RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 MTMR14Q8NCE2 650 aa19.44■□□□□ 0.7
SKA3-204ENST00000462482 ZBED3Q96IU2 234 aaPredicted RBP19.44■□□□□ 0.7
SKA3-204ENST00000462482 SPINK5Q9NQ38 1064 aaPredicted RBP19.44■□□□□ 0.7
SKA3-204ENST00000462482 TM4SF4P48230 202 aa19.43■□□□□ 0.7
SKA3-204ENST00000462482 PTPN12Q05209 780 aaKnown RBP19.43■□□□□ 0.7
SKA3-204ENST00000462482 PKN2Q16513 984 aaKnown RBP19.43■□□□□ 0.7
SKA3-204ENST00000462482 SUPT20HL1Q3ZLR7 823 aa19.43■□□□□ 0.7
SKA3-204ENST00000462482 CFAP100Q494V2 611 aa19.43■□□□□ 0.7
SKA3-204ENST00000462482 SLC10A4Q96EP9 437 aa19.43■□□□□ 0.7
SKA3-204ENST00000462482 ZNF594Q96JF6 807 aaPredicted RBP19.43■□□□□ 0.7
SKA3-204ENST00000462482 COL1A1P02452 1464 aaPredicted RBP19.42■□□□□ 0.7
SKA3-204ENST00000462482 TBC1D8O95759 1140 aa19.42■□□□□ 0.7
SKA3-204ENST00000462482 EPHA10Q5JZY3 1008 aa19.42■□□□□ 0.7
SKA3-204ENST00000462482 CERS5Q8N5B7 392 aa19.42■□□□□ 0.7
SKA3-204ENST00000462482 VEZTQ9HBM0 779 aa19.42■□□□□ 0.7
SKA3-204ENST00000462482 PSME4Q14997 1843 aa19.41■□□□□ 0.7
SKA3-204ENST00000462482 SPDYE2BA6NHP3 402 aa19.41■□□□□ 0.7
SKA3-204ENST00000462482 ALDH1A1P00352 501 aa19.41■□□□□ 0.7
SKA3-204ENST00000462482 SPDYE6P0CI01 402 aa19.41■□□□□ 0.7
SKA3-204ENST00000462482 UBE4AQ14139 1066 aa19.41■□□□□ 0.7
SKA3-204ENST00000462482 LDLRAD1Q5T700 205 aa19.41■□□□□ 0.7
SKA3-204ENST00000462482 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.41■□□□□ 0.7
SKA3-204ENST00000462482 IRS2Q9Y4H2 1338 aa19.41■□□□□ 0.7
SKA3-204ENST00000462482 MYH3P11055 1940 aa19.41■□□□□ 0.7
SKA3-204ENST00000462482 CLRN2A0PK11 232 aa19.4■□□□□ 0.7
SKA3-204ENST00000462482 HIBADHP31937 336 aaKnown RBP19.4■□□□□ 0.7
SKA3-204ENST00000462482 INHBEP58166 350 aa19.4■□□□□ 0.7
SKA3-204ENST00000462482 VPS37DQ86XT2 251 aa19.4■□□□□ 0.7
SKA3-204ENST00000462482 ZNF296Q8WUU4 475 aaPredicted RBP19.4■□□□□ 0.7
SKA3-204ENST00000462482 JAG2Q9Y219 1238 aa19.4■□□□□ 0.7
SKA3-204ENST00000462482 MANSC4A6NHS7 340 aaPredicted RBP19.39■□□□□ 0.69
SKA3-204ENST00000462482 UNCXA6NJT0 531 aa19.39■□□□□ 0.69
SKA3-204ENST00000462482 IREB2P48200 963 aaKnown RBP19.39■□□□□ 0.69
SKA3-204ENST00000462482 TNFAIP1Q13829 316 aa19.39■□□□□ 0.69
SKA3-204ENST00000462482 SPRYD7Q5W111 196 aa19.39■□□□□ 0.69
SKA3-204ENST00000462482 SPEF2Q9C093 1822 aa19.39■□□□□ 0.69
SKA3-204ENST00000462482 POLR2AP24928 1970 aaKnown RBP19.39■□□□□ 0.69
SKA3-204ENST00000462482 CASP8AP2Q9UKL3 1982 aa19.39■□□□□ 0.69
SKA3-204ENST00000462482 GPR25O00155 361 aa19.38■□□□□ 0.69
SKA3-204ENST00000462482 NOM1Q5C9Z4 860 aaKnown RBP19.38■□□□□ 0.69
SKA3-204ENST00000462482 MFSD14BQ5SR56 506 aa19.38■□□□□ 0.69
SKA3-204ENST00000462482 MROH5Q6ZUA9 1318 aa19.38■□□□□ 0.69
SKA3-204ENST00000462482 SUCLG2Q96I99 432 aa19.38■□□□□ 0.69
SKA3-204ENST00000462482 PRMT6Q96LA8 375 aaPredicted RBP19.38■□□□□ 0.69
SKA3-204ENST00000462482 FAM205AQ6ZU69 1335 aa19.37■□□□□ 0.69
SKA3-204ENST00000462482 FKTNO75072 461 aa19.37■□□□□ 0.69
SKA3-204ENST00000462482 FRAT2O75474 233 aaPredicted RBP19.37■□□□□ 0.69
SKA3-204ENST00000462482 SOX10P56693 466 aa19.37■□□□□ 0.69
SKA3-204ENST00000462482 MAP3K11Q16584 847 aa19.37■□□□□ 0.69
SKA3-204ENST00000462482 TTF2Q9UNY4 1162 aaKnown RBP19.37■□□□□ 0.69
SKA3-204ENST00000462482 ZBTB48P10074 688 aaPredicted RBP19.36■□□□□ 0.69
SKA3-204ENST00000462482 GYG1P46976 350 aa19.36■□□□□ 0.69
SKA3-204ENST00000462482 RASA3Q14644 834 aa19.36■□□□□ 0.69
SKA3-204ENST00000462482 CAVIN4Q5BKX8 364 aa19.36■□□□□ 0.69
SKA3-204ENST00000462482 TDRD7Q8NHU6 1098 aaKnown RBP19.36■□□□□ 0.69
SKA3-204ENST00000462482 SERPINA10Q9UK55 444 aa19.36■□□□□ 0.69
SKA3-204ENST00000462482 HPS5Q9UPZ3 1129 aa19.36■□□□□ 0.69
SKA3-204ENST00000462482 PTPRCP08575 1304 aa19.35■□□□□ 0.69
SKA3-204ENST00000462482 NBPF7P0C2Y1 421 aaPredicted RBP19.35■□□□□ 0.69
SKA3-204ENST00000462482 METTL24Q5JXM2 366 aa19.35■□□□□ 0.69
SKA3-204ENST00000462482 OTUD7BQ6GQQ9 843 aa19.35■□□□□ 0.69
SKA3-204ENST00000462482 CFHR5Q9BXR6 569 aa19.35■□□□□ 0.69
SKA3-204ENST00000462482 PUS3Q9BZE2 481 aaKnown RBP19.35■□□□□ 0.69
SKA3-204ENST00000462482 FZD1Q9UP38 647 aa19.35■□□□□ 0.69
SKA3-204ENST00000462482 PCDHAC2Q9Y5I4 1007 aa19.35■□□□□ 0.69
SKA3-204ENST00000462482 TNNI2P48788 182 aa19.34■□□□□ 0.69
SKA3-204ENST00000462482 NBPF12Q5TAG4 269 aaPredicted RBP19.34■□□□□ 0.69
SKA3-204ENST00000462482 WNK4Q96J92 1243 aa19.34■□□□□ 0.69
SKA3-204ENST00000462482 FAM84BQ96KN1 310 aaPredicted RBP19.34■□□□□ 0.69
SKA3-204ENST00000462482 BICC1Q9H694 974 aaKnown RBP19.34■□□□□ 0.69
SKA3-204ENST00000462482 UTYO14607 1347 aa19.33■□□□□ 0.69
SKA3-204ENST00000462482 E9PSI1 815 aa19.33■□□□□ 0.68
SKA3-204ENST00000462482 ANKRD13AQ8IZ07 590 aa19.33■□□□□ 0.68
SKA3-204ENST00000462482 MRPL50Q8N5N7 158 aaKnown RBP19.33■□□□□ 0.68
SKA3-204ENST00000462482 TBC1D22AQ8WUA7 517 aa19.33■□□□□ 0.68
SKA3-204ENST00000462482 ZNF70Q9UC06 446 aaPredicted RBP19.33■□□□□ 0.68
SKA3-204ENST00000462482 RIPOR2Q9Y4F9 1068 aa19.33■□□□□ 0.68
SKA3-204ENST00000462482 CHAF1AQ13111 956 aaPredicted RBP19.32■□□□□ 0.68
SKA3-204ENST00000462482 RABL6Q3YEC7 729 aaPredicted RBP19.32■□□□□ 0.68
SKA3-204ENST00000462482 SPDYE2Q495Y8 402 aa19.32■□□□□ 0.68
SKA3-204ENST00000462482 FBXO46Q6PJ61 603 aaPredicted RBP19.32■□□□□ 0.68
SKA3-204ENST00000462482 IFNL1Q8IU54 200 aa19.32■□□□□ 0.68
SKA3-204ENST00000462482 CLMNQ96JQ2 1002 aa19.32■□□□□ 0.68
SKA3-204ENST00000462482 TDRD3Q9H7E2 651 aaKnown RBP19.32■□□□□ 0.68
SKA3-204ENST00000462482 DZIP1LQ8IYY4 767 aaKnown RBP19.31■□□□□ 0.68
SKA3-204ENST00000462482 KAZALD1Q96I82 304 aa19.31■□□□□ 0.68
SKA3-204ENST00000462482 AKAP11Q9UKA4 1901 aa19.31■□□□□ 0.68
SKA3-204ENST00000462482 ZNF521Q96K83 1311 aa19.3■□□□□ 0.68
SKA3-204ENST00000462482 USP2O75604 605 aaPredicted RBP19.3■□□□□ 0.68
SKA3-204ENST00000462482 IFIT1P09914 478 aaKnown RBP19.3■□□□□ 0.68
SKA3-204ENST00000462482 CRKP46108 304 aa19.3■□□□□ 0.68
SKA3-204ENST00000462482 FBXO33Q7Z6M2 555 aa19.3■□□□□ 0.68
SKA3-204ENST00000462482 TMOD2Q9NZR1 351 aa19.3■□□□□ 0.68
SKA3-204ENST00000462482 CACNA1FO60840 1977 aa19.3■□□□□ 0.68
SKA3-204ENST00000462482 TCP10L2B9ZVM9 353 aa19.29■□□□□ 0.68
SKA3-204ENST00000462482 PDE8BO95263 885 aa19.29■□□□□ 0.68
SKA3-204ENST00000462482 HDLBPQ00341 1268 aaKnown RBP19.29■□□□□ 0.68
SKA3-204ENST00000462482 LRRC24Q50LG9 513 aa19.29■□□□□ 0.68
SKA3-204ENST00000462482 TEKT1Q969V4 418 aa19.29■□□□□ 0.68
SKA3-204ENST00000462482 IQSEC3Q9UPP2 1182 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms