RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 TSNAXIP1Q2TAA8 658 aa4.9□□□□□ -1.63
HDAC6-212ENST00000461608 TTC39BQ5VTQ0 682 aaPredicted RBP4.9□□□□□ -1.63
HDAC6-212ENST00000461608 C8orf37Q96NL8 207 aa4.9□□□□□ -1.63
HDAC6-212ENST00000461608 LPIN3Q9BQK8 851 aa4.9□□□□□ -1.63
HDAC6-212ENST00000461608 HOXD8P13378 290 aaPredicted RBP4.89□□□□□ -1.63
HDAC6-212ENST00000461608 EDN3P14138 238 aa4.89□□□□□ -1.63
HDAC6-212ENST00000461608 CPB1P15086 417 aa4.89□□□□□ -1.63
HDAC6-212ENST00000461608 TARSP26639 723 aaKnown RBP4.89□□□□□ -1.63
HDAC6-212ENST00000461608 TAGLNQ01995 201 aaKnown RBP4.89□□□□□ -1.63
HDAC6-212ENST00000461608 PERM1Q5SV97 790 aa4.89□□□□□ -1.63
HDAC6-212ENST00000461608 IGF2-ASQ6U949 168 aa4.89□□□□□ -1.63
HDAC6-212ENST00000461608 GALNT12Q8IXK2 581 aa4.89□□□□□ -1.63
HDAC6-212ENST00000461608 CCDC74AQ96AQ1 378 aa4.89□□□□□ -1.63
HDAC6-212ENST00000461608 C12orf49Q9H741 205 aa4.89□□□□□ -1.63
HDAC6-212ENST00000461608 ZFYVE28Q9HCC9 887 aa4.89□□□□□ -1.63
HDAC6-212ENST00000461608 TMEM63CQ9P1W3 806 aa4.89□□□□□ -1.63
HDAC6-212ENST00000461608 FAM8A1Q9UBU6 413 aa4.89□□□□□ -1.63
HDAC6-212ENST00000461608 TRAK1Q9UPV9 953 aa4.89□□□□□ -1.63
HDAC6-212ENST00000461608 AK5Q9Y6K8 562 aa4.89□□□□□ -1.63
HDAC6-212ENST00000461608 A6NHS1 94 aa4.88□□□□□ -1.63
HDAC6-212ENST00000461608 CD97P48960 835 aa4.88□□□□□ -1.63
HDAC6-212ENST00000461608 ZC3H6P61129 1189 aaKnown RBP4.88□□□□□ -1.63
HDAC6-212ENST00000461608 INTS5Q6P9B9 1019 aaKnown RBP4.88□□□□□ -1.63
HDAC6-212ENST00000461608 FAM35AQ86V20 835 aa4.88□□□□□ -1.63
HDAC6-212ENST00000461608 FOXD3Q9UJU5 478 aaPredicted RBP4.88□□□□□ -1.63
HDAC6-212ENST00000461608 DEAF1O75398 565 aaPredicted RBP4.87□□□□□ -1.63
HDAC6-212ENST00000461608 SASH3O75995 380 aa4.87□□□□□ -1.63
HDAC6-212ENST00000461608 RARAP10276 462 aa4.87□□□□□ -1.63
HDAC6-212ENST00000461608 CES1P23141 567 aa4.87□□□□□ -1.63
HDAC6-212ENST00000461608 ST13P50502 369 aaKnown RBP4.87□□□□□ -1.63
HDAC6-212ENST00000461608 MSL1Q68DK7 614 aa4.87□□□□□ -1.63
HDAC6-212ENST00000461608 HFE2Q6ZVN8 426 aa4.87□□□□□ -1.63
HDAC6-212ENST00000461608 WFDC8Q8IUA0 241 aa4.87□□□□□ -1.63
HDAC6-212ENST00000461608 TMEM87AQ8NBN3 555 aa4.87□□□□□ -1.63
HDAC6-212ENST00000461608 OR13H1Q8NG92 308 aa4.87□□□□□ -1.63
HDAC6-212ENST00000461608 BACH2Q9BYV9 841 aa4.87□□□□□ -1.63
HDAC6-212ENST00000461608 CHRDQ9H2X0 955 aa4.87□□□□□ -1.63
HDAC6-212ENST00000461608 ZFYVE1Q9HBF4 777 aa4.87□□□□□ -1.63
HDAC6-212ENST00000461608 NPHS2Q9NP85 383 aa4.87□□□□□ -1.63
HDAC6-212ENST00000461608 PPP4R2Q9NY27 417 aa4.87□□□□□ -1.63
HDAC6-212ENST00000461608 WWC3Q9ULE0 1092 aa4.87□□□□□ -1.63
HDAC6-212ENST00000461608 KIF4AO95239 1232 aa4.86□□□□□ -1.63
HDAC6-212ENST00000461608 MAP3K6O95382 1288 aa4.86□□□□□ -1.63
HDAC6-212ENST00000461608 PSAPP07602 524 aa4.86□□□□□ -1.63
HDAC6-212ENST00000461608 XRCC5P13010 732 aaKnown RBP4.86□□□□□ -1.63
HDAC6-212ENST00000461608 NOS3P29474 1203 aa4.86□□□□□ -1.63
HDAC6-212ENST00000461608 GSTT1P30711 240 aa4.86□□□□□ -1.63
HDAC6-212ENST00000461608 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.86□□□□□ -1.63
HDAC6-212ENST00000461608 KIAA0319Q5VV43 1072 aa4.86□□□□□ -1.63
HDAC6-212ENST00000461608 DHX32Q7L7V1 743 aaKnown RBP4.86□□□□□ -1.63
HDAC6-212ENST00000461608 FBXO11Q86XK2 927 aa4.86□□□□□ -1.63
HDAC6-212ENST00000461608 RNF34Q969K3 372 aa4.86□□□□□ -1.63
HDAC6-212ENST00000461608 MEGF10Q96KG7 1140 aa4.86□□□□□ -1.63
HDAC6-212ENST00000461608 AKTIPQ9H8T0 292 aa4.86□□□□□ -1.63
HDAC6-212ENST00000461608 OAS3Q9Y6K5 1087 aaKnown RBP4.86□□□□□ -1.63
HDAC6-212ENST00000461608 GADD45BO75293 160 aaPredicted RBP4.85□□□□□ -1.63
HDAC6-212ENST00000461608 WNT11O96014 354 aa4.85□□□□□ -1.63
HDAC6-212ENST00000461608 ERCC5P28715 1186 aaPredicted RBP4.85□□□□□ -1.63
HDAC6-212ENST00000461608 ZNF76P36508 570 aa4.85□□□□□ -1.63
HDAC6-212ENST00000461608 NRLP54845 237 aa4.85□□□□□ -1.63
HDAC6-212ENST00000461608 HYAL2Q12891 473 aa4.85□□□□□ -1.63
HDAC6-212ENST00000461608 SF3A1Q15459 793 aaKnown RBP4.85□□□□□ -1.63
HDAC6-212ENST00000461608 PRPF40BQ6NWY9 871 aaKnown RBP4.85□□□□□ -1.63
HDAC6-212ENST00000461608 C1orf127Q8N9H9 656 aa4.85□□□□□ -1.63
HDAC6-212ENST00000461608 TRPM4Q8TD43 1214 aa4.85□□□□□ -1.63
HDAC6-212ENST00000461608 ANKRD24Q8TF21 1146 aa4.85□□□□□ -1.63
HDAC6-212ENST00000461608 FAM161BQ96MY7 647 aa4.85□□□□□ -1.63
HDAC6-212ENST00000461608 STOML1Q9UBI4 398 aa4.85□□□□□ -1.63
HDAC6-212ENST00000461608 PPM1HQ9ULR3 514 aa4.85□□□□□ -1.63
HDAC6-212ENST00000461608 EREGO14944 169 aa4.84□□□□□ -1.63
HDAC6-212ENST00000461608 IGLV1-40P01703 118 aa4.84□□□□□ -1.63
HDAC6-212ENST00000461608 GPLD1P80108 840 aa4.84□□□□□ -1.63
HDAC6-212ENST00000461608 FANCCQ00597 558 aa4.84□□□□□ -1.63
HDAC6-212ENST00000461608 HS2ST1Q7LGA3 356 aa4.84□□□□□ -1.63
HDAC6-212ENST00000461608 SPACA7Q96KW9 195 aa4.84□□□□□ -1.63
HDAC6-212ENST00000461608 SETDB2Q96T68 719 aa4.84□□□□□ -1.63
HDAC6-212ENST00000461608 TGIF2Q9GZN2 237 aa4.84□□□□□ -1.63
HDAC6-212ENST00000461608 MRPL18Q9H0U6 180 aaKnown RBP4.84□□□□□ -1.63
HDAC6-212ENST00000461608 SMG9Q9H0W8 520 aaKnown RBP4.84□□□□□ -1.63
HDAC6-212ENST00000461608 RBSNQ9H1K0 784 aa4.84□□□□□ -1.63
HDAC6-212ENST00000461608 TLR7Q9NYK1 1049 aaKnown RBP4.84□□□□□ -1.63
HDAC6-212ENST00000461608 RAXQ9Y2V3 346 aa4.84□□□□□ -1.63
HDAC6-212ENST00000461608 J3QW42 95 aa4.83□□□□□ -1.64
HDAC6-212ENST00000461608 MMP20O60882 483 aa4.83□□□□□ -1.64
HDAC6-212ENST00000461608 ALX3O95076 343 aa4.83□□□□□ -1.64
HDAC6-212ENST00000461608 USP17L7P0C7H9 530 aa4.83□□□□□ -1.64
HDAC6-212ENST00000461608 HDLBPQ00341 1268 aaKnown RBP4.83□□□□□ -1.64
HDAC6-212ENST00000461608 PTPN12Q05209 780 aaKnown RBP4.83□□□□□ -1.64
HDAC6-212ENST00000461608 USPL1Q5W0Q7 1092 aa4.83□□□□□ -1.64
HDAC6-212ENST00000461608 ELMSAN1Q6PJG2 1045 aa4.83□□□□□ -1.64
HDAC6-212ENST00000461608 ADAMTSL4Q6UY14 1074 aa4.83□□□□□ -1.64
HDAC6-212ENST00000461608 NCAPG2Q86XI2 1143 aa4.83□□□□□ -1.64
HDAC6-212ENST00000461608 EPS8L3Q8TE67 593 aaKnown RBP4.83□□□□□ -1.64
HDAC6-212ENST00000461608 BCO2Q9BYV7 579 aa4.83□□□□□ -1.64
HDAC6-212ENST00000461608 EHD4Q9H223 541 aa4.83□□□□□ -1.64
HDAC6-212ENST00000461608 FRRS1LQ9P0K9 344 aa4.83□□□□□ -1.64
HDAC6-212ENST00000461608 CNTN3Q9P232 1028 aa4.83□□□□□ -1.64
HDAC6-212ENST00000461608 SALL4Q9UJQ4 1053 aa4.83□□□□□ -1.64
HDAC6-212ENST00000461608 USP31Q70CQ4 1352 aa4.82□□□□□ -1.64
HDAC6-212ENST00000461608 KIAA1324LA8MWY0 1029 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms