RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 IKBKEQ14164 716 aa7.82□□□□□ -1.16
COL21A1-205ENST00000461489 HGSNATQ68CP4 663 aa7.82□□□□□ -1.16
COL21A1-205ENST00000461489 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.82□□□□□ -1.16
COL21A1-205ENST00000461489 BEND4Q6ZU67 534 aa7.82□□□□□ -1.16
COL21A1-205ENST00000461489 CLEC10AQ8IUN9 316 aa7.82□□□□□ -1.16
COL21A1-205ENST00000461489 FOXD3Q9UJU5 478 aaPredicted RBP7.82□□□□□ -1.16
COL21A1-205ENST00000461489 GTF3C3Q9Y5Q9 886 aa7.82□□□□□ -1.16
COL21A1-205ENST00000461489 KRTAP9-6A0A140TA67 174 aa7.81□□□□□ -1.16
COL21A1-205ENST00000461489 MED26O95402 600 aa7.81□□□□□ -1.16
COL21A1-205ENST00000461489 ABL1P00519 1130 aa7.81□□□□□ -1.16
COL21A1-205ENST00000461489 NPR3P17342 541 aa7.81□□□□□ -1.16
COL21A1-205ENST00000461489 GRIK1P39086 918 aa7.81□□□□□ -1.16
COL21A1-205ENST00000461489 SF3B2Q13435 895 aaKnown RBP7.81□□□□□ -1.16
COL21A1-205ENST00000461489 ASAP3Q8TDY4 903 aa7.81□□□□□ -1.16
COL21A1-205ENST00000461489 FAM83CQ9BQN1 747 aa7.81□□□□□ -1.16
COL21A1-205ENST00000461489 USP26Q9BXU7 913 aa7.81□□□□□ -1.16
COL21A1-205ENST00000461489 KIAA1324LA8MWY0 1029 aaPredicted RBP7.8□□□□□ -1.16
COL21A1-205ENST00000461489 SOX1O00570 391 aaPredicted RBP7.8□□□□□ -1.16
COL21A1-205ENST00000461489 VN1R5Q7Z5H4 357 aa7.8□□□□□ -1.16
COL21A1-205ENST00000461489 HIF3AQ9Y2N7 669 aa7.8□□□□□ -1.16
COL21A1-205ENST00000461489 FZD6O60353 706 aa7.79□□□□□ -1.16
COL21A1-205ENST00000461489 FKBP4Q02790 459 aaKnown RBP eCLIP7.79□□□□□ -1.16
COL21A1-205ENST00000461489 NUTM2GQ5VZR2 741 aa7.79□□□□□ -1.16
COL21A1-205ENST00000461489 MCTP1Q6DN14 999 aa7.79□□□□□ -1.16
COL21A1-205ENST00000461489 INTS5Q6P9B9 1019 aaKnown RBP7.79□□□□□ -1.16
COL21A1-205ENST00000461489 ANO2Q9NQ90 1003 aa7.79□□□□□ -1.16
COL21A1-205ENST00000461489 AMOTL2Q9Y2J4 779 aa7.79□□□□□ -1.16
COL21A1-205ENST00000461489 CARNS1A5YM72 827 aa7.78□□□□□ -1.16
COL21A1-205ENST00000461489 MEGF11A6BM72 1044 aa7.78□□□□□ -1.16
COL21A1-205ENST00000461489 ZNF211Q13398 564 aaPredicted RBP7.78□□□□□ -1.16
COL21A1-205ENST00000461489 SHKBP1Q8TBC3 707 aa7.78□□□□□ -1.16
COL21A1-205ENST00000461489 BHLHE41Q9C0J9 482 aaPredicted RBP7.78□□□□□ -1.16
COL21A1-205ENST00000461489 LATS2Q9NRM7 1088 aa7.78□□□□□ -1.16
COL21A1-205ENST00000461489 CCDC87Q9NVE4 849 aa7.78□□□□□ -1.16
COL21A1-205ENST00000461489 MAP4P27816 1152 aaKnown RBP7.77□□□□□ -1.17
COL21A1-205ENST00000461489 RXRBP28702 533 aa7.77□□□□□ -1.17
COL21A1-205ENST00000461489 PHLDB3Q6NSJ2 640 aa7.77□□□□□ -1.17
COL21A1-205ENST00000461489 GJD3Q8N144 294 aa7.77□□□□□ -1.17
COL21A1-205ENST00000461489 C12orf50Q8NA57 414 aaPredicted RBP7.77□□□□□ -1.17
COL21A1-205ENST00000461489 LOC100289279A0A1B0GTE1 492 aa7.76□□□□□ -1.17
COL21A1-205ENST00000461489 PRR19A6NJB7 356 aa7.76□□□□□ -1.17
COL21A1-205ENST00000461489 WDR64B1ANS9 1081 aa7.76□□□□□ -1.17
COL21A1-205ENST00000461489 ESRRAP11474 423 aaPredicted RBP7.76□□□□□ -1.17
COL21A1-205ENST00000461489 IRAK1P51617 712 aa7.76□□□□□ -1.17
COL21A1-205ENST00000461489 GP2P55259 537 aaKnown RBP7.76□□□□□ -1.17
COL21A1-205ENST00000461489 SGO2Q562F6 1265 aa7.76□□□□□ -1.17
COL21A1-205ENST00000461489 PEAR1Q5VY43 1037 aaPredicted RBP7.76□□□□□ -1.17
COL21A1-205ENST00000461489 TMPRSS13Q9BYE2 586 aa7.76□□□□□ -1.17
COL21A1-205ENST00000461489 SOX17Q9H6I2 414 aaPredicted RBP7.76□□□□□ -1.17
COL21A1-205ENST00000461489 ZFYVE28Q9HCC9 887 aa7.76□□□□□ -1.17
COL21A1-205ENST00000461489 CYP4F12Q9HCS2 524 aa7.76□□□□□ -1.17
COL21A1-205ENST00000461489 POLR3DP05423 398 aaPredicted RBP7.75□□□□□ -1.17
COL21A1-205ENST00000461489 SPINK2P20155 84 aa7.75□□□□□ -1.17
COL21A1-205ENST00000461489 GSTM4Q03013 218 aa7.75□□□□□ -1.17
COL21A1-205ENST00000461489 SMG8Q8ND04 991 aaKnown RBP7.75□□□□□ -1.17
COL21A1-205ENST00000461489 MFSD14AQ96MC6 490 aa7.75□□□□□ -1.17
COL21A1-205ENST00000461489 C1orf115Q9H7X2 142 aa7.75□□□□□ -1.17
COL21A1-205ENST00000461489 METTL12A8MUP2 240 aa7.74□□□□□ -1.17
COL21A1-205ENST00000461489 GIMAP7Q8NHV1 300 aa7.74□□□□□ -1.17
COL21A1-205ENST00000461489 SUGCTQ9HAC7 445 aa7.74□□□□□ -1.17
COL21A1-205ENST00000461489 OAS3Q9Y6K5 1087 aaKnown RBP7.74□□□□□ -1.17
COL21A1-205ENST00000461489 COL17A1Q9UMD9 1497 aaPredicted RBP7.74□□□□□ -1.17
COL21A1-205ENST00000461489 TIAF1O95411 115 aa7.73□□□□□ -1.17
COL21A1-205ENST00000461489 DLGAP3O95886 979 aa7.73□□□□□ -1.17
COL21A1-205ENST00000461489 USP11P51784 963 aa7.73□□□□□ -1.17
COL21A1-205ENST00000461489 DTX1Q86Y01 620 aa7.73□□□□□ -1.17
COL21A1-205ENST00000461489 FBXL6Q8N531 539 aa7.73□□□□□ -1.17
COL21A1-205ENST00000461489 ATG3Q9NT62 314 aa7.73□□□□□ -1.17
COL21A1-205ENST00000461489 EIF4EBP3O60516 100 aaPredicted RBP7.72□□□□□ -1.17
COL21A1-205ENST00000461489 EXOSC6Q5RKV6 272 aaKnown RBP7.72□□□□□ -1.17
COL21A1-205ENST00000461489 B4GALNT3Q6L9W6 998 aa7.72□□□□□ -1.17
COL21A1-205ENST00000461489 FAM95CA0A1B0GW59 222 aa7.71□□□□□ -1.18
COL21A1-205ENST00000461489 A0A1W2PP55 124 aa7.71□□□□□ -1.18
COL21A1-205ENST00000461489 PAX4O43316 350 aa7.71□□□□□ -1.18
COL21A1-205ENST00000461489 ADAMTS4O75173 837 aa7.71□□□□□ -1.18
COL21A1-205ENST00000461489 WNT11O96014 354 aa7.71□□□□□ -1.18
COL21A1-205ENST00000461489 DRD2P14416 443 aa7.71□□□□□ -1.18
COL21A1-205ENST00000461489 PCDH1Q08174 1060 aa7.71□□□□□ -1.18
COL21A1-205ENST00000461489 NFKBIBQ15653 356 aa7.71□□□□□ -1.18
COL21A1-205ENST00000461489 PAOXQ6QHF9 649 aa7.71□□□□□ -1.18
COL21A1-205ENST00000461489 LIN7BQ9HAP6 207 aa7.71□□□□□ -1.18
COL21A1-205ENST00000461489 PIM2Q9P1W9 311 aa7.71□□□□□ -1.18
COL21A1-205ENST00000461489 BRPF3Q9ULD4 1205 aa7.71□□□□□ -1.18
COL21A1-205ENST00000461489 A0A096LPE4 126 aa7.7□□□□□ -1.18
COL21A1-205ENST00000461489 A0A1W2PPZ6 126 aa7.7□□□□□ -1.18
COL21A1-205ENST00000461489 H3BRB1 525 aa7.7□□□□□ -1.18
COL21A1-205ENST00000461489 ICMTO60725 284 aa7.7□□□□□ -1.18
COL21A1-205ENST00000461489 CCNJLQ8IV13 435 aa7.7□□□□□ -1.18
COL21A1-205ENST00000461489 GLYCTKQ8IVS8 523 aa7.7□□□□□ -1.18
COL21A1-205ENST00000461489 GALNT12Q8IXK2 581 aa7.7□□□□□ -1.18
COL21A1-205ENST00000461489 FBLIM1Q8WUP2 373 aa7.7□□□□□ -1.18
COL21A1-205ENST00000461489 KRTAP4-12Q9BQ66 201 aa7.7□□□□□ -1.18
COL21A1-205ENST00000461489 OSBPL1AQ9BXW6 950 aa7.7□□□□□ -1.18
COL21A1-205ENST00000461489 CLEC4MQ9H2X3 399 aaPredicted RBP7.7□□□□□ -1.18
COL21A1-205ENST00000461489 TUT1Q9H6E5 874 aaKnown RBP7.7□□□□□ -1.18
COL21A1-205ENST00000461489 EGFL7Q9UHF1 273 aa7.7□□□□□ -1.18
COL21A1-205ENST00000461489 LEMD3Q9Y2U8 911 aa7.7□□□□□ -1.18
COL21A1-205ENST00000461489 F13BP05160 661 aa7.69□□□□□ -1.18
COL21A1-205ENST00000461489 HOXA10P31260 410 aaPredicted RBP7.69□□□□□ -1.18
COL21A1-205ENST00000461489 SOX4Q06945 474 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms