039 FBXW7Q969H0 707 aa16.82■□□□□ 0.28
LIMD1-203ENST00000465039 EAF2Q96CJ1 260 aaPredicted RBP16.82■□□□□ 0.28
LIMD1-203ENST00000465039 GCC1Q96CN9 775 aa16.82■□□□□ 0.28
LIMD1-203ENST00000465039 MYOZ2Q9NPC6 264 aa16.82■□□□□ 0.28
LIMD1-203ENST00000465039 DBNLQ9UJU6 430 aaKnown RBP16.82■□□□□ 0.28
LIMD1-203ENST00000465039 SERPINA10Q9UK55 444 aa16.82■□□□□ 0.28
LIMD1-203ENST00000465039 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.82■□□□□ 0.28
LIMD1-203ENST00000465039 C1QTNF8P60827 252 aa16.81■□□□□ 0.28
LIMD1-203ENST00000465039 CENPBP07199 599 aaPredicted RBP16.8■□□□□ 0.28
LIMD1-203ENST00000465039 EAPPQ56P03 285 aaPredicted RBP16.8■□□□□ 0.28
LIMD1-203ENST00000465039 SPTY2D1Q68D10 685 aaPredicted RBP16.8■□□□□ 0.28
LIMD1-203ENST00000465039 AACSQ86V21 672 aa16.8■□□□□ 0.28
LIMD1-203ENST00000465039 KIAA0825Q8IV33 1275 aa16.8■□□□□ 0.28
LIMD1-203ENST00000465039 TRPM4Q8TD43 1214 aa16.8■□□□□ 0.28
LIMD1-203ENST00000465039 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.8■□□□□ 0.28
LIMD1-203ENST00000465039 ZBED3Q96IU2 234 aaPredicted RBP16.8■□□□□ 0.28
LIMD1-203ENST00000465039 DBNDD2Q9BQY9 259 aa16.8■□□□□ 0.28
LIMD1-203ENST00000465039 ECM29Q5VYK3 1845 aa16.8■□□□□ 0.28
LIMD1-203ENST00000465039 SPATA5Q8NB90 893 aa16.79■□□□□ 0.28
LIMD1-203ENST00000465039 EXOC6Q8TAG9 804 aa16.79■□□□□ 0.28
LIMD1-203ENST00000465039 RWDD1Q9H446 243 aaPredicted RBP16.79■□□□□ 0.28
LIMD1-203ENST00000465039 IQSEC3Q9UPP2 1182 aaPredicted RBP16.79■□□□□ 0.28
LIMD1-203ENST00000465039 AKAP11Q9UKA4 1901 aa16.78■□□□□ 0.28
LIMD1-203ENST00000465039 IFIT2P09913 472 aaKnown RBP16.78■□□□□ 0.28
LIMD1-203ENST00000465039 HIRAP54198 1017 aaPredicted RBP16.78■□□□□ 0.28
LIMD1-203ENST00000465039 CHAF1AQ13111 956 aaPredicted RBP16.78■□□□□ 0.28
LIMD1-203ENST00000465039 TBC1D10BQ4KMP7 808 aaPredicted RBP16.78■□□□□ 0.28
LIMD1-203ENST00000465039 TTC39AQ5SRH9 613 aa16.78■□□□□ 0.28
LIMD1-203ENST00000465039 HHIPL2Q6UWX4 724 aa16.78■□□□□ 0.28
LIMD1-203ENST00000465039 SAMD7Q7Z3H4 446 aa16.78■□□□□ 0.28
LIMD1-203ENST00000465039 MXD3Q9BW11 206 aa16.78■□□□□ 0.28
LIMD1-203ENST00000465039 IL1RAPL2Q9NP60 686 aa16.78■□□□□ 0.28
LIMD1-203ENST00000465039 HMG20BQ9P0W2 317 aa16.78■□□□□ 0.28
LIMD1-203ENST00000465039 TTF2Q9UNY4 1162 aaKnown RBP16.78■□□□□ 0.28
LIMD1-203ENST00000465039 SHTN1A0MZ66 631 aa16.77■□□□□ 0.28
LIMD1-203ENST00000465039 SPDYE2BA6NHP3 402 aa16.77■□□□□ 0.28
LIMD1-203ENST00000465039 LDHBP07195 334 aaKnown RBP16.77■□□□□ 0.28
LIMD1-203ENST00000465039 SPDYE6P0CI01 402 aa16.77■□□□□ 0.28
LIMD1-203ENST00000465039 DLGAP5Q15398 846 aa16.77■□□□□ 0.28
LIMD1-203ENST00000465039 SLF2Q8IX21 1173 aa16.77■□□□□ 0.28
LIMD1-203ENST00000465039 TEKT1Q969V4 418 aa16.77■□□□□ 0.28
LIMD1-203ENST00000465039 MAST2Q6P0Q8 1798 aa16.77■□□□□ 0.27
LIMD1-203ENST00000465039 PASKQ96RG2 1323 aa16.76■□□□□ 0.27
LIMD1-203ENST00000465039 WNT10BO00744 389 aa16.76■□□□□ 0.27
LIMD1-203ENST00000465039 MYO1BO43795 1136 aa16.76■□□□□ 0.27
LIMD1-203ENST00000465039 EGFRP00533 1210 aa16.76■□□□□ 0.27
LIMD1-203ENST00000465039 POTEIP0CG38 1075 aa16.76■□□□□ 0.27
LIMD1-203ENST00000465039 POTEJP0CG39 1038 aa16.76■□□□□ 0.27
LIMD1-203ENST00000465039 MCAMP43121 646 aa16.76■□□□□ 0.27
LIMD1-203ENST00000465039 CDC37L1Q7L3B6 337 aa16.76■□□□□ 0.27
LIMD1-203ENST00000465039 SMC5Q8IY18 1101 aa16.76■□□□□ 0.27
LIMD1-203ENST00000465039 CNTROBQ8N137 903 aa16.76■□□□□ 0.27
LIMD1-203ENST00000465039 DCPSQ96C86 337 aaKnown RBP16.76■□□□□ 0.27
LIMD1-203ENST00000465039 ZDHHC15Q96MV8 337 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms