RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 MAP3K9P80192 1104 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 PSME1Q06323 249 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 MTX1Q13505 466 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 KRT32Q14532 448 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 TOGARAM2Q6ZUX3 1019 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 IL17REQ8NFR9 667 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 GEMIN8Q9NWZ8 242 aaKnown RBP9.3□□□□□ -0.92
ERCC8-204ENST00000462279 NPHP4O75161 1426 aaPredicted RBP9.3□□□□□ -0.92
ERCC8-204ENST00000462279 MARCKSP29966 332 aaPredicted RBP9.3□□□□□ -0.92
ERCC8-204ENST00000462279 TXLNAP40222 546 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 MAGEA9P43362 315 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 NCAPHQ15003 741 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 BEND3Q5T5X7 828 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 RAB11FIP4Q86YS3 637 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 BAG1Q99933 345 aaPredicted RBP9.3□□□□□ -0.92
ERCC8-204ENST00000462279 MRFAP1Q9Y605 127 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 DLC1Q96QB1 1528 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 PLEKHG2Q9H7P9 1386 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 USP42Q9H9J4 1324 aaKnown RBP9.3□□□□□ -0.92
ERCC8-204ENST00000462279 CCDC151A5D8V7 595 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 APPP05067 770 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 CYP21A2P08686 494 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 KCNJ6P48051 423 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 NLRP12P59046 1061 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 CHMP4BP1P59074 171 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 NBPF6Q5VWK0 638 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 ADALQ6DHV7 355 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 NBPF4Q96M43 638 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 GJB4Q9NTQ9 266 aa9.3□□□□□ -0.92
ERCC8-204ENST00000462279 ARHGAP6O43182 974 aa9.29□□□□□ -0.92
ERCC8-204ENST00000462279 WDHD1O75717 1129 aaPredicted RBP9.29□□□□□ -0.92
ERCC8-204ENST00000462279 CTDNEP1O95476 244 aa9.29□□□□□ -0.92
ERCC8-204ENST00000462279 TFRCP02786 760 aaKnown RBP9.29□□□□□ -0.92
ERCC8-204ENST00000462279 GUCY2CP25092 1073 aa9.29□□□□□ -0.92
ERCC8-204ENST00000462279 NAA16Q6N069 864 aaPredicted RBP9.29□□□□□ -0.92
ERCC8-204ENST00000462279 SIRT1Q96EB6 747 aa9.29□□□□□ -0.92
ERCC8-204ENST00000462279 MYCBPQ99417 103 aaPredicted RBP9.29□□□□□ -0.92
ERCC8-204ENST00000462279 BICC1Q9H694 974 aaKnown RBP9.29□□□□□ -0.92
ERCC8-204ENST00000462279 YY1AP1Q9H869 796 aa9.29□□□□□ -0.92
ERCC8-204ENST00000462279 FAM208AQ9UK61 1670 aaKnown RBP9.29□□□□□ -0.92
ERCC8-204ENST00000462279 EIF3JO75822 258 aaKnown RBP9.29□□□□□ -0.92
ERCC8-204ENST00000462279 SASH1O94885 1247 aa9.29□□□□□ -0.92
ERCC8-204ENST00000462279 RSRC2Q7L4I2 434 aaKnown RBP9.29□□□□□ -0.92
ERCC8-204ENST00000462279 HDXQ7Z353 690 aa9.29□□□□□ -0.92
ERCC8-204ENST00000462279 FANCLQ9NW38 375 aa9.29□□□□□ -0.92
ERCC8-204ENST00000462279 RNF216Q9NWF9 866 aaPredicted RBP9.29□□□□□ -0.92
ERCC8-204ENST00000462279 CBFA2T2O43439 604 aa9.28□□□□□ -0.92
ERCC8-204ENST00000462279 SYNE3Q6ZMZ3 975 aa9.28□□□□□ -0.92
ERCC8-204ENST00000462279 MICALL1Q8N3F8 863 aa9.28□□□□□ -0.92
ERCC8-204ENST00000462279 USHBP1Q8N6Y0 703 aa9.28□□□□□ -0.92
ERCC8-204ENST00000462279 PSD3Q9NYI0 1048 aa9.28□□□□□ -0.92
ERCC8-204ENST00000462279 SPTLC2O15270 562 aa9.28□□□□□ -0.92
ERCC8-204ENST00000462279 DHX8Q14562 1220 aaKnown RBP9.28□□□□□ -0.92
ERCC8-204ENST00000462279 PPM1EQ8WY54 764 aa9.28□□□□□ -0.92
ERCC8-204ENST00000462279 NCAPGQ9BPX3 1015 aa9.28□□□□□ -0.92
ERCC8-204ENST00000462279 ABCB6Q9NP58 842 aa9.28□□□□□ -0.92
ERCC8-204ENST00000462279 AKAP2Q9Y2D5 859 aa9.28□□□□□ -0.92
ERCC8-204ENST00000462279 ACEP12821 1306 aa9.28□□□□□ -0.92
ERCC8-204ENST00000462279 MYL5Q02045 173 aa9.28□□□□□ -0.92
ERCC8-204ENST00000462279 AIMP1Q12904 312 aaKnown RBP9.28□□□□□ -0.92
ERCC8-204ENST00000462279 MTF1Q14872 753 aa9.28□□□□□ -0.92
ERCC8-204ENST00000462279 CNNM3Q8NE01 707 aa9.28□□□□□ -0.92
ERCC8-204ENST00000462279 SMARCC2Q8TAQ2 1214 aa9.28□□□□□ -0.92
ERCC8-204ENST00000462279 CPLX3Q8WVH0 158 aa9.28□□□□□ -0.92
ERCC8-204ENST00000462279 PNKPQ96T60 521 aa9.28□□□□□ -0.92
ERCC8-204ENST00000462279 RABEP2Q9H5N1 569 aa9.28□□□□□ -0.92
ERCC8-204ENST00000462279 MAP3K2Q9Y2U5 619 aa9.28□□□□□ -0.92
ERCC8-204ENST00000462279 ALKQ9UM73 1620 aa9.27□□□□□ -0.92
ERCC8-204ENST00000462279 PFKFB1P16118 471 aa9.27□□□□□ -0.92
ERCC8-204ENST00000462279 PNOCQ13519 176 aa9.27□□□□□ -0.92
ERCC8-204ENST00000462279 BRD3Q15059 726 aa9.27□□□□□ -0.92
ERCC8-204ENST00000462279 KIF4BQ2VIQ3 1234 aa9.27□□□□□ -0.92
ERCC8-204ENST00000462279 DDX46Q7L014 1031 aaKnown RBP9.27□□□□□ -0.92
ERCC8-204ENST00000462279 VSTM4Q8IW00 320 aa9.27□□□□□ -0.92
ERCC8-204ENST00000462279 LINC00301Q8NCQ3 95 aa9.27□□□□□ -0.92
ERCC8-204ENST00000462279 PRR36Q9H6K5 1346 aa9.27□□□□□ -0.93
ERCC8-204ENST00000462279 KCNQ3O43525 872 aa9.27□□□□□ -0.93
ERCC8-204ENST00000462279 PFKFB2O60825 505 aa9.27□□□□□ -0.93
ERCC8-204ENST00000462279 ERLIN1O75477 346 aa9.27□□□□□ -0.93
ERCC8-204ENST00000462279 STOX1Q6ZVD7 989 aa9.27□□□□□ -0.93
ERCC8-204ENST00000462279 STK11IPQ8N1F8 1099 aa9.27□□□□□ -0.93
ERCC8-204ENST00000462279 FAM204AQ9H8W3 233 aa9.27□□□□□ -0.93
ERCC8-204ENST00000462279 MAP2K7O14733 419 aa9.27□□□□□ -0.93
ERCC8-204ENST00000462279 PRR29P0C7W0 189 aa9.27□□□□□ -0.93
ERCC8-204ENST00000462279 ATP2B1P20020 1258 aa9.27□□□□□ -0.93
ERCC8-204ENST00000462279 BEND6Q5SZJ8 279 aaPredicted RBP9.27□□□□□ -0.93
ERCC8-204ENST00000462279 OLFM4Q6UX06 510 aa9.27□□□□□ -0.93
ERCC8-204ENST00000462279 GDAP1L1Q96MZ0 367 aa9.27□□□□□ -0.93
ERCC8-204ENST00000462279 ALDH8A1Q9H2A2 487 aaPredicted RBP9.27□□□□□ -0.93
ERCC8-204ENST00000462279 HSD3B7Q9H2F3 369 aa9.27□□□□□ -0.93
ERCC8-204ENST00000462279 HDAC5Q9UQL6 1122 aa9.27□□□□□ -0.93
ERCC8-204ENST00000462279 PEAK1Q9H792 1746 aa9.26□□□□□ -0.93
ERCC8-204ENST00000462279 C8orf76Q96K31 380 aa9.26□□□□□ -0.93
ERCC8-204ENST00000462279 BPIFA3Q9BQP9 254 aa9.26□□□□□ -0.93
ERCC8-204ENST00000462279 LLPHQ9BRT6 129 aaKnown RBP9.26□□□□□ -0.93
ERCC8-204ENST00000462279 MRPL44Q9H9J2 332 aaKnown RBP9.26□□□□□ -0.93
ERCC8-204ENST00000462279 BRMS1Q9HCU9 246 aa9.26□□□□□ -0.93
ERCC8-204ENST00000462279 RTEL1Q9NZ71 1219 aa9.26□□□□□ -0.93
ERCC8-204ENST00000462279 A0A0G2JLW4 131 aa9.26□□□□□ -0.93
ERCC8-204ENST00000462279 A0A0U1RQJ8 604 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms