RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 TRIM27P14373 513 aa11.08□□□□□ -0.64
DDX39B-216ENST00000462421 IL1R1P14778 569 aa11.08□□□□□ -0.64
DDX39B-216ENST00000462421 TNNI2P48788 182 aa11.08□□□□□ -0.64
DDX39B-216ENST00000462421 HUNKP57058 714 aa11.08□□□□□ -0.64
DDX39B-216ENST00000462421 ATP2B3Q16720 1220 aa11.08□□□□□ -0.64
DDX39B-216ENST00000462421 MFSD14BQ5SR56 506 aa11.08□□□□□ -0.64
DDX39B-216ENST00000462421 ZGPATQ8N5A5 531 aaKnown RBP11.08□□□□□ -0.64
DDX39B-216ENST00000462421 ANKRD44Q8N8A2 993 aa11.08□□□□□ -0.64
DDX39B-216ENST00000462421 GBA2Q9HCG7 927 aaPredicted RBP11.08□□□□□ -0.64
DDX39B-216ENST00000462421 TAF1P21675 1872 aa11.08□□□□□ -0.64
DDX39B-216ENST00000462421 ZNF609O15014 1411 aa11.08□□□□□ -0.64
DDX39B-216ENST00000462421 SPEF2Q9C093 1822 aa11.07□□□□□ -0.64
DDX39B-216ENST00000462421 RASSF10A6NK89 507 aa11.07□□□□□ -0.64
DDX39B-216ENST00000462421 KLRK1P26718 216 aa11.07□□□□□ -0.64
DDX39B-216ENST00000462421 GYG1P46976 350 aa11.07□□□□□ -0.64
DDX39B-216ENST00000462421 LRRC24Q50LG9 513 aa11.07□□□□□ -0.64
DDX39B-216ENST00000462421 ARMC9Q7Z3E5 817 aa11.07□□□□□ -0.64
DDX39B-216ENST00000462421 WDR66Q8TBY9 1149 aa11.07□□□□□ -0.64
DDX39B-216ENST00000462421 CCDC102AQ96A19 550 aa11.07□□□□□ -0.64
DDX39B-216ENST00000462421 CAPNS2Q96L46 248 aa11.07□□□□□ -0.64
DDX39B-216ENST00000462421 MEIS3Q99687 375 aa11.07□□□□□ -0.64
DDX39B-216ENST00000462421 PUS3Q9BZE2 481 aaKnown RBP11.07□□□□□ -0.64
DDX39B-216ENST00000462421 VEZTQ9HBM0 779 aa11.07□□□□□ -0.64
DDX39B-216ENST00000462421 PGAP2Q9UHJ9 254 aa11.07□□□□□ -0.64
DDX39B-216ENST00000462421 TTF2Q9UNY4 1162 aaKnown RBP11.07□□□□□ -0.64
DDX39B-216ENST00000462421 RIPOR2Q9Y4F9 1068 aa11.07□□□□□ -0.64
DDX39B-216ENST00000462421 TLL2Q9Y6L7 1015 aa11.07□□□□□ -0.64
DDX39B-216ENST00000462421 SHTN1A0MZ66 631 aa11.06□□□□□ -0.64
DDX39B-216ENST00000462421 HSPA1AP0DMV8 641 aaKnown RBP11.06□□□□□ -0.64
DDX39B-216ENST00000462421 HSPA1BP0DMV9 641 aaKnown RBP11.06□□□□□ -0.64
DDX39B-216ENST00000462421 FKBP1BP68106 108 aa11.06□□□□□ -0.64
DDX39B-216ENST00000462421 TXNRD3Q86VQ6 643 aa11.06□□□□□ -0.64
DDX39B-216ENST00000462421 SLF2Q8IX21 1173 aa11.06□□□□□ -0.64
DDX39B-216ENST00000462421 DNAJC5GQ8N7S2 189 aa11.06□□□□□ -0.64
DDX39B-216ENST00000462421 JMYQ8N9B5 988 aa11.06□□□□□ -0.64
DDX39B-216ENST00000462421 KLHDC4Q8TBB5 520 aa11.06□□□□□ -0.64
DDX39B-216ENST00000462421 HOOK2Q96ED9 719 aa11.06□□□□□ -0.64
DDX39B-216ENST00000462421 HHIPL1Q96JK4 782 aa11.06□□□□□ -0.64
DDX39B-216ENST00000462421 JAG2Q9Y219 1238 aa11.06□□□□□ -0.64
DDX39B-216ENST00000462421 WDR33Q9C0J8 1336 aaKnown RBP11.06□□□□□ -0.64
DDX39B-216ENST00000462421 ADM5C9JUS6 153 aa11.05□□□□□ -0.64
DDX39B-216ENST00000462421 PPP1R12BO60237 982 aaPredicted RBP11.05□□□□□ -0.64
DDX39B-216ENST00000462421 HMMRO75330 724 aa11.05□□□□□ -0.64
DDX39B-216ENST00000462421 VEGFBP49765 207 aa11.05□□□□□ -0.64
DDX39B-216ENST00000462421 ZNF157P51786 506 aaPredicted RBP11.05□□□□□ -0.64
DDX39B-216ENST00000462421 HIRAP54198 1017 aaPredicted RBP11.05□□□□□ -0.64
DDX39B-216ENST00000462421 NOGQ13253 232 aa11.05□□□□□ -0.64
DDX39B-216ENST00000462421 MVPQ14764 893 aaKnown RBP11.05□□□□□ -0.64
DDX39B-216ENST00000462421 LTBP1Q14766 1721 aa11.05□□□□□ -0.64
DDX39B-216ENST00000462421 SUPT20HL1Q3ZLR7 823 aa11.05□□□□□ -0.64
DDX39B-216ENST00000462421 CFAP100Q494V2 611 aa11.05□□□□□ -0.64
DDX39B-216ENST00000462421 TMEM57Q8N5G2 664 aa11.05□□□□□ -0.64
DDX39B-216ENST00000462421 TEKT1Q969V4 418 aa11.05□□□□□ -0.64
DDX39B-216ENST00000462421 CDCA5Q96FF9 252 aa11.05□□□□□ -0.64
DDX39B-216ENST00000462421 KAZALD1Q96I82 304 aa11.05□□□□□ -0.64
DDX39B-216ENST00000462421 NEUROD6Q96NK8 337 aa11.05□□□□□ -0.64
DDX39B-216ENST00000462421 MXD3Q9BW11 206 aa11.05□□□□□ -0.64
DDX39B-216ENST00000462421 DENND2AQ9ULE3 1009 aa11.05□□□□□ -0.64
DDX39B-216ENST00000462421 SUGT1Q9Y2Z0 365 aa11.05□□□□□ -0.64
DDX39B-216ENST00000462421 PPP2R3BQ9Y5P8 575 aa11.05□□□□□ -0.64
DDX39B-216ENST00000462421 SNAP23O00161 211 aa11.04□□□□□ -0.64
DDX39B-216ENST00000462421 WNT10BO00744 389 aa11.04□□□□□ -0.64
DDX39B-216ENST00000462421 SEMA3EO15041 775 aa11.04□□□□□ -0.64
DDX39B-216ENST00000462421 CA12O43570 354 aa11.04□□□□□ -0.64
DDX39B-216ENST00000462421 MAP2K2P36507 400 aa11.04□□□□□ -0.64
DDX39B-216ENST00000462421 CTCFP49711 727 aaPredicted RBP11.04□□□□□ -0.64
DDX39B-216ENST00000462421 PTPN12Q05209 780 aaKnown RBP11.04□□□□□ -0.64
DDX39B-216ENST00000462421 HSP90AB4PQ58FF6 505 aa11.04□□□□□ -0.64
DDX39B-216ENST00000462421 SPTY2D1Q68D10 685 aaPredicted RBP11.04□□□□□ -0.64
DDX39B-216ENST00000462421 CYP4F22Q6NT55 531 aa11.04□□□□□ -0.64
DDX39B-216ENST00000462421 SAPCD2Q86UD0 394 aa11.04□□□□□ -0.64
DDX39B-216ENST00000462421 DZIP1Q86YF9 867 aaKnown RBP11.04□□□□□ -0.64
DDX39B-216ENST00000462421 TDRD7Q8NHU6 1098 aaKnown RBP11.04□□□□□ -0.64
DDX39B-216ENST00000462421 CNKSR2Q8WXI2 1034 aa11.04□□□□□ -0.64
DDX39B-216ENST00000462421 FAM84BQ96KN1 310 aaPredicted RBP11.04□□□□□ -0.64
DDX39B-216ENST00000462421 GMLQ99445 158 aa11.04□□□□□ -0.64
DDX39B-216ENST00000462421 NOL10Q9BSC4 688 aaKnown RBP11.04□□□□□ -0.64
DDX39B-216ENST00000462421 SERPINA10Q9UK55 444 aa11.04□□□□□ -0.64
DDX39B-216ENST00000462421 RCAN3Q9UKA8 241 aa11.04□□□□□ -0.64
DDX39B-216ENST00000462421 DDX19BQ9UMR2 479 aa11.04□□□□□ -0.64
DDX39B-216ENST00000462421 IQSEC3Q9UPP2 1182 aaPredicted RBP11.04□□□□□ -0.64
DDX39B-216ENST00000462421 COL4A1P02462 1669 aa11.04□□□□□ -0.64
DDX39B-216ENST00000462421 LDHBP07195 334 aaKnown RBP11.03□□□□□ -0.64
DDX39B-216ENST00000462421 NBPF9Q3BBW0 867 aa11.03□□□□□ -0.64
DDX39B-216ENST00000462421 RGMBQ6NW40 437 aa11.03□□□□□ -0.64
DDX39B-216ENST00000462421 ERC1Q8IUD2 1116 aa11.03□□□□□ -0.64
DDX39B-216ENST00000462421 REM2Q8IYK8 340 aaPredicted RBP11.03□□□□□ -0.64
DDX39B-216ENST00000462421 COPRSQ9NQ92 184 aa11.03□□□□□ -0.64
DDX39B-216ENST00000462421 COL1A1P02452 1464 aaPredicted RBP11.03□□□□□ -0.64
DDX39B-216ENST00000462421 FAM205AQ6ZU69 1335 aa11.03□□□□□ -0.64
DDX39B-216ENST00000462421 ADAMTSL1Q8N6G6 1762 aa11.03□□□□□ -0.64
DDX39B-216ENST00000462421 CLRN2A0PK11 232 aa11.02□□□□□ -0.65
DDX39B-216ENST00000462421 WTIPA6NIX2 430 aaPredicted RBP11.02□□□□□ -0.65
DDX39B-216ENST00000462421 EGFRP00533 1210 aa11.02□□□□□ -0.65
DDX39B-216ENST00000462421 CRKP46108 304 aa11.02□□□□□ -0.65
DDX39B-216ENST00000462421 IREB2P48200 963 aaKnown RBP11.02□□□□□ -0.65
DDX39B-216ENST00000462421 BCAMP50895 628 aa11.02□□□□□ -0.65
DDX39B-216ENST00000462421 CCDC158Q5M9N0 1113 aa11.02□□□□□ -0.65
DDX39B-216ENST00000462421 FBXO33Q7Z6M2 555 aa11.02□□□□□ -0.65
DDX39B-216ENST00000462421 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms