RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 NBPF9Q3BBW0 867 aa11.09□□□□□ -0.63
LDB1-203ENST00000461873 GMLQ99445 158 aa11.09□□□□□ -0.63
LDB1-203ENST00000461873 MXD3Q9BW11 206 aa11.09□□□□□ -0.63
LDB1-203ENST00000461873 BICC1Q9H694 974 aaKnown RBP11.09□□□□□ -0.63
LDB1-203ENST00000461873 WNT10BO00744 389 aa11.08□□□□□ -0.64
LDB1-203ENST00000461873 IFIT1P09914 478 aaKnown RBP11.08□□□□□ -0.64
LDB1-203ENST00000461873 HSPA8P11142 646 aaKnown RBP11.08□□□□□ -0.64
LDB1-203ENST00000461873 IL1R1P14778 569 aa11.08□□□□□ -0.64
LDB1-203ENST00000461873 KLRK1P26718 216 aa11.08□□□□□ -0.64
LDB1-203ENST00000461873 EPHA10Q5JZY3 1008 aa11.08□□□□□ -0.64
LDB1-203ENST00000461873 C15orf52Q6ZUT6 534 aaKnown RBP11.08□□□□□ -0.64
LDB1-203ENST00000461873 CDCA7LQ96GN5 454 aa11.08□□□□□ -0.64
LDB1-203ENST00000461873 VEZTQ9HBM0 779 aa11.08□□□□□ -0.64
LDB1-203ENST00000461873 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.08□□□□□ -0.64
LDB1-203ENST00000461873 NOB1Q9ULX3 412 aaKnown RBP11.08□□□□□ -0.64
LDB1-203ENST00000461873 ASTN2O75129 1339 aaPredicted RBP11.08□□□□□ -0.64
LDB1-203ENST00000461873 PPP1R12BO60237 982 aaPredicted RBP11.07□□□□□ -0.64
LDB1-203ENST00000461873 FKBP1AP62942 108 aaKnown RBP11.07□□□□□ -0.64
LDB1-203ENST00000461873 TNFAIP1Q13829 316 aa11.07□□□□□ -0.64
LDB1-203ENST00000461873 SUPT20HL1Q3ZLR7 823 aa11.07□□□□□ -0.64
LDB1-203ENST00000461873 TBC1D22AQ8WUA7 517 aa11.07□□□□□ -0.64
LDB1-203ENST00000461873 JAG2Q9Y219 1238 aa11.07□□□□□ -0.64
LDB1-203ENST00000461873 UTYO14607 1347 aa11.07□□□□□ -0.64
LDB1-203ENST00000461873 KIF16BQ96L93 1317 aa11.07□□□□□ -0.64
LDB1-203ENST00000461873 SNAP23O00161 211 aa11.06□□□□□ -0.64
LDB1-203ENST00000461873 SLC5A1P13866 664 aa11.06□□□□□ -0.64
LDB1-203ENST00000461873 GYG1P46976 350 aa11.06□□□□□ -0.64
LDB1-203ENST00000461873 TNNI2P48788 182 aa11.06□□□□□ -0.64
LDB1-203ENST00000461873 KIF23Q02241 960 aaPredicted RBP11.06□□□□□ -0.64
LDB1-203ENST00000461873 CHAF1AQ13111 956 aaPredicted RBP11.06□□□□□ -0.64
LDB1-203ENST00000461873 PRKG1Q13976 671 aa11.06□□□□□ -0.64
LDB1-203ENST00000461873 CFAP100Q494V2 611 aa11.06□□□□□ -0.64
LDB1-203ENST00000461873 MFSD14BQ5SR56 506 aa11.06□□□□□ -0.64
LDB1-203ENST00000461873 DLK2Q6UY11 383 aa11.06□□□□□ -0.64
LDB1-203ENST00000461873 GNL3LQ9NVN8 582 aaKnown RBP11.06□□□□□ -0.64
LDB1-203ENST00000461873 TMOD2Q9NZR1 351 aa11.06□□□□□ -0.64
LDB1-203ENST00000461873 TSKSQ9UJT2 592 aa11.06□□□□□ -0.64
LDB1-203ENST00000461873 TTF2Q9UNY4 1162 aaKnown RBP11.06□□□□□ -0.64
LDB1-203ENST00000461873 SCAF8Q9UPN6 1271 aaKnown RBP11.06□□□□□ -0.64
LDB1-203ENST00000461873 PPP2R3BQ9Y5P8 575 aa11.06□□□□□ -0.64
LDB1-203ENST00000461873 AKAP11Q9UKA4 1901 aa11.05□□□□□ -0.64
LDB1-203ENST00000461873 UBE2Q2LH0YL09 131 aa11.05□□□□□ -0.64
LDB1-203ENST00000461873 PDE8BO95263 885 aa11.05□□□□□ -0.64
LDB1-203ENST00000461873 PUM3Q15397 648 aaKnown RBP11.05□□□□□ -0.64
LDB1-203ENST00000461873 RABL6Q3YEC7 729 aaPredicted RBP11.05□□□□□ -0.64
LDB1-203ENST00000461873 PRAMEF18Q5VWM3 479 aa11.05□□□□□ -0.64
LDB1-203ENST00000461873 FRAT1Q92837 279 aaPredicted RBP11.05□□□□□ -0.64
LDB1-203ENST00000461873 PUS3Q9BZE2 481 aaKnown RBP11.05□□□□□ -0.64
LDB1-203ENST00000461873 USP44Q9H0E7 712 aa11.05□□□□□ -0.64
LDB1-203ENST00000461873 DEFB129Q9H1M3 183 aa11.05□□□□□ -0.64
LDB1-203ENST00000461873 TRPA1O75762 1119 aa11.04□□□□□ -0.64
LDB1-203ENST00000461873 GNAI3P08754 354 aa11.04□□□□□ -0.64
LDB1-203ENST00000461873 SLC10A3P09131 477 aa11.04□□□□□ -0.64
LDB1-203ENST00000461873 HNRNPUQ00839 825 aaKnown RBP eCLIP11.04□□□□□ -0.64
LDB1-203ENST00000461873 SREBF2Q12772 1141 aa11.04□□□□□ -0.64
LDB1-203ENST00000461873 LRRC24Q50LG9 513 aa11.04□□□□□ -0.64
LDB1-203ENST00000461873 SAGE1Q9NXZ1 904 aa11.04□□□□□ -0.64
LDB1-203ENST00000461873 CEP126Q9P2H0 1117 aa11.04□□□□□ -0.64
LDB1-203ENST00000461873 ANGEL1Q9UNK9 670 aaKnown RBP11.04□□□□□ -0.64
LDB1-203ENST00000461873 RIPOR2Q9Y4F9 1068 aa11.04□□□□□ -0.64
LDB1-203ENST00000461873 MAST3O60307 1309 aa11.04□□□□□ -0.64
LDB1-203ENST00000461873 PAPPA2Q9BXP8 1791 aa11.03□□□□□ -0.64
LDB1-203ENST00000461873 CLRN2A0PK11 232 aa11.03□□□□□ -0.64
LDB1-203ENST00000461873 EYA2O00167 538 aa11.03□□□□□ -0.64
LDB1-203ENST00000461873 IREB2P48200 963 aaKnown RBP11.03□□□□□ -0.64
LDB1-203ENST00000461873 MTMR14Q8NCE2 650 aa11.03□□□□□ -0.64
LDB1-203ENST00000461873 TDRD7Q8NHU6 1098 aaKnown RBP11.03□□□□□ -0.64
LDB1-203ENST00000461873 SLC10A4Q96EP9 437 aa11.03□□□□□ -0.64
LDB1-203ENST00000461873 FAM84BQ96KN1 310 aaPredicted RBP11.03□□□□□ -0.64
LDB1-203ENST00000461873 SIL1Q9H173 461 aa11.03□□□□□ -0.64
LDB1-203ENST00000461873 SERPINA10Q9UK55 444 aa11.03□□□□□ -0.64
LDB1-203ENST00000461873 FBXO3Q9UK99 471 aa11.03□□□□□ -0.64
LDB1-203ENST00000461873 IQSEC3Q9UPP2 1182 aaPredicted RBP11.03□□□□□ -0.64
LDB1-203ENST00000461873 COL1A1P02452 1464 aaPredicted RBP11.03□□□□□ -0.64
LDB1-203ENST00000461873 FAM205AQ6ZU69 1335 aa11.03□□□□□ -0.64
LDB1-203ENST00000461873 SPDYE2BA6NHP3 402 aa11.02□□□□□ -0.65
LDB1-203ENST00000461873 CCDC85CA6NKD9 419 aa11.02□□□□□ -0.65
LDB1-203ENST00000461873 SPDYE6P0CI01 402 aa11.02□□□□□ -0.65
LDB1-203ENST00000461873 MKRN3Q13064 507 aaKnown RBP11.02□□□□□ -0.65
LDB1-203ENST00000461873 RASAL3Q86YV0 1011 aa11.02□□□□□ -0.65
LDB1-203ENST00000461873 TRMT2AQ8IZ69 625 aaKnown RBP11.02□□□□□ -0.65
LDB1-203ENST00000461873 ANKRD44Q8N8A2 993 aa11.02□□□□□ -0.65
LDB1-203ENST00000461873 KLHDC4Q8TBB5 520 aa11.02□□□□□ -0.65
LDB1-203ENST00000461873 LPIN2Q92539 896 aa11.02□□□□□ -0.65
LDB1-203ENST00000461873 ARHGAP45Q92619 1136 aa11.02□□□□□ -0.65
LDB1-203ENST00000461873 TEKT1Q969V4 418 aa11.02□□□□□ -0.65
LDB1-203ENST00000461873 HOOK2Q96ED9 719 aa11.02□□□□□ -0.65
LDB1-203ENST00000461873 KAZALD1Q96I82 304 aa11.02□□□□□ -0.65
LDB1-203ENST00000461873 THSD7BQ9C0I4 1608 aa11.02□□□□□ -0.65
LDB1-203ENST00000461873 A0A1B0GUL6 1792 aa11.01□□□□□ -0.65
LDB1-203ENST00000461873 FAM155AB1AL88 458 aaPredicted RBP11.01□□□□□ -0.65
LDB1-203ENST00000461873 WDHD1O75717 1129 aaPredicted RBP11.01□□□□□ -0.65
LDB1-203ENST00000461873 IL15P40933 162 aaPredicted RBP11.01□□□□□ -0.65
LDB1-203ENST00000461873 CRKP46108 304 aa11.01□□□□□ -0.65
LDB1-203ENST00000461873 RARSP54136 660 aaKnown RBP11.01□□□□□ -0.65
LDB1-203ENST00000461873 DGKZQ13574 1117 aa11.01□□□□□ -0.65
LDB1-203ENST00000461873 OTUD7BQ6GQQ9 843 aa11.01□□□□□ -0.65
LDB1-203ENST00000461873 MOB2Q70IA6 237 aa11.01□□□□□ -0.65
LDB1-203ENST00000461873 FTSJ3Q8IY81 847 aaKnown RBP11.01□□□□□ -0.65
LDB1-203ENST00000461873 CERS5Q8N5B7 392 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms