RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 UBE3BQ7Z3V4 1068 aa10.14□□□□□ -0.79
CDC42BPA-210ENST00000462553 CTU1Q7Z7A3 348 aaKnown RBP10.14□□□□□ -0.79
CDC42BPA-210ENST00000462553 ZBED3Q96IU2 234 aaPredicted RBP10.14□□□□□ -0.79
CDC42BPA-210ENST00000462553 PLA2G12BQ9BX93 195 aa10.14□□□□□ -0.79
CDC42BPA-210ENST00000462553 COL1A1P02452 1464 aaPredicted RBP10.14□□□□□ -0.79
CDC42BPA-210ENST00000462553 GCKRQ14397 625 aa10.13□□□□□ -0.79
CDC42BPA-210ENST00000462553 TWISTNBQ3B726 338 aaPredicted RBP10.13□□□□□ -0.79
CDC42BPA-210ENST00000462553 COA1Q9GZY4 146 aa10.13□□□□□ -0.79
CDC42BPA-210ENST00000462553 ZNF804BA4D1E1 1349 aa10.12□□□□□ -0.79
CDC42BPA-210ENST00000462553 VAMP4O75379 141 aa10.12□□□□□ -0.79
CDC42BPA-210ENST00000462553 CSF1RP07333 972 aa10.12□□□□□ -0.79
CDC42BPA-210ENST00000462553 ITGA6P23229 1130 aa10.12□□□□□ -0.79
CDC42BPA-210ENST00000462553 EXOSC9Q06265 439 aaKnown RBP10.12□□□□□ -0.79
CDC42BPA-210ENST00000462553 NEXNQ0ZGT2 675 aa10.12□□□□□ -0.79
CDC42BPA-210ENST00000462553 STK31Q9BXU1 1019 aa10.12□□□□□ -0.79
CDC42BPA-210ENST00000462553 LEMD3Q9Y2U8 911 aa10.12□□□□□ -0.79
CDC42BPA-210ENST00000462553 FARP1Q9Y4F1 1045 aaPredicted RBP10.12□□□□□ -0.79
CDC42BPA-210ENST00000462553 CEP290O15078 2479 aa10.12□□□□□ -0.79
CDC42BPA-210ENST00000462553 MYH13Q9UKX3 1938 aa10.11□□□□□ -0.79
CDC42BPA-210ENST00000462553 SNAP23O00161 211 aa10.11□□□□□ -0.79
CDC42BPA-210ENST00000462553 TM4SF4P48230 202 aa10.11□□□□□ -0.79
CDC42BPA-210ENST00000462553 FLIIQ13045 1269 aa10.11□□□□□ -0.79
CDC42BPA-210ENST00000462553 KIAA0825Q8IV33 1275 aa10.11□□□□□ -0.79
CDC42BPA-210ENST00000462553 CERS5Q8N5B7 392 aa10.11□□□□□ -0.79
CDC42BPA-210ENST00000462553 ZNF296Q8WUU4 475 aaPredicted RBP10.11□□□□□ -0.79
CDC42BPA-210ENST00000462553 FBXW7Q969H0 707 aa10.11□□□□□ -0.79
CDC42BPA-210ENST00000462553 CHMP4AQ9BY43 222 aa10.11□□□□□ -0.79
CDC42BPA-210ENST00000462553 HPS5Q9UPZ3 1129 aa10.11□□□□□ -0.79
CDC42BPA-210ENST00000462553 AOX1Q06278 1338 aa10.1□□□□□ -0.79
CDC42BPA-210ENST00000462553 TBC1D8O95759 1140 aa10.1□□□□□ -0.79
CDC42BPA-210ENST00000462553 IGHMBP2P38935 993 aaKnown RBP10.1□□□□□ -0.79
CDC42BPA-210ENST00000462553 PTPN12Q05209 780 aaKnown RBP10.1□□□□□ -0.79
CDC42BPA-210ENST00000462553 CHRNDQ07001 517 aa10.1□□□□□ -0.79
CDC42BPA-210ENST00000462553 MKRN3Q13064 507 aaKnown RBP10.1□□□□□ -0.79
CDC42BPA-210ENST00000462553 NOM1Q5C9Z4 860 aaKnown RBP10.1□□□□□ -0.79
CDC42BPA-210ENST00000462553 LDLRAD1Q5T700 205 aa10.1□□□□□ -0.79
CDC42BPA-210ENST00000462553 TTLL5Q6EMB2 1281 aa10.1□□□□□ -0.79
CDC42BPA-210ENST00000462553 APOBEC3FQ8IUX4 373 aaKnown RBP10.1□□□□□ -0.79
CDC42BPA-210ENST00000462553 OGFOD1Q8N543 542 aa10.1□□□□□ -0.79
CDC42BPA-210ENST00000462553 DNAAF4Q8WXU2 420 aa10.1□□□□□ -0.79
CDC42BPA-210ENST00000462553 CFHR5Q9BXR6 569 aa10.1□□□□□ -0.79
CDC42BPA-210ENST00000462553 R3HDMLQ9H3Y0 253 aa10.1□□□□□ -0.79
CDC42BPA-210ENST00000462553 FZD1Q9UP38 647 aa10.1□□□□□ -0.79
CDC42BPA-210ENST00000462553 PCDHAC2Q9Y5I4 1007 aa10.1□□□□□ -0.79
CDC42BPA-210ENST00000462553 GPR25O00155 361 aa10.09□□□□□ -0.79
CDC42BPA-210ENST00000462553 MMP14P50281 582 aa10.09□□□□□ -0.79
CDC42BPA-210ENST00000462553 GTF2IP78347 998 aa10.09□□□□□ -0.79
CDC42BPA-210ENST00000462553 SLFN5Q08AF3 891 aa10.09□□□□□ -0.79
CDC42BPA-210ENST00000462553 TTLL12Q14166 644 aaPredicted RBP10.09□□□□□ -0.79
CDC42BPA-210ENST00000462553 C15orf52Q6ZUT6 534 aaKnown RBP10.09□□□□□ -0.79
CDC42BPA-210ENST00000462553 LINS1Q8NG48 757 aa10.09□□□□□ -0.79
CDC42BPA-210ENST00000462553 DCBLD2Q96PD2 775 aa10.09□□□□□ -0.79
CDC42BPA-210ENST00000462553 ANKRD2Q9GZV1 360 aa10.09□□□□□ -0.79
CDC42BPA-210ENST00000462553 MYH16Q9H6N6 1097 aa10.09□□□□□ -0.79
CDC42BPA-210ENST00000462553 CD209Q9NNX6 404 aa10.09□□□□□ -0.79
CDC42BPA-210ENST00000462553 ZSWIM8A7E2V4 1837 aa10.09□□□□□ -0.79
CDC42BPA-210ENST00000462553 RANBP2P49792 3224 aaKnown RBP10.08□□□□□ -0.8
CDC42BPA-210ENST00000462553 E9PSI1 815 aa10.08□□□□□ -0.8
CDC42BPA-210ENST00000462553 NF2P35240 595 aa10.08□□□□□ -0.8
CDC42BPA-210ENST00000462553 FOXO4P98177 505 aa10.08□□□□□ -0.8
CDC42BPA-210ENST00000462553 FKBP5Q13451 457 aaPredicted RBP10.08□□□□□ -0.8
CDC42BPA-210ENST00000462553 PRKG1Q13976 671 aa10.08□□□□□ -0.8
CDC42BPA-210ENST00000462553 MAP3K11Q16584 847 aa10.08□□□□□ -0.8
CDC42BPA-210ENST00000462553 SPRYD7Q5W111 196 aa10.08□□□□□ -0.8
CDC42BPA-210ENST00000462553 TRMT2AQ8IZ69 625 aaKnown RBP10.08□□□□□ -0.8
CDC42BPA-210ENST00000462553 MTMR14Q8NCE2 650 aa10.08□□□□□ -0.8
CDC42BPA-210ENST00000462553 CDCA7LQ96GN5 454 aa10.08□□□□□ -0.8
CDC42BPA-210ENST00000462553 MPHOSPH8Q99549 860 aa10.08□□□□□ -0.8
CDC42BPA-210ENST00000462553 TAF5LO75529 589 aa10.07□□□□□ -0.8
CDC42BPA-210ENST00000462553 IL1R1P14778 569 aa10.07□□□□□ -0.8
CDC42BPA-210ENST00000462553 SREBF2Q12772 1141 aa10.07□□□□□ -0.8
CDC42BPA-210ENST00000462553 PKN2Q16513 984 aaKnown RBP10.07□□□□□ -0.8
CDC42BPA-210ENST00000462553 EPHA10Q5JZY3 1008 aa10.07□□□□□ -0.8
CDC42BPA-210ENST00000462553 ARMC9Q7Z3E5 817 aa10.07□□□□□ -0.8
CDC42BPA-210ENST00000462553 HELBQ8NG08 1087 aaPredicted RBP10.07□□□□□ -0.8
CDC42BPA-210ENST00000462553 CLMNQ96JQ2 1002 aa10.07□□□□□ -0.8
CDC42BPA-210ENST00000462553 DEFB129Q9H1M3 183 aa10.07□□□□□ -0.8
CDC42BPA-210ENST00000462553 HDAC9Q9UKV0 1011 aa10.07□□□□□ -0.8
CDC42BPA-210ENST00000462553 ANGEL1Q9UNK9 670 aaKnown RBP10.07□□□□□ -0.8
CDC42BPA-210ENST00000462553 SZT2Q5T011 3432 aa10.07□□□□□ -0.8
CDC42BPA-210ENST00000462553 ANKRD18BA2A2Z9 1011 aa10.06□□□□□ -0.8
CDC42BPA-210ENST00000462553 F6X3S4 739 aa10.06□□□□□ -0.8
CDC42BPA-210ENST00000462553 IGF2BP3O00425 579 aaKnown RBP eCLIP10.06□□□□□ -0.8
CDC42BPA-210ENST00000462553 KCNJ4P48050 445 aa10.06□□□□□ -0.8
CDC42BPA-210ENST00000462553 BEND3Q5T5X7 828 aa10.06□□□□□ -0.8
CDC42BPA-210ENST00000462553 PRPF38BQ5VTL8 546 aaKnown RBP10.06□□□□□ -0.8
CDC42BPA-210ENST00000462553 FBXO46Q6PJ61 603 aaPredicted RBP10.06□□□□□ -0.8
CDC42BPA-210ENST00000462553 WNK4Q96J92 1243 aa10.06□□□□□ -0.8
CDC42BPA-210ENST00000462553 CLRN2A0PK11 232 aa10.05□□□□□ -0.8
CDC42BPA-210ENST00000462553 FKTNO75072 461 aa10.05□□□□□ -0.8
CDC42BPA-210ENST00000462553 GJA5P36382 358 aa10.05□□□□□ -0.8
CDC42BPA-210ENST00000462553 FKBP1AP62942 108 aaKnown RBP10.05□□□□□ -0.8
CDC42BPA-210ENST00000462553 DLGAP5Q15398 846 aa10.05□□□□□ -0.8
CDC42BPA-210ENST00000462553 CFAP100Q494V2 611 aa10.05□□□□□ -0.8
CDC42BPA-210ENST00000462553 ZNF594Q96JF6 807 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPA-210ENST00000462553 JAG2Q9Y219 1238 aa10.05□□□□□ -0.8
CDC42BPA-210ENST00000462553 PPP2R3BQ9Y5P8 575 aa10.05□□□□□ -0.8
CDC42BPA-210ENST00000462553 MANSC4A6NHS7 340 aaPredicted RBP10.04□□□□□ -0.8
CDC42BPA-210ENST00000462553 F8W031 263 aaPredicted RBP10.04□□□□□ -0.8
CDC42BPA-210ENST00000462553 ZBTB48P10074 688 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms