RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 GALNT6Q8NCL4 622 aa5.92□□□□□ -1.46
HMGXB4-205ENST00000464480 LACRTQ9GZZ8 138 aa5.92□□□□□ -1.46
HMGXB4-205ENST00000464480 ADAM19Q9H013 955 aa5.92□□□□□ -1.46
HMGXB4-205ENST00000464480 MUC3BQ9H195 1237 aa5.92□□□□□ -1.46
HMGXB4-205ENST00000464480 CCSER2Q9H7U1 834 aa5.92□□□□□ -1.46
HMGXB4-205ENST00000464480 GPN3Q9UHW5 284 aaPredicted RBP5.92□□□□□ -1.46
HMGXB4-205ENST00000464480 SOX13Q9UN79 622 aa5.92□□□□□ -1.46
HMGXB4-205ENST00000464480 TRIM33Q9UPN9 1127 aa5.92□□□□□ -1.46
HMGXB4-205ENST00000464480 LILRB5O75023 590 aa5.91□□□□□ -1.46
HMGXB4-205ENST00000464480 ALBP02768 609 aa5.91□□□□□ -1.46
HMGXB4-205ENST00000464480 BCRP11274 1271 aa5.91□□□□□ -1.46
HMGXB4-205ENST00000464480 AMPD1P23109 780 aa5.91□□□□□ -1.46
HMGXB4-205ENST00000464480 LORP23490 312 aaPredicted RBP5.91□□□□□ -1.46
HMGXB4-205ENST00000464480 CDC27P30260 824 aa5.91□□□□□ -1.46
HMGXB4-205ENST00000464480 ZC3H6P61129 1189 aaKnown RBP5.91□□□□□ -1.46
HMGXB4-205ENST00000464480 PWP1Q13610 501 aa5.91□□□□□ -1.46
HMGXB4-205ENST00000464480 USP48Q86UV5 1035 aa5.91□□□□□ -1.46
HMGXB4-205ENST00000464480 C8orf37Q96NL8 207 aa5.91□□□□□ -1.46
HMGXB4-205ENST00000464480 TGIF2Q9GZN2 237 aa5.91□□□□□ -1.46
HMGXB4-205ENST00000464480 H3BRJ5 948 aa5.9□□□□□ -1.46
HMGXB4-205ENST00000464480 M0R082 166 aa5.9□□□□□ -1.46
HMGXB4-205ENST00000464480 FBXO24O75426 580 aa5.9□□□□□ -1.46
HMGXB4-205ENST00000464480 PPP2R3AQ06190 1150 aa5.9□□□□□ -1.46
HMGXB4-205ENST00000464480 PCDH1Q08174 1060 aa5.9□□□□□ -1.46
HMGXB4-205ENST00000464480 FAM117BQ6P1L5 589 aa5.9□□□□□ -1.46
HMGXB4-205ENST00000464480 C20orf204Q6ZNR8 217 aa5.9□□□□□ -1.46
HMGXB4-205ENST00000464480 C1orf229Q6ZS94 237 aaPredicted RBP5.9□□□□□ -1.46
HMGXB4-205ENST00000464480 ZNF417Q8TAU3 575 aa5.9□□□□□ -1.46
HMGXB4-205ENST00000464480 DDX54Q8TDD1 881 aaKnown RBP5.9□□□□□ -1.46
HMGXB4-205ENST00000464480 ZNF587Q96SQ5 575 aaPredicted RBP5.9□□□□□ -1.46
HMGXB4-205ENST00000464480 TMEM39AQ9NV64 488 aa5.9□□□□□ -1.46
HMGXB4-205ENST00000464480 STARD13Q9Y3M8 1113 aa5.9□□□□□ -1.46
HMGXB4-205ENST00000464480 B3GALT4O96024 378 aa5.89□□□□□ -1.47
HMGXB4-205ENST00000464480 CELA2BP08218 269 aaPredicted RBP5.89□□□□□ -1.47
HMGXB4-205ENST00000464480 EPHA1P21709 976 aa5.89□□□□□ -1.47
HMGXB4-205ENST00000464480 RAD51AP2Q09MP3 1159 aa5.89□□□□□ -1.47
HMGXB4-205ENST00000464480 IKBKEQ14164 716 aa5.89□□□□□ -1.47
HMGXB4-205ENST00000464480 ZNF385CQ66K41 422 aaPredicted RBP5.89□□□□□ -1.47
HMGXB4-205ENST00000464480 ERMP1Q7Z2K6 904 aa5.89□□□□□ -1.47
HMGXB4-205ENST00000464480 VN1R5Q7Z5H4 357 aa5.89□□□□□ -1.47
HMGXB4-205ENST00000464480 PODNQ7Z5L7 613 aa5.89□□□□□ -1.47
HMGXB4-205ENST00000464480 RELL1Q8IUW5 271 aa5.89□□□□□ -1.47
HMGXB4-205ENST00000464480 ZNF654Q8IZM8 581 aa5.89□□□□□ -1.47
HMGXB4-205ENST00000464480 SCARF2Q96GP6 870 aaPredicted RBP5.89□□□□□ -1.47
HMGXB4-205ENST00000464480 NECAB3Q96P71 396 aaPredicted RBP5.89□□□□□ -1.47
HMGXB4-205ENST00000464480 RSRP1Q9BUV0 290 aa5.89□□□□□ -1.47
HMGXB4-205ENST00000464480 SEC31BQ9NQW1 1179 aa5.89□□□□□ -1.47
HMGXB4-205ENST00000464480 ADAMTS8Q9UP79 889 aa5.89□□□□□ -1.47
HMGXB4-205ENST00000464480 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.89□□□□□ -1.47
HMGXB4-205ENST00000464480 SAMM50Q9Y512 469 aa5.89□□□□□ -1.47
HMGXB4-205ENST00000464480 PPME1Q9Y570 386 aa5.89□□□□□ -1.47
HMGXB4-205ENST00000464480 SHISA8B8ZZ34 492 aa5.88□□□□□ -1.47
HMGXB4-205ENST00000464480 ENC1O14682 589 aa5.88□□□□□ -1.47
HMGXB4-205ENST00000464480 EIF4EBP3O60516 100 aaPredicted RBP5.88□□□□□ -1.47
HMGXB4-205ENST00000464480 CELA3AP09093 270 aa5.88□□□□□ -1.47
HMGXB4-205ENST00000464480 ESRRAP11474 423 aaPredicted RBP5.88□□□□□ -1.47
HMGXB4-205ENST00000464480 AFF1P51825 1210 aaKnown RBP5.88□□□□□ -1.47
HMGXB4-205ENST00000464480 FAAP100Q0VG06 881 aa5.88□□□□□ -1.47
HMGXB4-205ENST00000464480 GRIK5Q16478 980 aa5.88□□□□□ -1.47
HMGXB4-205ENST00000464480 ZNF394Q53GI3 561 aa5.88□□□□□ -1.47
HMGXB4-205ENST00000464480 ADAMTSL4Q6UY14 1074 aa5.88□□□□□ -1.47
HMGXB4-205ENST00000464480 WFDC8Q8IUA0 241 aa5.88□□□□□ -1.47
HMGXB4-205ENST00000464480 IL22RA1Q8N6P7 574 aa5.88□□□□□ -1.47
HMGXB4-205ENST00000464480 NEDD1Q8NHV4 660 aa5.88□□□□□ -1.47
HMGXB4-205ENST00000464480 BTBD6Q96KE9 485 aa5.88□□□□□ -1.47
HMGXB4-205ENST00000464480 PRDM6Q9NQX0 595 aa5.88□□□□□ -1.47
HMGXB4-205ENST00000464480 SH2B1Q9NRF2 756 aaPredicted RBP5.88□□□□□ -1.47
HMGXB4-205ENST00000464480 PCDHGB7Q9Y5F8 929 aa5.88□□□□□ -1.47
HMGXB4-205ENST00000464480 LMNB1P20700 586 aa5.87□□□□□ -1.47
HMGXB4-205ENST00000464480 ARL4DP49703 201 aa5.87□□□□□ -1.47
HMGXB4-205ENST00000464480 LIG3P49916 1009 aa5.87□□□□□ -1.47
HMGXB4-205ENST00000464480 PIP4K2BP78356 416 aa5.87□□□□□ -1.47
HMGXB4-205ENST00000464480 GNL2Q13823 731 aaKnown RBP5.87□□□□□ -1.47
HMGXB4-205ENST00000464480 MAP3K11Q16584 847 aa5.87□□□□□ -1.47
HMGXB4-205ENST00000464480 MSL1Q68DK7 614 aa5.87□□□□□ -1.47
HMGXB4-205ENST00000464480 TTBK2Q6IQ55 1244 aa5.87□□□□□ -1.47
HMGXB4-205ENST00000464480 LYPD4Q6UWN0 246 aa5.87□□□□□ -1.47
HMGXB4-205ENST00000464480 WNT8BQ93098 351 aa5.87□□□□□ -1.47
HMGXB4-205ENST00000464480 SOX17Q9H6I2 414 aaPredicted RBP5.87□□□□□ -1.47
HMGXB4-205ENST00000464480 KBTBD4Q9NVX7 518 aa5.87□□□□□ -1.47
HMGXB4-205ENST00000464480 DDX41Q9UJV9 622 aaKnown RBP5.87□□□□□ -1.47
HMGXB4-205ENST00000464480 CDC25BP30305 580 aa5.86□□□□□ -1.47
HMGXB4-205ENST00000464480 GBP2P32456 591 aaPredicted RBP5.86□□□□□ -1.47
HMGXB4-205ENST00000464480 ZNF157P51786 506 aaPredicted RBP5.86□□□□□ -1.47
HMGXB4-205ENST00000464480 RPS26P62854 115 aaKnown RBP5.86□□□□□ -1.47
HMGXB4-205ENST00000464480 ZNF423Q2M1K9 1284 aa5.86□□□□□ -1.47
HMGXB4-205ENST00000464480 NAALADL2Q58DX5 795 aa5.86□□□□□ -1.47
HMGXB4-205ENST00000464480 DCAF11Q8TEB1 546 aa5.86□□□□□ -1.47
HMGXB4-205ENST00000464480 TMEM74Q96NL1 305 aa5.86□□□□□ -1.47
HMGXB4-205ENST00000464480 TRIM56Q9BRZ2 755 aaKnown RBP5.86□□□□□ -1.47
HMGXB4-205ENST00000464480 SRA1Q9HD15 236 aaKnown RBP5.86□□□□□ -1.47
HMGXB4-205ENST00000464480 COPRSQ9NQ92 184 aa5.86□□□□□ -1.47
HMGXB4-205ENST00000464480 LINC01387J3KSC0 135 aa5.85□□□□□ -1.47
HMGXB4-205ENST00000464480 PIK3R2O00459 728 aa5.85□□□□□ -1.47
HMGXB4-205ENST00000464480 ARHGEF15O94989 841 aa5.85□□□□□ -1.47
HMGXB4-205ENST00000464480 NME2P22392 152 aa5.85□□□□□ -1.47
HMGXB4-205ENST00000464480 DGKGP49619 791 aa5.85□□□□□ -1.47
HMGXB4-205ENST00000464480 RACK1P63244 317 aaKnown RBP5.85□□□□□ -1.47
HMGXB4-205ENST00000464480 HNRNPUQ00839 825 aaKnown RBP eCLIP5.85□□□□□ -1.47
HMGXB4-205ENST00000464480 C19orf57Q0VDD7 668 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms