RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 GNL3LQ9NVN8 582 aaKnown RBP16.96■□□□□ 0.31
PHACTR4-203ENST00000463428 GLRX3O76003 335 aaKnown RBP16.96■□□□□ 0.3
PHACTR4-203ENST00000463428 PI16Q6UXB8 463 aa16.96■□□□□ 0.3
PHACTR4-203ENST00000463428 PDS5AQ29RF7 1337 aaKnown RBP16.95■□□□□ 0.3
PHACTR4-203ENST00000463428 FAM205AQ6ZU69 1335 aa16.95■□□□□ 0.3
PHACTR4-203ENST00000463428 ERC2O15083 957 aa16.95■□□□□ 0.3
PHACTR4-203ENST00000463428 ZAP70P43403 619 aa16.95■□□□□ 0.3
PHACTR4-203ENST00000463428 RGS3P49796 1198 aa16.95■□□□□ 0.3
PHACTR4-203ENST00000463428 NIM1KQ8IY84 436 aa16.95■□□□□ 0.3
PHACTR4-203ENST00000463428 SPATA5Q8NB90 893 aa16.95■□□□□ 0.3
PHACTR4-203ENST00000463428 HAUS7Q99871 368 aa16.95■□□□□ 0.3
PHACTR4-203ENST00000463428 SNRKQ9NRH2 765 aa16.95■□□□□ 0.3
PHACTR4-203ENST00000463428 DENND2AQ9ULE3 1009 aa16.95■□□□□ 0.3
PHACTR4-203ENST00000463428 ZNRF3Q9ULT6 936 aa16.95■□□□□ 0.3
PHACTR4-203ENST00000463428 MYO5AQ9Y4I1 1855 aaKnown RBP16.94■□□□□ 0.3
PHACTR4-203ENST00000463428 G3V3G9 751 aa16.94■□□□□ 0.3
PHACTR4-203ENST00000463428 FZD9O00144 591 aa16.94■□□□□ 0.3
PHACTR4-203ENST00000463428 DCAF8Q5TAQ9 597 aa16.94■□□□□ 0.3
PHACTR4-203ENST00000463428 NDUFB9Q9Y6M9 179 aa16.94■□□□□ 0.3
PHACTR4-203ENST00000463428 CYP2E1P05181 493 aaPredicted RBP16.93■□□□□ 0.3
PHACTR4-203ENST00000463428 GTF2IP78347 998 aa16.93■□□□□ 0.3
PHACTR4-203ENST00000463428 TTC22Q5TAA0 569 aa16.93■□□□□ 0.3
PHACTR4-203ENST00000463428 JDP2Q8WYK2 163 aa16.93■□□□□ 0.3
PHACTR4-203ENST00000463428 FRAT2O75474 233 aaPredicted RBP16.92■□□□□ 0.3
PHACTR4-203ENST00000463428 GSPT1P15170 499 aaKnown RBP16.92■□□□□ 0.3
PHACTR4-203ENST00000463428 STRIP1Q5VSL9 837 aa16.92■□□□□ 0.3
PHACTR4-203ENST00000463428 C9orf131Q5VYM1 1079 aa16.92■□□□□ 0.3
PHACTR4-203ENST00000463428 EDC3Q96F86 508 aaKnown RBP16.92■□□□□ 0.3
PHACTR4-203ENST00000463428 ANTXR1Q9H6X2 564 aa16.92■□□□□ 0.3
PHACTR4-203ENST00000463428 CXCL9Q07325 125 aa16.91■□□□□ 0.3
PHACTR4-203ENST00000463428 CHAF1AQ13111 956 aaPredicted RBP16.91■□□□□ 0.3
PHACTR4-203ENST00000463428 DACT2Q5SW24 774 aa16.91■□□□□ 0.3
PHACTR4-203ENST00000463428 TTLL5Q6EMB2 1281 aa16.91■□□□□ 0.3
PHACTR4-203ENST00000463428 RNF181Q9P0P0 153 aa16.91■□□□□ 0.3
PHACTR4-203ENST00000463428 JAG2Q9Y219 1238 aa16.91■□□□□ 0.3
PHACTR4-203ENST00000463428 UTRNP46939 3433 aa16.91■□□□□ 0.3
PHACTR4-203ENST00000463428 SALL1Q9NSC2 1324 aa16.91■□□□□ 0.3
PHACTR4-203ENST00000463428 TIAM2Q8IVF5 1701 aa16.9■□□□□ 0.3
PHACTR4-203ENST00000463428 DOCK2Q92608 1830 aa16.9■□□□□ 0.3
PHACTR4-203ENST00000463428 USP17L3A6NCW0 530 aa16.9■□□□□ 0.3
PHACTR4-203ENST00000463428 USP17L4A6NCW7 530 aa16.9■□□□□ 0.3
PHACTR4-203ENST00000463428 MAP4K4O95819 1239 aaPredicted RBP16.9■□□□□ 0.3
PHACTR4-203ENST00000463428 VIL1P09327 827 aaKnown RBP16.9■□□□□ 0.3
PHACTR4-203ENST00000463428 FKBP1AP62942 108 aaKnown RBP16.9■□□□□ 0.3
PHACTR4-203ENST00000463428 TBC1D9Q6ZT07 1266 aa16.9■□□□□ 0.3
PHACTR4-203ENST00000463428 USP17L1Q7RTZ2 530 aa16.9■□□□□ 0.3
PHACTR4-203ENST00000463428 CERS5Q8N5B7 392 aa16.9■□□□□ 0.3
PHACTR4-203ENST00000463428 WDR66Q8TBY9 1149 aa16.9■□□□□ 0.3
PHACTR4-203ENST00000463428 DNAJC2Q99543 621 aaKnown RBP16.9■□□□□ 0.3
PHACTR4-203ENST00000463428 PIH1D3Q9NQM4 214 aaKnown RBP16.9■□□□□ 0.3
PHACTR4-203ENST00000463428 GOLIM4O00461 696 aa16.89■□□□□ 0.29
PHACTR4-203ENST00000463428 RAD17O75943 681 aa16.89■□□□□ 0.29
PHACTR4-203ENST00000463428 GRIK5Q16478 980 aa16.89■□□□□ 0.29
PHACTR4-203ENST00000463428 MXD3Q9BW11 206 aa16.89■□□□□ 0.29
PHACTR4-203ENST00000463428 PAG1Q9NWQ8 432 aa16.89■□□□□ 0.29
PHACTR4-203ENST00000463428 PSMD14O00487 310 aa16.88■□□□□ 0.29
PHACTR4-203ENST00000463428 AK9Q5TCS8 1911 aa16.88■□□□□ 0.29
PHACTR4-203ENST00000463428 CIAPIN1Q6FI81 312 aa16.88■□□□□ 0.29
PHACTR4-203ENST00000463428 TBC1D22AQ8WUA7 517 aa16.88■□□□□ 0.29
PHACTR4-203ENST00000463428 ZNF541Q9H0D2 1346 aa16.88■□□□□ 0.29
PHACTR4-203ENST00000463428 SDSP20132 328 aa16.87■□□□□ 0.29
PHACTR4-203ENST00000463428 BMP2KLQ5H9B9 411 aa16.87■□□□□ 0.29
PHACTR4-203ENST00000463428 MFSD14BQ5SR56 506 aa16.87■□□□□ 0.29
PHACTR4-203ENST00000463428 GMLQ99445 158 aa16.87■□□□□ 0.29
PHACTR4-203ENST00000463428 MYH7P12883 1935 aa16.87■□□□□ 0.29
PHACTR4-203ENST00000463428 DCAF8L1A6NGE4 600 aa16.87■□□□□ 0.29
PHACTR4-203ENST00000463428 EIF6P56537 245 aaKnown RBP16.87■□□□□ 0.29
PHACTR4-203ENST00000463428 TNIP1Q15025 636 aa16.87■□□□□ 0.29
PHACTR4-203ENST00000463428 TTF1Q15361 905 aaPredicted RBP16.87■□□□□ 0.29
PHACTR4-203ENST00000463428 RSBN1LQ6PCB5 846 aaPredicted RBP16.87■□□□□ 0.29
PHACTR4-203ENST00000463428 KBTBD3Q8NAB2 608 aa16.87■□□□□ 0.29
PHACTR4-203ENST00000463428 EVI5LQ96CN4 794 aa16.87■□□□□ 0.29
PHACTR4-203ENST00000463428 PRDX5P30044 214 aa16.86■□□□□ 0.29
PHACTR4-203ENST00000463428 ZGPATQ8N5A5 531 aaKnown RBP16.86■□□□□ 0.29
PHACTR4-203ENST00000463428 ZNF384Q8TF68 577 aa16.86■□□□□ 0.29
PHACTR4-203ENST00000463428 FBXW7Q969H0 707 aa16.86■□□□□ 0.29
PHACTR4-203ENST00000463428 ABCF2Q9UG63 623 aa16.86■□□□□ 0.29
PHACTR4-203ENST00000463428 SUGT1Q9Y2Z0 365 aa16.86■□□□□ 0.29
PHACTR4-203ENST00000463428 ZC3H4Q9UPT8 1303 aaKnown RBP16.85■□□□□ 0.29
PHACTR4-203ENST00000463428 TRIM6-TRIM34B2RNG4 842 aa16.85■□□□□ 0.29
PHACTR4-203ENST00000463428 CNTROBQ8N137 903 aa16.85■□□□□ 0.29
PHACTR4-203ENST00000463428 RILPL2Q969X0 211 aa16.85■□□□□ 0.29
PHACTR4-203ENST00000463428 ZBTB12Q9Y330 459 aaPredicted RBP16.85■□□□□ 0.29
PHACTR4-203ENST00000463428 IGSF3O75054 1194 aa16.84■□□□□ 0.29
PHACTR4-203ENST00000463428 SPTY2D1Q68D10 685 aaPredicted RBP16.84■□□□□ 0.29
PHACTR4-203ENST00000463428 ERICH6Q7L0X2 663 aa16.84■□□□□ 0.29
PHACTR4-203ENST00000463428 AGBL3Q8NEM8 1001 aa16.84■□□□□ 0.29
PHACTR4-203ENST00000463428 LRP2BPQ9P2M1 347 aa16.84■□□□□ 0.29
PHACTR4-203ENST00000463428 MYO3BQ8WXR4 1341 aa16.83■□□□□ 0.29
PHACTR4-203ENST00000463428 IDH1O75874 414 aaKnown RBP16.83■□□□□ 0.28
PHACTR4-203ENST00000463428 CHGBP05060 677 aa16.83■□□□□ 0.28
PHACTR4-203ENST00000463428 LDHBP07195 334 aaKnown RBP16.83■□□□□ 0.28
PHACTR4-203ENST00000463428 MECOMQ03112 1051 aa16.83■□□□□ 0.28
PHACTR4-203ENST00000463428 TICAM2Q86XR7 235 aa16.83■□□□□ 0.28
PHACTR4-203ENST00000463428 GPC2Q8N158 579 aa16.83■□□□□ 0.28
PHACTR4-203ENST00000463428 NSUN4Q96CB9 384 aaKnown RBP16.83■□□□□ 0.28
PHACTR4-203ENST00000463428 MYH2Q9UKX2 1941 aa16.82■□□□□ 0.28
PHACTR4-203ENST00000463428 DDNO94850 711 aaPredicted RBP16.82■□□□□ 0.28
PHACTR4-203ENST00000463428 RPS12P25398 132 aaKnown RBP16.82■□□□□ 0.28
PHACTR4-203ENST00000463428 ADD2P35612 726 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms