RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 KIF4BQ2VIQ3 1234 aa19.66■□□□□ 0.74
ERCC3-206ENST00000462306 VPS37DQ86XT2 251 aa19.66■□□□□ 0.74
ERCC3-206ENST00000462306 JAG2Q9Y219 1238 aa19.66■□□□□ 0.74
ERCC3-206ENST00000462306 G3BP1Q13283 466 aaKnown RBP eCLIP19.65■□□□□ 0.74
ERCC3-206ENST00000462306 MYOZ2Q9NPC6 264 aa19.65■□□□□ 0.74
ERCC3-206ENST00000462306 IQSEC3Q9UPP2 1182 aaPredicted RBP19.65■□□□□ 0.74
ERCC3-206ENST00000462306 KIAA0825Q8IV33 1275 aa19.64■□□□□ 0.73
ERCC3-206ENST00000462306 NOP58Q9Y2X3 529 aaKnown RBP19.64■□□□□ 0.73
ERCC3-206ENST00000462306 MMP14P50281 582 aa19.63■□□□□ 0.73
ERCC3-206ENST00000462306 TIMM10P62072 90 aa19.63■□□□□ 0.73
ERCC3-206ENST00000462306 HTRA3P83110 453 aa19.63■□□□□ 0.73
ERCC3-206ENST00000462306 OGFOD1Q8N543 542 aa19.63■□□□□ 0.73
ERCC3-206ENST00000462306 CHMP4BQ9H444 224 aaKnown RBP19.63■□□□□ 0.73
ERCC3-206ENST00000462306 ASTN2O75129 1339 aaPredicted RBP19.62■□□□□ 0.73
ERCC3-206ENST00000462306 SURF6O75683 361 aaKnown RBP19.62■□□□□ 0.73
ERCC3-206ENST00000462306 ADORA1P30542 326 aa19.62■□□□□ 0.73
ERCC3-206ENST00000462306 RRP1P56182 461 aaKnown RBP19.62■□□□□ 0.73
ERCC3-206ENST00000462306 FMR1Q06787 632 aaKnown RBP eCLIP19.62■□□□□ 0.73
ERCC3-206ENST00000462306 AKAP2Q9Y2D5 859 aa19.62■□□□□ 0.73
ERCC3-206ENST00000462306 A0A1B0GUL7 405 aa19.61■□□□□ 0.73
ERCC3-206ENST00000462306 TRAF5O00463 557 aa19.61■□□□□ 0.73
ERCC3-206ENST00000462306 SCARF1Q14162 830 aa19.61■□□□□ 0.73
ERCC3-206ENST00000462306 MFSD14BQ5SR56 506 aa19.61■□□□□ 0.73
ERCC3-206ENST00000462306 SIRT2Q8IXJ6 389 aa19.61■□□□□ 0.73
ERCC3-206ENST00000462306 RPAP2Q8IXW5 612 aaPredicted RBP19.61■□□□□ 0.73
ERCC3-206ENST00000462306 GLIS2Q9BZE0 524 aaPredicted RBP19.61■□□□□ 0.73
ERCC3-206ENST00000462306 HDAC9Q9UKV0 1011 aa19.61■□□□□ 0.73
ERCC3-206ENST00000462306 ARAP2Q8WZ64 1704 aa19.61■□□□□ 0.73
ERCC3-206ENST00000462306 FRAT2O75474 233 aaPredicted RBP19.6■□□□□ 0.73
ERCC3-206ENST00000462306 PHKA1P46020 1223 aa19.6■□□□□ 0.73
ERCC3-206ENST00000462306 CHAF1AQ13111 956 aaPredicted RBP19.6■□□□□ 0.73
ERCC3-206ENST00000462306 CDC37L1Q7L3B6 337 aa19.6■□□□□ 0.73
ERCC3-206ENST00000462306 ZBED3Q96IU2 234 aaPredicted RBP19.6■□□□□ 0.73
ERCC3-206ENST00000462306 F8W031 263 aaPredicted RBP19.59■□□□□ 0.73
ERCC3-206ENST00000462306 WNT10BO00744 389 aa19.59■□□□□ 0.73
ERCC3-206ENST00000462306 ZBTB22O15209 634 aa19.59■□□□□ 0.73
ERCC3-206ENST00000462306 GRIK5Q16478 980 aa19.59■□□□□ 0.73
ERCC3-206ENST00000462306 NBPF9Q3BBW0 867 aa19.59■□□□□ 0.73
ERCC3-206ENST00000462306 CCDC102BQ68D86 513 aa19.59■□□□□ 0.73
ERCC3-206ENST00000462306 XAGE2Q96GT9 111 aa19.59■□□□□ 0.73
ERCC3-206ENST00000462306 GGA3Q9NZ52 723 aa19.59■□□□□ 0.73
ERCC3-206ENST00000462306 COL1A1P02452 1464 aaPredicted RBP19.59■□□□□ 0.73
ERCC3-206ENST00000462306 OS9Q13438 667 aaPredicted RBP19.58■□□□□ 0.72
ERCC3-206ENST00000462306 ANGEL2Q5VTE6 544 aaKnown RBP19.58■□□□□ 0.72
ERCC3-206ENST00000462306 USP48Q86UV5 1035 aa19.58■□□□□ 0.72
ERCC3-206ENST00000462306 DNAJC5GQ8N7S2 189 aa19.58■□□□□ 0.72
ERCC3-206ENST00000462306 MTMR14Q8NCE2 650 aa19.58■□□□□ 0.72
ERCC3-206ENST00000462306 TBC1D22AQ8WUA7 517 aa19.58■□□□□ 0.72
ERCC3-206ENST00000462306 DCPSQ96C86 337 aaKnown RBP19.58■□□□□ 0.72
ERCC3-206ENST00000462306 GPR108Q9NPR9 543 aa19.58■□□□□ 0.72
ERCC3-206ENST00000462306 CREBZFQ9NS37 354 aa19.58■□□□□ 0.72
ERCC3-206ENST00000462306 GNL3LQ9NVN8 582 aaKnown RBP19.58■□□□□ 0.72
ERCC3-206ENST00000462306 DLK2Q6UY11 383 aa19.57■□□□□ 0.72
ERCC3-206ENST00000462306 KRT26Q7Z3Y9 468 aa19.57■□□□□ 0.72
ERCC3-206ENST00000462306 NEUROD6Q96NK8 337 aa19.57■□□□□ 0.72
ERCC3-206ENST00000462306 PITPNM2Q9BZ72 1349 aa19.56■□□□□ 0.72
ERCC3-206ENST00000462306 POLR2AP24928 1970 aaKnown RBP19.56■□□□□ 0.72
ERCC3-206ENST00000462306 TMEM88BA6NKF7 163 aa19.56■□□□□ 0.72
ERCC3-206ENST00000462306 SEMA3EO15041 775 aa19.56■□□□□ 0.72
ERCC3-206ENST00000462306 TNNI3KQ59H18 835 aa19.56■□□□□ 0.72
ERCC3-206ENST00000462306 CST9Q5W186 159 aa19.56■□□□□ 0.72
ERCC3-206ENST00000462306 TTF2Q9UNY4 1162 aaKnown RBP19.56■□□□□ 0.72
ERCC3-206ENST00000462306 EXOC6BQ9Y2D4 811 aa19.56■□□□□ 0.72
ERCC3-206ENST00000462306 PCDHAC2Q9Y5I4 1007 aa19.56■□□□□ 0.72
ERCC3-206ENST00000462306 FPGT-TNNI3KV9GXZ4 949 aa19.56■□□□□ 0.72
ERCC3-206ENST00000462306 CEP350Q5VT06 3117 aa19.56■□□□□ 0.72
ERCC3-206ENST00000462306 ADM5C9JUS6 153 aa19.55■□□□□ 0.72
ERCC3-206ENST00000462306 HMMRO75330 724 aa19.55■□□□□ 0.72
ERCC3-206ENST00000462306 DLGAP5Q15398 846 aa19.55■□□□□ 0.72
ERCC3-206ENST00000462306 CFAP100Q494V2 611 aa19.55■□□□□ 0.72
ERCC3-206ENST00000462306 WDR66Q8TBY9 1149 aa19.55■□□□□ 0.72
ERCC3-206ENST00000462306 SPDYE2BA6NHP3 402 aa19.54■□□□□ 0.72
ERCC3-206ENST00000462306 SPDYE6P0CI01 402 aa19.54■□□□□ 0.72
ERCC3-206ENST00000462306 RASGRF1Q13972 1273 aa19.54■□□□□ 0.72
ERCC3-206ENST00000462306 SULF1Q8IWU6 871 aa19.54■□□□□ 0.72
ERCC3-206ENST00000462306 PRMT6Q96LA8 375 aaPredicted RBP19.54■□□□□ 0.72
ERCC3-206ENST00000462306 SERPINA10Q9UK55 444 aa19.54■□□□□ 0.72
ERCC3-206ENST00000462306 DENND2AQ9ULE3 1009 aa19.54■□□□□ 0.72
ERCC3-206ENST00000462306 SUGT1Q9Y2Z0 365 aa19.54■□□□□ 0.72
ERCC3-206ENST00000462306 MYH13Q9UKX3 1938 aa19.53■□□□□ 0.72
ERCC3-206ENST00000462306 HSP90AB4PQ58FF6 505 aa19.53■□□□□ 0.72
ERCC3-206ENST00000462306 ERC1Q8IUD2 1116 aa19.53■□□□□ 0.72
ERCC3-206ENST00000462306 TRPM7Q96QT4 1865 aa19.53■□□□□ 0.72
ERCC3-206ENST00000462306 AOX1Q06278 1338 aa19.52■□□□□ 0.72
ERCC3-206ENST00000462306 PDS5AQ29RF7 1337 aaKnown RBP19.52■□□□□ 0.72
ERCC3-206ENST00000462306 SALL1Q9NSC2 1324 aa19.52■□□□□ 0.72
ERCC3-206ENST00000462306 CELF2O95319 508 aaKnown RBP19.52■□□□□ 0.72
ERCC3-206ENST00000462306 HDLBPQ00341 1268 aaKnown RBP19.52■□□□□ 0.72
ERCC3-206ENST00000462306 GORABQ5T7V8 394 aa19.52■□□□□ 0.72
ERCC3-206ENST00000462306 EAF2Q96CJ1 260 aaPredicted RBP19.52■□□□□ 0.72
ERCC3-206ENST00000462306 DBNDD2Q9BQY9 259 aa19.52■□□□□ 0.72
ERCC3-206ENST00000462306 SCAF8Q9UPN6 1271 aaKnown RBP19.52■□□□□ 0.72
ERCC3-206ENST00000462306 ARID4AP29374 1257 aaPredicted RBP19.51■□□□□ 0.71
ERCC3-206ENST00000462306 CRKP46108 304 aa19.51■□□□□ 0.71
ERCC3-206ENST00000462306 RBM5P52756 815 aaKnown RBP eCLIP19.51■□□□□ 0.71
ERCC3-206ENST00000462306 RHPN1Q8TCX5 695 aa19.51■□□□□ 0.71
ERCC3-206ENST00000462306 KLRG1Q96E93 195 aa19.51■□□□□ 0.71
ERCC3-206ENST00000462306 MRIQ9BWK5 157 aa19.51■□□□□ 0.71
ERCC3-206ENST00000462306 CDCA5Q96FF9 252 aa19.5■□□□□ 0.71
ERCC3-206ENST00000462306 CRBNQ96SW2 442 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms