RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 CD2BP2O95400 341 aaKnown RBP4.28□□□□□ -1.72
COL8A1-205ENST00000463753 ST5P78524 1137 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 ELF2Q15723 593 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 PKN2Q16513 984 aaKnown RBP4.28□□□□□ -1.72
COL8A1-205ENST00000463753 FOXD4L6Q3SYB3 417 aaPredicted RBP4.28□□□□□ -1.72
COL8A1-205ENST00000463753 NUTM2GQ5VZR2 741 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 FBXO38Q6PIJ6 1188 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 FOXD4L3Q6VB84 417 aaPredicted RBP4.28□□□□□ -1.72
COL8A1-205ENST00000463753 ARMCX6Q7L4S7 300 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 SRLQ86TD4 932 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 GAS2L2Q8NHY3 880 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 FAM117AQ9C073 453 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 LMBRD1Q9NUN5 540 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 IFT57Q9NWB7 429 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 IRAK4Q9NWZ3 460 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 NSFL1CQ9UNZ2 370 aaKnown RBP4.28□□□□□ -1.72
COL8A1-205ENST00000463753 MYBBP1AQ9BQG0 1328 aaKnown RBP4.28□□□□□ -1.72
COL8A1-205ENST00000463753 SKIV2LQ15477 1246 aaKnown RBP4.27□□□□□ -1.73
COL8A1-205ENST00000463753 MAP9Q49MG5 647 aa4.27□□□□□ -1.73
COL8A1-205ENST00000463753 NAIF1Q69YI7 327 aaPredicted RBP4.27□□□□□ -1.73
COL8A1-205ENST00000463753 RSBN1LQ6PCB5 846 aaPredicted RBP4.27□□□□□ -1.73
COL8A1-205ENST00000463753 NBPF15Q8N660 670 aa4.27□□□□□ -1.73
COL8A1-205ENST00000463753 OTUD6BQ8N6M0 293 aa4.27□□□□□ -1.73
COL8A1-205ENST00000463753 PANK1Q8TE04 598 aa4.27□□□□□ -1.73
COL8A1-205ENST00000463753 SMARCE1Q969G3 411 aa4.27□□□□□ -1.73
COL8A1-205ENST00000463753 KCNH6Q9H252 994 aa4.27□□□□□ -1.73
COL8A1-205ENST00000463753 UBR3Q6ZT12 1888 aa4.27□□□□□ -1.73
COL8A1-205ENST00000463753 HSPA8P11142 646 aaKnown RBP4.27□□□□□ -1.73
COL8A1-205ENST00000463753 CCT2P78371 535 aaKnown RBP4.27□□□□□ -1.73
COL8A1-205ENST00000463753 PKP1Q13835 747 aa4.27□□□□□ -1.73
COL8A1-205ENST00000463753 WDR43Q15061 677 aaKnown RBP eCLIP4.27□□□□□ -1.73
COL8A1-205ENST00000463753 NEUROD2Q15784 382 aa4.27□□□□□ -1.73
COL8A1-205ENST00000463753 TMEM132AQ24JP5 1023 aa4.27□□□□□ -1.73
COL8A1-205ENST00000463753 MCTP2Q6DN12 878 aa4.27□□□□□ -1.73
COL8A1-205ENST00000463753 FAM184AQ8NB25 1140 aa4.27□□□□□ -1.73
COL8A1-205ENST00000463753 CLUAP1Q96AJ1 413 aa4.27□□□□□ -1.73
COL8A1-205ENST00000463753 SMTNL1A8MU46 457 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 PPEF1O14829 653 aaPredicted RBP4.26□□□□□ -1.73
COL8A1-205ENST00000463753 IBSPP21815 317 aaPredicted RBP4.26□□□□□ -1.73
COL8A1-205ENST00000463753 PDE6BP35913 854 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 PLA2G5P39877 138 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 LMAN1P49257 510 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 MNAT1P51948 309 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 SETQ01105 290 aaPredicted RBP4.26□□□□□ -1.73
COL8A1-205ENST00000463753 GPS2Q13227 327 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 ZKSCAN8Q15776 578 aaPredicted RBP4.26□□□□□ -1.73
COL8A1-205ENST00000463753 MYSM1Q5VVJ2 828 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 ARMC3Q5W041 872 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 PPP2R2DQ66LE6 453 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 MORC1Q86VD1 984 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 RDH13Q8NBN7 331 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 IL21Q9HBE4 155 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 CFDP1Q9UEE9 299 aaPredicted RBP4.26□□□□□ -1.73
COL8A1-205ENST00000463753 EXOC6BQ9Y2D4 811 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 AMOTL2Q9Y2J4 779 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 CRB1P82279 1406 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 K7ELQ4 463 aaPredicted RBP4.26□□□□□ -1.73
COL8A1-205ENST00000463753 SKIDA1Q1XH10 827 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 MSS51Q4VC12 460 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 MUM1L1Q5H9M0 696 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 CREBRFQ8IUR6 639 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 KIAA1524Q8TCG1 905 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.26□□□□□ -1.73
COL8A1-205ENST00000463753 ATG3Q9NT62 314 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 ZNF215Q9UL58 517 aaPredicted RBP4.26□□□□□ -1.73
COL8A1-205ENST00000463753 NSD2O96028 1365 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 NR1I2O75469 434 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 APBA3O96018 575 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 TPD52L1Q16890 204 aaPredicted RBP4.26□□□□□ -1.73
COL8A1-205ENST00000463753 DNAAF4Q8WXU2 420 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 KIF1BPQ96EK5 621 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 KCNF1Q9H3M0 494 aa4.26□□□□□ -1.73
COL8A1-205ENST00000463753 ZCCHC17Q9NP64 241 aaKnown RBP4.26□□□□□ -1.73
COL8A1-205ENST00000463753 BIN2Q9UBW5 565 aaPredicted RBP4.26□□□□□ -1.73
COL8A1-205ENST00000463753 HTATSF1O43719 755 aaKnown RBP4.25□□□□□ -1.73
COL8A1-205ENST00000463753 TPM3P06753 285 aa4.25□□□□□ -1.73
COL8A1-205ENST00000463753 HMGB1P09429 215 aaKnown RBP4.25□□□□□ -1.73
COL8A1-205ENST00000463753 LIG1P18858 919 aa4.25□□□□□ -1.73
COL8A1-205ENST00000463753 GSCP56915 257 aaPredicted RBP4.25□□□□□ -1.73
COL8A1-205ENST00000463753 TPM4P67936 248 aa4.25□□□□□ -1.73
COL8A1-205ENST00000463753 GPR162Q16538 588 aa4.25□□□□□ -1.73
COL8A1-205ENST00000463753 BRICD5Q6PL45 260 aa4.25□□□□□ -1.73
COL8A1-205ENST00000463753 CWC27Q6UX04 472 aaKnown RBP4.25□□□□□ -1.73
COL8A1-205ENST00000463753 GIMAP7Q8NHV1 300 aa4.25□□□□□ -1.73
COL8A1-205ENST00000463753 ITFG2Q969R8 447 aa4.25□□□□□ -1.73
COL8A1-205ENST00000463753 TOGARAM1Q9Y4F4 1720 aa4.25□□□□□ -1.73
COL8A1-205ENST00000463753 RASSF10A6NK89 507 aa4.25□□□□□ -1.73
COL8A1-205ENST00000463753 HCLS1P14317 486 aaPredicted RBP4.25□□□□□ -1.73
COL8A1-205ENST00000463753 MAGEA9P43362 315 aa4.25□□□□□ -1.73
COL8A1-205ENST00000463753 FUT2Q10981 343 aa4.25□□□□□ -1.73
COL8A1-205ENST00000463753 IDI1Q13907 227 aa4.25□□□□□ -1.73
COL8A1-205ENST00000463753 Q3C1V9 767 aa4.25□□□□□ -1.73
COL8A1-205ENST00000463753 ZC3H12AQ5D1E8 599 aaKnown RBP4.25□□□□□ -1.73
COL8A1-205ENST00000463753 DNAJC14Q6Y2X3 702 aaPredicted RBP4.25□□□□□ -1.73
COL8A1-205ENST00000463753 DRC7Q8IY82 874 aa4.25□□□□□ -1.73
COL8A1-205ENST00000463753 PDRG1Q9NUG6 133 aa4.25□□□□□ -1.73
COL8A1-205ENST00000463753 PIK3C2GO75747 1445 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 NPC1L1Q9UHC9 1359 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 KLHL33A6NCF5 533 aa4.24□□□□□ -1.73
COL8A1-205ENST00000463753 EIF3CLB5ME19 914 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms