RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 EPS15P42566 896 aa24.89■■□□□ 1.58
NUP43-205ENST00000463048 SCNN1DP51172 638 aa24.89■■□□□ 1.58
NUP43-205ENST00000463048 STRIP1Q5VSL9 837 aa24.89■■□□□ 1.58
NUP43-205ENST00000463048 WDR90Q96KV7 1748 aa24.89■■□□□ 1.57
NUP43-205ENST00000463048 MYH13Q9UKX3 1938 aa24.88■■□□□ 1.57
NUP43-205ENST00000463048 POTECB2RU33 542 aa24.88■■□□□ 1.57
NUP43-205ENST00000463048 F8W031 263 aaPredicted RBP24.88■■□□□ 1.57
NUP43-205ENST00000463048 IFIT2P09913 472 aaKnown RBP24.88■■□□□ 1.57
NUP43-205ENST00000463048 TTC39AQ5SRH9 613 aa24.88■■□□□ 1.57
NUP43-205ENST00000463048 B4GALNT3Q6L9W6 998 aa24.88■■□□□ 1.57
NUP43-205ENST00000463048 ZNF646O15015 1829 aaPredicted RBP24.88■■□□□ 1.57
NUP43-205ENST00000463048 MICALL2Q8IY33 904 aa24.87■■□□□ 1.57
NUP43-205ENST00000463048 CERS5Q8N5B7 392 aa24.87■■□□□ 1.57
NUP43-205ENST00000463048 L3MBTL3Q96JM7 780 aaPredicted RBP24.87■■□□□ 1.57
NUP43-205ENST00000463048 HACL1Q9UJ83 578 aa24.87■■□□□ 1.57
NUP43-205ENST00000463048 COL1A1P02452 1464 aaPredicted RBP24.87■■□□□ 1.57
NUP43-205ENST00000463048 VEGFAP15692 232 aaPredicted RBP24.86■■□□□ 1.57
NUP43-205ENST00000463048 CCDC158Q5M9N0 1113 aa24.86■■□□□ 1.57
NUP43-205ENST00000463048 MFSD14BQ5SR56 506 aa24.86■■□□□ 1.57
NUP43-205ENST00000463048 RBM26Q5T8P6 1007 aaKnown RBP24.86■■□□□ 1.57
NUP43-205ENST00000463048 ANKRD45Q5TZF3 282 aa24.86■■□□□ 1.57
NUP43-205ENST00000463048 KIAA0825Q8IV33 1275 aa24.86■■□□□ 1.57
NUP43-205ENST00000463048 GPRC5DQ9NZD1 345 aa24.86■■□□□ 1.57
NUP43-205ENST00000463048 CNOT7Q9UIV1 285 aaKnown RBP24.86■■□□□ 1.57
NUP43-205ENST00000463048 RASGRF1Q13972 1273 aa24.85■■□□□ 1.57
NUP43-205ENST00000463048 EAPPQ56P03 285 aaPredicted RBP24.85■■□□□ 1.57
NUP43-205ENST00000463048 PI16Q6UXB8 463 aa24.85■■□□□ 1.57
NUP43-205ENST00000463048 SNRKQ9NRH2 765 aa24.85■■□□□ 1.57
NUP43-205ENST00000463048 ZBTB47Q9UFB7 747 aaPredicted RBP24.85■■□□□ 1.57
NUP43-205ENST00000463048 FAM205AQ6ZU69 1335 aa24.85■■□□□ 1.57
NUP43-205ENST00000463048 IQCA1LA6NCM1 817 aa24.84■■□□□ 1.57
NUP43-205ENST00000463048 EPHX2P34913 555 aa24.84■■□□□ 1.57
NUP43-205ENST00000463048 SCARF1Q14162 830 aa24.84■■□□□ 1.57
NUP43-205ENST00000463048 GCC1Q96CN9 775 aa24.84■■□□□ 1.57
NUP43-205ENST00000463048 RPS12P25398 132 aaKnown RBP24.83■■□□□ 1.57
NUP43-205ENST00000463048 GRIK5Q16478 980 aa24.83■■□□□ 1.57
NUP43-205ENST00000463048 AGBL3Q8NEM8 1001 aa24.83■■□□□ 1.57
NUP43-205ENST00000463048 GMLQ99445 158 aa24.83■■□□□ 1.57
NUP43-205ENST00000463048 TAF1DQ9H5J8 278 aaPredicted RBP24.83■■□□□ 1.57
NUP43-205ENST00000463048 DENND2AQ9ULE3 1009 aa24.83■■□□□ 1.57
NUP43-205ENST00000463048 H7C1D1 291 aa24.82■■□□□ 1.56
NUP43-205ENST00000463048 USP17L8P0C7I0 530 aa24.82■■□□□ 1.56
NUP43-205ENST00000463048 MCAMP43121 646 aa24.82■■□□□ 1.56
NUP43-205ENST00000463048 TBC1D10BQ4KMP7 808 aaPredicted RBP24.82■■□□□ 1.56
NUP43-205ENST00000463048 SAMD7Q7Z3H4 446 aa24.82■■□□□ 1.56
NUP43-205ENST00000463048 C16orf71Q8IYS4 520 aaPredicted RBP24.82■■□□□ 1.56
NUP43-205ENST00000463048 DPF2Q92785 391 aa24.82■■□□□ 1.56
NUP43-205ENST00000463048 HMG20BQ9P0W2 317 aa24.82■■□□□ 1.56
NUP43-205ENST00000463048 SCN4AP35499 1836 aa24.82■■□□□ 1.56
NUP43-205ENST00000463048 KIF3CO14782 793 aa24.81■■□□□ 1.56
NUP43-205ENST00000463048 UQCRFS1P1P0C7P4 283 aa24.81■■□□□ 1.56
NUP43-205ENST00000463048 ARID4AP29374 1257 aaPredicted RBP24.81■■□□□ 1.56
NUP43-205ENST00000463048 NDUFB9Q9Y6M9 179 aa24.81■■□□□ 1.56
NUP43-205ENST00000463048 MYO3BQ8WXR4 1341 aa24.81■■□□□ 1.56
NUP43-205ENST00000463048 SEMA3EO15041 775 aa24.8■■□□□ 1.56
NUP43-205ENST00000463048 EGFRP00533 1210 aa24.8■■□□□ 1.56
NUP43-205ENST00000463048 POTEIP0CG38 1075 aa24.8■■□□□ 1.56
NUP43-205ENST00000463048 POTEJP0CG39 1038 aa24.8■■□□□ 1.56
NUP43-205ENST00000463048 SPATA5Q8NB90 893 aa24.8■■□□□ 1.56
NUP43-205ENST00000463048 WDR66Q8TBY9 1149 aa24.8■■□□□ 1.56
NUP43-205ENST00000463048 TRPM4Q8TD43 1214 aa24.8■■□□□ 1.56
NUP43-205ENST00000463048 TSHZ3Q63HK5 1081 aa24.79■■□□□ 1.56
NUP43-205ENST00000463048 TBC1D9Q6ZT07 1266 aa24.79■■□□□ 1.56
NUP43-205ENST00000463048 SMC5Q8IY18 1101 aa24.79■■□□□ 1.56
NUP43-205ENST00000463048 OTUD7AQ8TE49 926 aaPredicted RBP24.79■■□□□ 1.56
NUP43-205ENST00000463048 ADARB2Q9NS39 739 aaKnown RBP24.79■■□□□ 1.56
NUP43-205ENST00000463048 ABCF2Q9UG63 623 aa24.79■■□□□ 1.56
NUP43-205ENST00000463048 TTF2Q9UNY4 1162 aaKnown RBP24.79■■□□□ 1.56
NUP43-205ENST00000463048 CLEC11AQ9Y240 323 aa24.79■■□□□ 1.56
NUP43-205ENST00000463048 OGFOD1Q8N543 542 aa24.78■■□□□ 1.56
NUP43-205ENST00000463048 TBC1D22AQ8WUA7 517 aa24.78■■□□□ 1.56
NUP43-205ENST00000463048 LNPKQ9C0E8 428 aa24.78■■□□□ 1.56
NUP43-205ENST00000463048 ZAP70P43403 619 aa24.77■■□□□ 1.56
NUP43-205ENST00000463048 RBM5P52756 815 aaKnown RBP eCLIP24.77■■□□□ 1.56
NUP43-205ENST00000463048 FKBP1AP62942 108 aaKnown RBP24.77■■□□□ 1.56
NUP43-205ENST00000463048 HDAC9Q9UKV0 1011 aa24.77■■□□□ 1.56
NUP43-205ENST00000463048 PRDX5P30044 214 aa24.76■■□□□ 1.55
NUP43-205ENST00000463048 KIF4BQ2VIQ3 1234 aa24.76■■□□□ 1.55
NUP43-205ENST00000463048 MYOZ2Q9NPC6 264 aa24.76■■□□□ 1.55
NUP43-205ENST00000463048 PCDHAC2Q9Y5I4 1007 aa24.76■■□□□ 1.55
NUP43-205ENST00000463048 ADAMTSL1Q8N6G6 1762 aa24.75■■□□□ 1.55
NUP43-205ENST00000463048 HIRAP54198 1017 aaPredicted RBP24.75■■□□□ 1.55
NUP43-205ENST00000463048 ZNF280AP59817 542 aaPredicted RBP24.75■■□□□ 1.55
NUP43-205ENST00000463048 DNAJC2Q99543 621 aaKnown RBP24.75■■□□□ 1.55
NUP43-205ENST00000463048 BOLA2Q9H3K6 86 aa24.75■■□□□ 1.55
NUP43-205ENST00000463048 LDHBP07195 334 aaKnown RBP24.74■■□□□ 1.55
NUP43-205ENST00000463048 AKAP11Q9UKA4 1901 aa24.74■■□□□ 1.55
NUP43-205ENST00000463048 ASTN2O75129 1339 aaPredicted RBP24.73■■□□□ 1.55
NUP43-205ENST00000463048 USP50Q70EL3 339 aaPredicted RBP24.73■■□□□ 1.55
NUP43-205ENST00000463048 PNMA8AQ86V59 439 aaPredicted RBP24.73■■□□□ 1.55
NUP43-205ENST00000463048 CHD1LQ86WJ1 897 aa24.73■■□□□ 1.55
NUP43-205ENST00000463048 GPATCH3Q96I76 525 aa24.73■■□□□ 1.55
NUP43-205ENST00000463048 ZNF512BQ96KM6 892 aaPredicted RBP24.73■■□□□ 1.55
NUP43-205ENST00000463048 CYP2E1P05181 493 aaPredicted RBP24.72■■□□□ 1.55
NUP43-205ENST00000463048 NUCB1Q02818 461 aa24.72■■□□□ 1.55
NUP43-205ENST00000463048 CFAP100Q494V2 611 aa24.72■■□□□ 1.55
NUP43-205ENST00000463048 CCDC136Q96JN2 1154 aa24.72■■□□□ 1.55
NUP43-205ENST00000463048 ECHDC1Q9NTX5 307 aa24.72■■□□□ 1.55
NUP43-205ENST00000463048 RAI14Q9P0K7 980 aa24.72■■□□□ 1.55
NUP43-205ENST00000463048 PDS5AQ29RF7 1337 aaKnown RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms