RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 GNL2Q13823 731 aaKnown RBP4.08□□□□□ -1.76
COL8A1-204ENST00000462604 BMS1Q14692 1282 aaKnown RBP4.08□□□□□ -1.76
COL8A1-204ENST00000462604 ARID5BQ14865 1188 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 ELF2Q15723 593 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 IMMTQ16891 758 aaKnown RBP4.08□□□□□ -1.76
COL8A1-204ENST00000462604 GORABQ5T7V8 394 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 ADALQ6DHV7 355 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 CPLX2Q6PUV4 134 aaKnown RBP4.08□□□□□ -1.76
COL8A1-204ENST00000462604 LMBR1LQ6UX01 489 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 SYNE3Q6ZMZ3 975 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 TMC6Q7Z403 805 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 RALYLQ86SE5 291 aaKnown RBP4.08□□□□□ -1.76
COL8A1-204ENST00000462604 ANKLE2Q86XL3 938 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 HOMER1Q86YM7 354 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 FBXL16Q8N461 479 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 CARMIL3Q8ND23 1372 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 MNS1Q8NEH6 495 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 PLBD2Q8NHP8 589 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.08□□□□□ -1.76
COL8A1-204ENST00000462604 LMO7Q8WWI1 1683 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 FBXW7Q969H0 707 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 DCAF5Q96JK2 942 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 PPP1R13BQ96KQ4 1090 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 NEUROD6Q96NK8 337 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 TUBGCP6Q96RT7 1819 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 SEC62Q99442 399 aaKnown RBP4.08□□□□□ -1.76
COL8A1-204ENST00000462604 AGXT2Q9BYV1 514 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 FTOQ9C0B1 505 aaKnown RBP eCLIP4.08□□□□□ -1.76
COL8A1-204ENST00000462604 NCOA5Q9HCD5 579 aaKnown RBP4.08□□□□□ -1.76
COL8A1-204ENST00000462604 POLR3EQ9NVU0 708 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 NLRP2Q9NX02 1062 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 CWC25Q9NXE8 425 aaPredicted RBP4.08□□□□□ -1.76
COL8A1-204ENST00000462604 TRMT1Q9NXH9 659 aaKnown RBP4.08□□□□□ -1.76
COL8A1-204ENST00000462604 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.08□□□□□ -1.76
COL8A1-204ENST00000462604 IFNKQ9P0W0 207 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 KIAA1468Q9P260 1216 aa4.08□□□□□ -1.76
COL8A1-204ENST00000462604 HOOK1Q9UJC3 728 aaKnown RBP4.08□□□□□ -1.76
COL8A1-204ENST00000462604 KDM3BQ7LBC6 1761 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 ABCC6O95255 1503 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 KDM6AO15550 1401 aaPredicted RBP4.07□□□□□ -1.76
COL8A1-204ENST00000462604 ABCC12Q96J65 1359 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 ERBB3P21860 1342 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 PHLPP2Q6ZVD8 1323 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 WDR19Q8NEZ3 1342 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.07□□□□□ -1.76
COL8A1-204ENST00000462604 KLF18A0A0U1RQI7 1052 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 A0A1B0GVL5 298 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 GOLGA6L9A6NEM1 432 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 USP27XA6NNY8 438 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 ZSCAN12O43309 604 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 RAD21O60216 631 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 CIAO1O76071 339 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 SERPINC1P01008 464 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 CSB-PGBD3P0DP91 1061 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 HSPD1P10809 573 aaKnown RBP4.07□□□□□ -1.76
COL8A1-204ENST00000462604 PFKFB1P16118 471 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 CMA1P23946 247 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 NDUFA8P51970 172 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 FANCCQ00597 558 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 MYL5Q02045 173 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 TRDNQ13061 729 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 TRIM29Q14134 588 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 WASHC4Q2M389 1173 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 DPCR1Q3MIW9 517 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 KMT5BQ4FZB7 885 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 TTC39AQ5SRH9 613 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 MYSM1Q5VVJ2 828 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 ANO1Q5XXA6 986 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 FBXO38Q6PIJ6 1188 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 TMCO3Q6UWJ1 677 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 OLFM4Q6UX06 510 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 SYT10Q6XYQ8 523 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 ILDR1Q86SU0 546 aaPredicted RBP4.07□□□□□ -1.76
COL8A1-204ENST00000462604 FCHSD1Q86WN1 690 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 IFNL2Q8IZJ0 200 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 KCTD17Q8N5Z5 321 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 LINC00301Q8NCQ3 95 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 KCNV2Q8TDN2 545 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 RNF25Q96BH1 459 aaPredicted RBP4.07□□□□□ -1.76
COL8A1-204ENST00000462604 ZNF496Q96IT1 587 aaPredicted RBP4.07□□□□□ -1.76
COL8A1-204ENST00000462604 TIGD1Q96MW7 591 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 SRRTQ9BXP5 876 aaKnown RBP4.07□□□□□ -1.76
COL8A1-204ENST00000462604 XPO4Q9C0E2 1151 aaKnown RBP4.07□□□□□ -1.76
COL8A1-204ENST00000462604 L2HGDHQ9H9P8 463 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 CEP126Q9P2H0 1117 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 ORC3Q9UBD5 711 aaPredicted RBP4.07□□□□□ -1.76
COL8A1-204ENST00000462604 PCDHA7Q9UN72 937 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 MTMR7Q9Y216 660 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 AKAP2Q9Y2D5 859 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.07□□□□□ -1.76
COL8A1-204ENST00000462604 NDUFB9Q9Y6M9 179 aa4.07□□□□□ -1.76
COL8A1-204ENST00000462604 CPDO75976 1380 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 ZMYM6O95789 1325 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 A0A087WWV3 80 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 ATP5J2-PTCD1G3V325 749 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 H7C1W4 665 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 M0R2C6 588 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 EYA2O00167 538 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 BIN1O00499 593 aa4.06□□□□□ -1.76
COL8A1-204ENST00000462604 PTCD1O75127 700 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms