RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 LAMB1P07942 1786 aa26.46■■□□□ 1.83
CPSF7-209ENST00000463244 TAF5LO75529 589 aa26.45■■□□□ 1.82
CPSF7-209ENST00000463244 MAP3K11Q16584 847 aa26.45■■□□□ 1.82
CPSF7-209ENST00000463244 PRPF38BQ5VTL8 546 aaKnown RBP26.45■■□□□ 1.82
CPSF7-209ENST00000463244 PCDH10Q9P2E7 1040 aa26.45■■□□□ 1.82
CPSF7-209ENST00000463244 BRCA2P51587 3418 aa26.45■■□□□ 1.82
CPSF7-209ENST00000463244 SSC5DA1L4H1 1573 aa26.45■■□□□ 1.82
CPSF7-209ENST00000463244 FANCIQ9NVI1 1328 aa26.44■■□□□ 1.82
CPSF7-209ENST00000463244 NCBP3Q53F19 620 aaKnown RBP26.44■■□□□ 1.82
CPSF7-209ENST00000463244 ALDH1A1P00352 501 aa26.43■■□□□ 1.82
CPSF7-209ENST00000463244 IL1R1P14778 569 aa26.43■■□□□ 1.82
CPSF7-209ENST00000463244 FOXO4P98177 505 aa26.43■■□□□ 1.82
CPSF7-209ENST00000463244 HELBQ8NG08 1087 aaPredicted RBP26.43■■□□□ 1.82
CPSF7-209ENST00000463244 PCDHAC2Q9Y5I4 1007 aa26.43■■□□□ 1.82
CPSF7-209ENST00000463244 PPP2R3BQ9Y5P8 575 aa26.43■■□□□ 1.82
CPSF7-209ENST00000463244 IFIT5Q13325 482 aaKnown RBP26.42■■□□□ 1.82
CPSF7-209ENST00000463244 ZNF804AQ7Z570 1209 aa26.42■■□□□ 1.82
CPSF7-209ENST00000463244 SLC10A4Q96EP9 437 aa26.42■■□□□ 1.82
CPSF7-209ENST00000463244 MANSC4A6NHS7 340 aaPredicted RBP26.41■■□□□ 1.82
CPSF7-209ENST00000463244 PPP1R12BO60237 982 aaPredicted RBP26.41■■□□□ 1.82
CPSF7-209ENST00000463244 VAMP4O75379 141 aa26.41■■□□□ 1.82
CPSF7-209ENST00000463244 ZBTB48P10074 688 aaPredicted RBP26.41■■□□□ 1.82
CPSF7-209ENST00000463244 INHBEP58166 350 aa26.41■■□□□ 1.82
CPSF7-209ENST00000463244 FKBP1AP62942 108 aaKnown RBP26.41■■□□□ 1.82
CPSF7-209ENST00000463244 SPDYE2BA6NHP3 402 aa26.4■■□□□ 1.82
CPSF7-209ENST00000463244 SPDYE6P0CI01 402 aa26.4■■□□□ 1.82
CPSF7-209ENST00000463244 CFAP100Q494V2 611 aa26.4■■□□□ 1.82
CPSF7-209ENST00000463244 IFNL1Q8IU54 200 aa26.4■■□□□ 1.82
CPSF7-209ENST00000463244 CLMNQ96JQ2 1002 aa26.4■■□□□ 1.82
CPSF7-209ENST00000463244 F8W031 263 aaPredicted RBP26.39■■□□□ 1.82
CPSF7-209ENST00000463244 MYO1BO43795 1136 aa26.39■■□□□ 1.82
CPSF7-209ENST00000463244 WNK4Q96J92 1243 aa26.39■■□□□ 1.82
CPSF7-209ENST00000463244 CHMP3Q9Y3E7 222 aa26.39■■□□□ 1.82
CPSF7-209ENST00000463244 CLRN2A0PK11 232 aa26.38■■□□□ 1.81
CPSF7-209ENST00000463244 UNCXA6NJT0 531 aa26.38■■□□□ 1.81
CPSF7-209ENST00000463244 BEND3Q5T5X7 828 aa26.38■■□□□ 1.81
CPSF7-209ENST00000463244 PRMT6Q96LA8 375 aaPredicted RBP26.38■■□□□ 1.81
CPSF7-209ENST00000463244 AOX1Q06278 1338 aa26.38■■□□□ 1.81
CPSF7-209ENST00000463244 F6X3S4 739 aa26.37■■□□□ 1.81
CPSF7-209ENST00000463244 SUPT20HL1Q3ZLR7 823 aa26.37■■□□□ 1.81
CPSF7-209ENST00000463244 IGF2BP3O00425 579 aaKnown RBP eCLIP26.36■■□□□ 1.81
CPSF7-209ENST00000463244 LMBR1LQ6UX01 489 aa26.36■■□□□ 1.81
CPSF7-209ENST00000463244 VEZTQ9HBM0 779 aa26.36■■□□□ 1.81
CPSF7-209ENST00000463244 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.36■■□□□ 1.81
CPSF7-209ENST00000463244 JAG2Q9Y219 1238 aa26.36■■□□□ 1.81
CPSF7-209ENST00000463244 KIAA0100Q14667 2235 aaKnown RBP26.35■■□□□ 1.81
CPSF7-209ENST00000463244 EXOSC9Q06265 439 aaKnown RBP26.35■■□□□ 1.81
CPSF7-209ENST00000463244 EPHA10Q5JZY3 1008 aa26.35■■□□□ 1.81
CPSF7-209ENST00000463244 NBPF12Q5TAG4 269 aaPredicted RBP26.35■■□□□ 1.81
CPSF7-209ENST00000463244 ZNF594Q96JF6 807 aaPredicted RBP26.35■■□□□ 1.81
CPSF7-209ENST00000463244 CCDC57Q2TAC2 916 aa26.34■■□□□ 1.81
CPSF7-209ENST00000463244 LDHAL6AQ6ZMR3 332 aa26.34■■□□□ 1.81
CPSF7-209ENST00000463244 WDR63Q8IWG1 891 aa26.34■■□□□ 1.81
CPSF7-209ENST00000463244 TRIM17Q9Y577 477 aa26.34■■□□□ 1.81
CPSF7-209ENST00000463244 OTOFQ9HC10 1997 aa26.33■■□□□ 1.81
CPSF7-209ENST00000463244 IREB2P48200 963 aaKnown RBP26.33■■□□□ 1.81
CPSF7-209ENST00000463244 OTOP1Q7RTM1 612 aa26.33■■□□□ 1.81
CPSF7-209ENST00000463244 GRM8O00222 908 aa26.32■■□□□ 1.8
CPSF7-209ENST00000463244 PLIN1O60240 522 aa26.32■■□□□ 1.8
CPSF7-209ENST00000463244 USP2O75604 605 aaPredicted RBP26.32■■□□□ 1.8
CPSF7-209ENST00000463244 GJA5P36382 358 aa26.32■■□□□ 1.8
CPSF7-209ENST00000463244 RBM5P52756 815 aaKnown RBP eCLIP26.32■■□□□ 1.8
CPSF7-209ENST00000463244 RASA3Q14644 834 aa26.32■■□□□ 1.8
CPSF7-209ENST00000463244 TAF7LQ5H9L4 462 aa26.32■■□□□ 1.8
CPSF7-209ENST00000463244 CNNM1Q9NRU3 951 aa26.32■■□□□ 1.8
CPSF7-209ENST00000463244 FAM205AQ6ZU69 1335 aa26.32■■□□□ 1.8
CPSF7-209ENST00000463244 ARAP2Q8WZ64 1704 aa26.31■■□□□ 1.8
CPSF7-209ENST00000463244 ANKRD13AQ8IZ07 590 aa26.3■■□□□ 1.8
CPSF7-209ENST00000463244 SALL2Q9Y467 1007 aaPredicted RBP26.3■■□□□ 1.8
CPSF7-209ENST00000463244 CRHR2Q13324 411 aa26.29■■□□□ 1.8
CPSF7-209ENST00000463244 TNFAIP1Q13829 316 aa26.29■■□□□ 1.8
CPSF7-209ENST00000463244 SPDYE2Q495Y8 402 aa26.29■■□□□ 1.8
CPSF7-209ENST00000463244 MFSD14BQ5SR56 506 aa26.29■■□□□ 1.8
CPSF7-209ENST00000463244 OTUD7BQ6GQQ9 843 aa26.29■■□□□ 1.8
CPSF7-209ENST00000463244 TDRD7Q8NHU6 1098 aaKnown RBP26.29■■□□□ 1.8
CPSF7-209ENST00000463244 SERPINA10Q9UK55 444 aa26.29■■□□□ 1.8
CPSF7-209ENST00000463244 UBE4AQ14139 1066 aa26.28■■□□□ 1.8
CPSF7-209ENST00000463244 INTS3Q68E01 1043 aaKnown RBP26.28■■□□□ 1.8
CPSF7-209ENST00000463244 ERO1AQ96HE7 468 aa26.28■■□□□ 1.8
CPSF7-209ENST00000463244 MRS2Q9HD23 443 aa26.28■■□□□ 1.8
CPSF7-209ENST00000463244 C9orf78Q9NZ63 289 aaPredicted RBP26.28■■□□□ 1.8
CPSF7-209ENST00000463244 ZNF70Q9UC06 446 aaPredicted RBP26.28■■□□□ 1.8
CPSF7-209ENST00000463244 TTF2Q9UNY4 1162 aaKnown RBP26.28■■□□□ 1.8
CPSF7-209ENST00000463244 TESPA1A2RU30 521 aaPredicted RBP26.27■■□□□ 1.8
CPSF7-209ENST00000463244 PTPN18Q99952 460 aa26.27■■□□□ 1.8
CPSF7-209ENST00000463244 SPINK5Q9NQ38 1064 aaPredicted RBP26.27■■□□□ 1.8
CPSF7-209ENST00000463244 RBBP6Q7Z6E9 1792 aaKnown RBP26.27■■□□□ 1.8
CPSF7-209ENST00000463244 HIBADHP31937 336 aaKnown RBP26.26■■□□□ 1.79
CPSF7-209ENST00000463244 GYG1P46976 350 aa26.26■■□□□ 1.79
CPSF7-209ENST00000463244 FAM84BQ96KN1 310 aaPredicted RBP26.26■■□□□ 1.79
CPSF7-209ENST00000463244 PTPN22Q9Y2R2 807 aa26.26■■□□□ 1.79
CPSF7-209ENST00000463244 ALDH1L1O75891 902 aa26.25■■□□□ 1.79
CPSF7-209ENST00000463244 CD99L2Q8TCZ2 262 aa26.25■■□□□ 1.79
CPSF7-209ENST00000463244 TEPSINQ96N21 525 aa26.25■■□□□ 1.79
CPSF7-209ENST00000463244 TDRD3Q9H7E2 651 aaKnown RBP26.25■■□□□ 1.79
CPSF7-209ENST00000463244 POTEFA5A3E0 1075 aa26.24■■□□□ 1.79
CPSF7-209ENST00000463244 DZIP1LQ8IYY4 767 aaKnown RBP26.24■■□□□ 1.79
CPSF7-209ENST00000463244 OPTNQ96CV9 577 aa26.24■■□□□ 1.79
CPSF7-209ENST00000463244 ELP3Q9H9T3 547 aa26.24■■□□□ 1.79
CPSF7-209ENST00000463244 CDAN1Q8IWY9 1227 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms