RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 ETF1P62495 437 aaKnown RBP14.62□□□□□ -0.07
CLCNKA-204ENST00000464764 TRIM65Q6PJ69 517 aa14.62□□□□□ -0.07
CLCNKA-204ENST00000464764 MED1Q15648 1581 aaPredicted RBP14.61□□□□□ -0.07
CLCNKA-204ENST00000464764 TMEM232C9JQI7 657 aa14.61□□□□□ -0.07
CLCNKA-204ENST00000464764 KIF2AO00139 706 aaPredicted RBP14.61□□□□□ -0.07
CLCNKA-204ENST00000464764 NEK11Q8NG66 645 aa14.61□□□□□ -0.07
CLCNKA-204ENST00000464764 UBXN4Q92575 508 aa14.61□□□□□ -0.07
CLCNKA-204ENST00000464764 PHF8Q9UPP1 1060 aa14.61□□□□□ -0.07
CLCNKA-204ENST00000464764 TBX22Q9Y458 520 aa14.61□□□□□ -0.07
CLCNKA-204ENST00000464764 HEG1Q9ULI3 1381 aa14.61□□□□□ -0.07
CLCNKA-204ENST00000464764 PSDA5PKW4 1024 aaPredicted RBP14.61□□□□□ -0.07
CLCNKA-204ENST00000464764 SPTLC2O15270 562 aa14.61□□□□□ -0.07
CLCNKA-204ENST00000464764 CCDC150Q8NCX0 1101 aa14.61□□□□□ -0.07
CLCNKA-204ENST00000464764 ORC3Q9UBD5 711 aaPredicted RBP14.61□□□□□ -0.07
CLCNKA-204ENST00000464764 WDHD1O75717 1129 aaPredicted RBP14.6□□□□□ -0.07
CLCNKA-204ENST00000464764 CAPN2P17655 700 aa14.6□□□□□ -0.07
CLCNKA-204ENST00000464764 CYP2C19P33261 490 aa14.6□□□□□ -0.07
CLCNKA-204ENST00000464764 HSP90AB3PQ58FF7 597 aa14.6□□□□□ -0.07
CLCNKA-204ENST00000464764 PLCD3Q8N3E9 789 aa14.6□□□□□ -0.07
CLCNKA-204ENST00000464764 METTL22Q9BUU2 404 aaPredicted RBP14.6□□□□□ -0.07
CLCNKA-204ENST00000464764 ST5P78524 1137 aa14.6□□□□□ -0.07
CLCNKA-204ENST00000464764 ANKRD13DQ6ZTN6 518 aa14.6□□□□□ -0.07
CLCNKA-204ENST00000464764 AIFM3Q96NN9 605 aa14.6□□□□□ -0.07
CLCNKA-204ENST00000464764 UBR1Q8IWV7 1749 aa14.6□□□□□ -0.07
CLCNKA-204ENST00000464764 A0A087WZG4 1122 aa14.6□□□□□ -0.07
CLCNKA-204ENST00000464764 HMGB1P09429 215 aaKnown RBP14.6□□□□□ -0.07
CLCNKA-204ENST00000464764 PFKFB1P16118 471 aa14.6□□□□□ -0.07
CLCNKA-204ENST00000464764 NLRP12P59046 1061 aa14.6□□□□□ -0.07
CLCNKA-204ENST00000464764 LMBR1LQ6UX01 489 aa14.6□□□□□ -0.07
CLCNKA-204ENST00000464764 NFATC2IPQ8NCF5 419 aa14.6□□□□□ -0.07
CLCNKA-204ENST00000464764 C8orf76Q96K31 380 aa14.6□□□□□ -0.07
CLCNKA-204ENST00000464764 AGXT2Q9BYV1 514 aa14.6□□□□□ -0.07
CLCNKA-204ENST00000464764 PAG1Q9NWQ8 432 aa14.6□□□□□ -0.07
CLCNKA-204ENST00000464764 AXIN2Q9Y2T1 843 aa14.6□□□□□ -0.07
CLCNKA-204ENST00000464764 KDM3BQ7LBC6 1761 aa14.59□□□□□ -0.07
CLCNKA-204ENST00000464764 SASH3O75995 380 aa14.59□□□□□ -0.07
CLCNKA-204ENST00000464764 ZRANB2O95218 330 aaKnown RBP eCLIP14.59□□□□□ -0.07
CLCNKA-204ENST00000464764 GYS2P54840 703 aa14.59□□□□□ -0.07
CLCNKA-204ENST00000464764 PSME1Q06323 249 aa14.59□□□□□ -0.07
CLCNKA-204ENST00000464764 MROH7-TTC4A0A0A0MT08 1334 aa14.59□□□□□ -0.07
CLCNKA-204ENST00000464764 M0R2C6 588 aa14.59□□□□□ -0.07
CLCNKA-204ENST00000464764 UBASH3AP57075 661 aa14.59□□□□□ -0.07
CLCNKA-204ENST00000464764 AMOTQ4VCS5 1084 aa14.59□□□□□ -0.07
CLCNKA-204ENST00000464764 ZNF790Q6PG37 636 aa14.59□□□□□ -0.07
CLCNKA-204ENST00000464764 TMCO3Q6UWJ1 677 aa14.59□□□□□ -0.07
CLCNKA-204ENST00000464764 MNS1Q8NEH6 495 aa14.59□□□□□ -0.07
CLCNKA-204ENST00000464764 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.59□□□□□ -0.07
CLCNKA-204ENST00000464764 A0A1W2PQ27 194 aa14.58□□□□□ -0.07
CLCNKA-204ENST00000464764 A0A1W2PQ64 194 aa14.58□□□□□ -0.07
CLCNKA-204ENST00000464764 A0A1W2PQD8 194 aa14.58□□□□□ -0.07
CLCNKA-204ENST00000464764 SERPINC1P01008 464 aa14.58□□□□□ -0.07
CLCNKA-204ENST00000464764 CFAP100Q494V2 611 aa14.58□□□□□ -0.07
CLCNKA-204ENST00000464764 AXDND1Q5T1B0 1012 aaPredicted RBP14.58□□□□□ -0.07
CLCNKA-204ENST00000464764 MYSM1Q5VVJ2 828 aa14.58□□□□□ -0.07
CLCNKA-204ENST00000464764 REXO1L1PQ8IX06 675 aa14.58□□□□□ -0.07
CLCNKA-204ENST00000464764 CCDC34Q96HJ3 373 aa14.58□□□□□ -0.07
CLCNKA-204ENST00000464764 NCAPD2Q15021 1401 aa14.58□□□□□ -0.08
CLCNKA-204ENST00000464764 MAST3O60307 1309 aa14.58□□□□□ -0.08
CLCNKA-204ENST00000464764 PNOCQ13519 176 aa14.58□□□□□ -0.08
CLCNKA-204ENST00000464764 ESCO1Q5FWF5 840 aa14.58□□□□□ -0.08
CLCNKA-204ENST00000464764 ATL3Q6DD88 541 aa14.58□□□□□ -0.08
CLCNKA-204ENST00000464764 ANKRD24Q8TF21 1146 aa14.58□□□□□ -0.08
CLCNKA-204ENST00000464764 ZNF274Q96GC6 653 aaPredicted RBP14.58□□□□□ -0.08
CLCNKA-204ENST00000464764 ZNF496Q96IT1 587 aaPredicted RBP14.58□□□□□ -0.08
CLCNKA-204ENST00000464764 ZNF594Q96JF6 807 aaPredicted RBP14.58□□□□□ -0.08
CLCNKA-204ENST00000464764 MARF1Q9Y4F3 1742 aaKnown RBP14.58□□□□□ -0.08
CLCNKA-204ENST00000464764 DENND2AQ9ULE3 1009 aa14.57□□□□□ -0.08
CLCNKA-204ENST00000464764 PALLDQ8WX93 1383 aa14.57□□□□□ -0.08
CLCNKA-204ENST00000464764 TADA3O75528 432 aa14.57□□□□□ -0.08
CLCNKA-204ENST00000464764 FBXO18Q8NFZ0 1043 aa14.57□□□□□ -0.08
CLCNKA-204ENST00000464764 OSBP2Q969R2 916 aa14.57□□□□□ -0.08
CLCNKA-204ENST00000464764 CLIC6Q96NY7 704 aa14.57□□□□□ -0.08
CLCNKA-204ENST00000464764 WDR24Q96S15 920 aa14.57□□□□□ -0.08
CLCNKA-204ENST00000464764 PARP3Q9Y6F1 533 aa14.57□□□□□ -0.08
CLCNKA-204ENST00000464764 RGPD2P0DJD1 1756 aa14.57□□□□□ -0.08
CLCNKA-204ENST00000464764 SH3TC1Q8TE82 1336 aa14.57□□□□□ -0.08
CLCNKA-204ENST00000464764 KLF18A0A0U1RQI7 1052 aa14.57□□□□□ -0.08
CLCNKA-204ENST00000464764 RXRAP19793 462 aa14.57□□□□□ -0.08
CLCNKA-204ENST00000464764 EVCP57679 992 aa14.57□□□□□ -0.08
CLCNKA-204ENST00000464764 ZMYM1Q5SVZ6 1142 aa14.57□□□□□ -0.08
CLCNKA-204ENST00000464764 SYNE3Q6ZMZ3 975 aa14.57□□□□□ -0.08
CLCNKA-204ENST00000464764 NKX2-3Q8TAU0 364 aa14.57□□□□□ -0.08
CLCNKA-204ENST00000464764 KCNG4Q8TDN1 519 aa14.57□□□□□ -0.08
CLCNKA-204ENST00000464764 DSCC1Q9BVC3 393 aa14.57□□□□□ -0.08
CLCNKA-204ENST00000464764 CALCOCO1Q9P1Z2 691 aa14.57□□□□□ -0.08
CLCNKA-204ENST00000464764 BPIFA3Q9BQP9 254 aa14.56□□□□□ -0.08
CLCNKA-204ENST00000464764 FANCLQ9NW38 375 aa14.56□□□□□ -0.08
CLCNKA-204ENST00000464764 GOLGA8BA8MQT2 603 aa14.56□□□□□ -0.08
CLCNKA-204ENST00000464764 FKBP4Q02790 459 aaKnown RBP eCLIP14.56□□□□□ -0.08
CLCNKA-204ENST00000464764 GNL2Q13823 731 aaKnown RBP14.56□□□□□ -0.08
CLCNKA-204ENST00000464764 LRRC24Q50LG9 513 aa14.56□□□□□ -0.08
CLCNKA-204ENST00000464764 ANO1Q5XXA6 986 aa14.56□□□□□ -0.08
CLCNKA-204ENST00000464764 SMARCE1Q969G3 411 aa14.56□□□□□ -0.08
CLCNKA-204ENST00000464764 HPS5Q9UPZ3 1129 aa14.56□□□□□ -0.08
CLCNKA-204ENST00000464764 ANKARQ7Z5J8 1434 aa14.56□□□□□ -0.08
CLCNKA-204ENST00000464764 VWA3AA6NCI4 1184 aa14.55□□□□□ -0.08
CLCNKA-204ENST00000464764 GCP02774 474 aa14.55□□□□□ -0.08
CLCNKA-204ENST00000464764 TPM4P67936 248 aa14.55□□□□□ -0.08
CLCNKA-204ENST00000464764 SPECC1Q5M775 1068 aa14.55□□□□□ -0.08
CLCNKA-204ENST00000464764 FOXP4Q8IVH2 680 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms