RNA–Protein interactions for RNA: ENST00000462212.5

ITSN1-222, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-222	ENST00000462212	ASTN2	O75129	1339 aa	Predicted RBP	10.39	□□□□□ -0.75
ITSN1-222	ENST00000462212	PITPNM2	Q9BZ72	1349 aa		10.39	□□□□□ -0.75
ITSN1-222	ENST00000462212	ARAP2	Q8WZ64	1704 aa		10.39	□□□□□ -0.75
ITSN1-222	ENST00000462212	PNMA6E	A0A0J9YXQ4	647 aa		10.39	□□□□□ -0.75
ITSN1-222	ENST00000462212	WNT10B	O00744	389 aa		10.39	□□□□□ -0.75
ITSN1-222	ENST00000462212	ZBTB22	O15209	634 aa		10.39	□□□□□ -0.75
ITSN1-222	ENST00000462212	IFIT1	P09914	478 aa	Known RBP	10.39	□□□□□ -0.75
ITSN1-222	ENST00000462212	SCARF1	Q14162	830 aa		10.39	□□□□□ -0.75
ITSN1-222	ENST00000462212	KRT26	Q7Z3Y9	468 aa		10.39	□□□□□ -0.75
ITSN1-222	ENST00000462212	KIAA0825	Q8IV33	1275 aa		10.39	□□□□□ -0.75
ITSN1-222	ENST00000462212	ITPRIP	Q8IWB1	547 aa		10.39	□□□□□ -0.75
ITSN1-222	ENST00000462212	MTMR14	Q8NCE2	650 aa		10.39	□□□□□ -0.75
ITSN1-222	ENST00000462212	GGA3	Q9NZ52	723 aa		10.39	□□□□□ -0.75
ITSN1-222	ENST00000462212	RASSF10	A6NK89	507 aa		10.38	□□□□□ -0.75
ITSN1-222	ENST00000462212	MS4A1	P11836	297 aa		10.38	□□□□□ -0.75
ITSN1-222	ENST00000462212	SLC5A1	P13866	664 aa		10.38	□□□□□ -0.75
ITSN1-222	ENST00000462212	BCAM	P50895	628 aa		10.38	□□□□□ -0.75
ITSN1-222	ENST00000462212	POLA2	Q14181	598 aa		10.38	□□□□□ -0.75
ITSN1-222	ENST00000462212	NBPF9	Q3BBW0	867 aa		10.38	□□□□□ -0.75
ITSN1-222	ENST00000462212	CAVIN4	Q5BKX8	364 aa		10.38	□□□□□ -0.75
ITSN1-222	ENST00000462212	USP48	Q86UV5	1035 aa		10.38	□□□□□ -0.75
ITSN1-222	ENST00000462212	PANK1	Q8TE04	598 aa		10.38	□□□□□ -0.75
ITSN1-222	ENST00000462212	SSH3	Q8TE77	659 aa		10.38	□□□□□ -0.75
ITSN1-222	ENST00000462212	DCPS	Q96C86	337 aa	Known RBP	10.38	□□□□□ -0.75
ITSN1-222	ENST00000462212	CEP126	Q9P2H0	1117 aa		10.38	□□□□□ -0.75
ITSN1-222	ENST00000462212	HDAC9	Q9UKV0	1011 aa		10.38	□□□□□ -0.75
ITSN1-222	ENST00000462212	ADM5	C9JUS6	153 aa		10.37	□□□□□ -0.75
ITSN1-222	ENST00000462212	CELF2	O95319	508 aa	Known RBP	10.37	□□□□□ -0.75
ITSN1-222	ENST00000462212	ATP8B2	P98198	1209 aa		10.37	□□□□□ -0.75
ITSN1-222	ENST00000462212	ATP2B3	Q16720	1220 aa		10.37	□□□□□ -0.75
ITSN1-222	ENST00000462212	MFSD14B	Q5SR56	506 aa		10.37	□□□□□ -0.75
ITSN1-222	ENST00000462212	ANGEL2	Q5VTE6	544 aa	Known RBP	10.37	□□□□□ -0.75
ITSN1-222	ENST00000462212	VPS37D	Q86XT2	251 aa		10.37	□□□□□ -0.75
ITSN1-222	ENST00000462212	SULF1	Q8IWU6	871 aa		10.37	□□□□□ -0.75
ITSN1-222	ENST00000462212	MKRN1	Q9UHC7	482 aa	Known RBP	10.37	□□□□□ -0.75
ITSN1-222	ENST00000462212	JAG2	Q9Y219	1238 aa		10.37	□□□□□ -0.75
ITSN1-222	ENST00000462212	TLL2	Q9Y6L7	1015 aa		10.37	□□□□□ -0.75
ITSN1-222	ENST00000462212	DLK2	Q6UY11	383 aa		10.36	□□□□□ -0.75
ITSN1-222	ENST00000462212	TBC1D22A	Q8WUA7	517 aa		10.36	□□□□□ -0.75
ITSN1-222	ENST00000462212	C1orf115	Q9H7X2	142 aa		10.36	□□□□□ -0.75
ITSN1-222	ENST00000462212	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.36	□□□□□ -0.75
ITSN1-222	ENST00000462212	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	10.36	□□□□□ -0.75
ITSN1-222	ENST00000462212	COL1A1	P02452	1464 aa	Predicted RBP	10.36	□□□□□ -0.75
ITSN1-222	ENST00000462212	ECM29	Q5VYK3	1845 aa		10.35	□□□□□ -0.75
ITSN1-222	ENST00000462212	SPDYE2B	A6NHP3	402 aa		10.35	□□□□□ -0.75
ITSN1-222	ENST00000462212	SPDYE6	P0CI01	402 aa		10.35	□□□□□ -0.75
ITSN1-222	ENST00000462212	TFCP2	Q12800	502 aa		10.35	□□□□□ -0.75
ITSN1-222	ENST00000462212	MVP	Q14764	893 aa	Known RBP	10.35	□□□□□ -0.75
ITSN1-222	ENST00000462212	DEFB115	Q30KQ5	88 aa		10.35	□□□□□ -0.75
ITSN1-222	ENST00000462212	SAPCD2	Q86UD0	394 aa		10.35	□□□□□ -0.75
ITSN1-222	ENST00000462212	HHIPL1	Q96JK4	782 aa		10.35	□□□□□ -0.75
ITSN1-222	ENST00000462212	ABT1	Q9ULW3	272 aa	Known RBP	10.35	□□□□□ -0.75
ITSN1-222	ENST00000462212	DDX19B	Q9UMR2	479 aa		10.35	□□□□□ -0.75
ITSN1-222	ENST00000462212	NOP58	Q9Y2X3	529 aa	Known RBP	10.35	□□□□□ -0.75
ITSN1-222	ENST00000462212	SUGT1	Q9Y2Z0	365 aa		10.35	□□□□□ -0.75
ITSN1-222	ENST00000462212	MYH13	Q9UKX3	1938 aa		10.35	□□□□□ -0.75
ITSN1-222	ENST00000462212	PCNT	O95613	3336 aa		10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	THSD7B	Q9C0I4	1608 aa		10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212		A0A1B0GUL7	405 aa		10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212		F8W031	263 aa	Predicted RBP	10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	ADORA1	P30542	326 aa		10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	PHKA1	P46020	1223 aa		10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	VEGFB	P49765	207 aa		10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	HDLBP	Q00341	1268 aa	Known RBP	10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	CHAF1A	Q13111	956 aa	Predicted RBP	10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	G3BP1	Q13283	466 aa	Known RBP eCLIP	10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	PDE3A	Q14432	1141 aa		10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	DLGAP5	Q15398	846 aa		10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	GRIK5	Q16478	980 aa		10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	CFAP100	Q494V2	611 aa		10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	CEP85	Q6P2H3	762 aa		10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	CDCA5	Q96FF9	252 aa		10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	MRI	Q9BWK5	157 aa		10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	GBA2	Q9HCG7	927 aa	Predicted RBP	10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	ZBTB40	Q9NUA8	1239 aa		10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	SERPINA10	Q9UK55	444 aa		10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	TTF2	Q9UNY4	1162 aa	Known RBP	10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	AKAP2	Q9Y2D5	859 aa		10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	PCDHAC2	Q9Y5I4	1007 aa		10.34	□□□□□ -0.75
ITSN1-222	ENST00000462212	PDS5A	Q29RF7	1337 aa	Known RBP	10.33	□□□□□ -0.76
ITSN1-222	ENST00000462212	SEMA3E	O15041	775 aa		10.33	□□□□□ -0.76
ITSN1-222	ENST00000462212	FRAT2	O75474	233 aa	Predicted RBP	10.33	□□□□□ -0.76
ITSN1-222	ENST00000462212	TIMM10	P62072	90 aa		10.33	□□□□□ -0.76
ITSN1-222	ENST00000462212	CCDC102B	Q68D86	513 aa		10.33	□□□□□ -0.76
ITSN1-222	ENST00000462212	APOBEC3F	Q8IUX4	373 aa	Known RBP	10.33	□□□□□ -0.76
ITSN1-222	ENST00000462212	WDR66	Q8TBY9	1149 aa		10.33	□□□□□ -0.76
ITSN1-222	ENST00000462212	XAGE2	Q96GT9	111 aa		10.33	□□□□□ -0.76
ITSN1-222	ENST00000462212	PRMT6	Q96LA8	375 aa	Predicted RBP	10.33	□□□□□ -0.76
ITSN1-222	ENST00000462212	ZNF408	Q9H9D4	720 aa		10.33	□□□□□ -0.76
ITSN1-222	ENST00000462212	GPR108	Q9NPR9	543 aa		10.33	□□□□□ -0.76
ITSN1-222	ENST00000462212	GNL3L	Q9NVN8	582 aa	Known RBP	10.33	□□□□□ -0.76
ITSN1-222	ENST00000462212	COG6	Q9Y2V7	657 aa		10.33	□□□□□ -0.76
ITSN1-222	ENST00000462212	AOX1	Q06278	1338 aa		10.33	□□□□□ -0.76
ITSN1-222	ENST00000462212	SALL1	Q9NSC2	1324 aa		10.33	□□□□□ -0.76
ITSN1-222	ENST00000462212	PAPPA2	Q9BXP8	1791 aa		10.32	□□□□□ -0.76
ITSN1-222	ENST00000462212	CRK	P46108	304 aa		10.32	□□□□□ -0.76
ITSN1-222	ENST00000462212	FKBP1B	P68106	108 aa		10.32	□□□□□ -0.76
ITSN1-222	ENST00000462212	C20orf194	Q5TEA3	1177 aa		10.32	□□□□□ -0.76
ITSN1-222	ENST00000462212	C2orf69	Q8N8R5	385 aa		10.32	□□□□□ -0.76
ITSN1-222	ENST00000462212	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	10.32	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms