RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 KIF3BO15066 747 aa7.65□□□□□ -1.18
COPS3-204ENST00000462236 SPEM2Q0P670 501 aa7.65□□□□□ -1.18
COPS3-204ENST00000462236 CEP162Q5TB80 1403 aa7.65□□□□□ -1.18
COPS3-204ENST00000462236 SNX29Q8TEQ0 813 aa7.65□□□□□ -1.18
COPS3-204ENST00000462236 ELP3Q9H9T3 547 aa7.65□□□□□ -1.18
COPS3-204ENST00000462236 STRN4Q9NRL3 753 aa7.65□□□□□ -1.18
COPS3-204ENST00000462236 MYO5BQ9ULV0 1848 aa7.65□□□□□ -1.18
COPS3-204ENST00000462236 SHPRHQ149N8 1683 aa7.64□□□□□ -1.19
COPS3-204ENST00000462236 PIK3C2BO00750 1634 aa7.64□□□□□ -1.19
COPS3-204ENST00000462236 WASHC2CQ9Y4E1 1318 aa7.64□□□□□ -1.19
COPS3-204ENST00000462236 HOXD8P13378 290 aaPredicted RBP7.64□□□□□ -1.19
COPS3-204ENST00000462236 LTKP29376 864 aa7.64□□□□□ -1.19
COPS3-204ENST00000462236 PNMA5Q96PV4 448 aa7.64□□□□□ -1.19
COPS3-204ENST00000462236 USP20Q9Y2K6 914 aa7.64□□□□□ -1.19
COPS3-204ENST00000462236 LRRC9Q6ZRR7 1453 aa7.63□□□□□ -1.19
COPS3-204ENST00000462236 RBM47A0AV96 593 aaKnown RBP7.63□□□□□ -1.19
COPS3-204ENST00000462236 TNFRSF21O75509 655 aa7.63□□□□□ -1.19
COPS3-204ENST00000462236 CD33P20138 364 aa7.63□□□□□ -1.19
COPS3-204ENST00000462236 SOX18P35713 384 aa7.63□□□□□ -1.19
COPS3-204ENST00000462236 MAP2K3P46734 347 aa7.63□□□□□ -1.19
COPS3-204ENST00000462236 NFX1Q12986 1120 aaKnown RBP7.63□□□□□ -1.19
COPS3-204ENST00000462236 PCSK7Q16549 785 aa7.63□□□□□ -1.19
COPS3-204ENST00000462236 EAPPQ56P03 285 aaPredicted RBP7.63□□□□□ -1.19
COPS3-204ENST00000462236 TTC39BQ5VTQ0 682 aaPredicted RBP7.63□□□□□ -1.19
COPS3-204ENST00000462236 IRF7Q92985 503 aa7.63□□□□□ -1.19
COPS3-204ENST00000462236 NIF3L1Q9GZT8 377 aa7.63□□□□□ -1.19
COPS3-204ENST00000462236 MBIPQ9NS73 344 aa7.63□□□□□ -1.19
COPS3-204ENST00000462236 ABI2Q9NYB9 513 aaPredicted RBP7.63□□□□□ -1.19
COPS3-204ENST00000462236 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.63□□□□□ -1.19
COPS3-204ENST00000462236 ARHGAP31Q2M1Z3 1444 aa7.62□□□□□ -1.19
COPS3-204ENST00000462236 BMP4P12644 408 aa7.62□□□□□ -1.19
COPS3-204ENST00000462236 MX2P20592 715 aa7.62□□□□□ -1.19
COPS3-204ENST00000462236 ITGAEP38570 1179 aa7.62□□□□□ -1.19
COPS3-204ENST00000462236 ENOX2Q16206 610 aaKnown RBP7.62□□□□□ -1.19
COPS3-204ENST00000462236 ZNF468Q5VIY5 522 aaPredicted RBP7.62□□□□□ -1.19
COPS3-204ENST00000462236 FBXO33Q7Z6M2 555 aa7.62□□□□□ -1.19
COPS3-204ENST00000462236 FBF1Q8TES7 1133 aa7.62□□□□□ -1.19
COPS3-204ENST00000462236 CSRNP1Q96S65 589 aa7.62□□□□□ -1.19
COPS3-204ENST00000462236 BCL11AQ9H165 835 aa7.62□□□□□ -1.19
COPS3-204ENST00000462236 HCN2Q9UL51 889 aa7.62□□□□□ -1.19
COPS3-204ENST00000462236 PRR12Q9ULL5 1215 aa7.62□□□□□ -1.19
COPS3-204ENST00000462236 PRDM15P57071 1507 aaPredicted RBP7.62□□□□□ -1.19
COPS3-204ENST00000462236 MTUS2Q5JR59 1369 aa7.61□□□□□ -1.19
COPS3-204ENST00000462236 LRP6O75581 1613 aa7.61□□□□□ -1.19
COPS3-204ENST00000462236 GPR25O00155 361 aa7.61□□□□□ -1.19
COPS3-204ENST00000462236 CPNE3O75131 537 aaKnown RBP7.61□□□□□ -1.19
COPS3-204ENST00000462236 SIN3BO75182 1162 aa7.61□□□□□ -1.19
COPS3-204ENST00000462236 SASH3O75995 380 aa7.61□□□□□ -1.19
COPS3-204ENST00000462236 RARAP10276 462 aa7.61□□□□□ -1.19
COPS3-204ENST00000462236 ARAFP10398 606 aa7.61□□□□□ -1.19
COPS3-204ENST00000462236 CTBSQ01459 385 aa7.61□□□□□ -1.19
COPS3-204ENST00000462236 ATP2B2Q01814 1243 aa7.61□□□□□ -1.19
COPS3-204ENST00000462236 GAS6Q14393 721 aa7.61□□□□□ -1.19
COPS3-204ENST00000462236 ZNF326Q5BKZ1 582 aaKnown RBP7.61□□□□□ -1.19
COPS3-204ENST00000462236 ALG1LQ6GMV1 187 aa7.61□□□□□ -1.19
COPS3-204ENST00000462236 OR13H1Q8NG92 308 aa7.61□□□□□ -1.19
COPS3-204ENST00000462236 SLC30A3Q99726 388 aa7.61□□□□□ -1.19
COPS3-204ENST00000462236 BCL2L13Q9BXK5 485 aa7.61□□□□□ -1.19
COPS3-204ENST00000462236 ZFYVE28Q9HCC9 887 aa7.61□□□□□ -1.19
COPS3-204ENST00000462236 TLR7Q9NYK1 1049 aaKnown RBP7.61□□□□□ -1.19
COPS3-204ENST00000462236 TMEM63CQ9P1W3 806 aa7.61□□□□□ -1.19
COPS3-204ENST00000462236 NKTRP30414 1462 aaKnown RBP7.61□□□□□ -1.19
COPS3-204ENST00000462236 TMEM94Q12767 1356 aa7.6□□□□□ -1.19
COPS3-204ENST00000462236 PHACTR2O75167 634 aa7.6□□□□□ -1.19
COPS3-204ENST00000462236 P4HBP07237 508 aaKnown RBP7.6□□□□□ -1.19
COPS3-204ENST00000462236 NFKB1P19838 968 aa7.6□□□□□ -1.19
COPS3-204ENST00000462236 FRMD6Q96NE9 622 aa7.6□□□□□ -1.19
COPS3-204ENST00000462236 CDK12Q9NYV4 1490 aaPredicted RBP7.6□□□□□ -1.19
COPS3-204ENST00000462236 AHDC1Q5TGY3 1603 aaPredicted RBP7.6□□□□□ -1.19
COPS3-204ENST00000462236 JCADQ9P266 1359 aa7.59□□□□□ -1.19
COPS3-204ENST00000462236 DIP2AQ14689 1571 aa7.59□□□□□ -1.19
COPS3-204ENST00000462236 EIF1AYO14602 144 aaKnown RBP7.59□□□□□ -1.19
COPS3-204ENST00000462236 PSAPP07602 524 aa7.59□□□□□ -1.19
COPS3-204ENST00000462236 TARSP26639 723 aaKnown RBP7.59□□□□□ -1.19
COPS3-204ENST00000462236 NRLP54845 237 aa7.59□□□□□ -1.19
COPS3-204ENST00000462236 GPR161Q8N6U8 529 aaKnown RBP7.59□□□□□ -1.19
COPS3-204ENST00000462236 BHMTQ93088 406 aa7.59□□□□□ -1.19
COPS3-204ENST00000462236 ZFATQ9P243 1243 aa7.59□□□□□ -1.19
COPS3-204ENST00000462236 CROCC2H7BZ55 1655 aa7.59□□□□□ -1.19
COPS3-204ENST00000462236 FGD6Q6ZV73 1430 aa7.59□□□□□ -1.19
COPS3-204ENST00000462236 TMEM2Q9UHN6 1383 aa7.59□□□□□ -1.2
COPS3-204ENST00000462236 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.58□□□□□ -1.2
COPS3-204ENST00000462236 EP400Q96L91 3159 aa7.58□□□□□ -1.2
COPS3-204ENST00000462236 A6NHS1 94 aa7.58□□□□□ -1.2
COPS3-204ENST00000462236 C2CD2LO14523 706 aa7.58□□□□□ -1.2
COPS3-204ENST00000462236 MMP20O60882 483 aa7.58□□□□□ -1.2
COPS3-204ENST00000462236 PRPF40AO75400 957 aaKnown RBP7.58□□□□□ -1.2
COPS3-204ENST00000462236 KCNA6P17658 529 aa7.58□□□□□ -1.2
COPS3-204ENST00000462236 ADH6P28332 368 aa7.58□□□□□ -1.2
COPS3-204ENST00000462236 MAPK8P45983 427 aa7.58□□□□□ -1.2
COPS3-204ENST00000462236 VEGFBP49765 207 aa7.58□□□□□ -1.2
COPS3-204ENST00000462236 PLAURQ03405 335 aa7.58□□□□□ -1.2
COPS3-204ENST00000462236 SRSF11Q05519 484 aaKnown RBP7.58□□□□□ -1.2
COPS3-204ENST00000462236 DHX32Q7L7V1 743 aaKnown RBP7.58□□□□□ -1.2
COPS3-204ENST00000462236 SYT9Q86SS6 491 aa7.58□□□□□ -1.2
COPS3-204ENST00000462236 TRPM4Q8TD43 1214 aa7.58□□□□□ -1.2
COPS3-204ENST00000462236 TNFRSF25Q93038 417 aa7.58□□□□□ -1.2
COPS3-204ENST00000462236 COL25A1Q9BXS0 654 aaPredicted RBP7.58□□□□□ -1.2
COPS3-204ENST00000462236 GDF2Q9UK05 429 aaPredicted RBP7.58□□□□□ -1.2
COPS3-204ENST00000462236 PNMA6FA0A0J9YX94 578 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms