RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 SEC31BQ9NQW1 1179 aa11.14□□□□□ -0.63
HDAC9-220ENST00000461409 HCSTQ9UBK5 93 aa11.14□□□□□ -0.63
HDAC9-220ENST00000461409 GGA1Q9UJY5 639 aa11.14□□□□□ -0.63
HDAC9-220ENST00000461409 PCDHGA10Q9Y5H3 936 aa11.14□□□□□ -0.63
HDAC9-220ENST00000461409 TLL2Q9Y6L7 1015 aa11.14□□□□□ -0.63
HDAC9-220ENST00000461409 TAF1P21675 1872 aa11.13□□□□□ -0.63
HDAC9-220ENST00000461409 PI4KAP2A4QPH2 592 aa11.13□□□□□ -0.63
HDAC9-220ENST00000461409 ANP32CO43423 234 aa11.13□□□□□ -0.63
HDAC9-220ENST00000461409 CELF2O95319 508 aaKnown RBP11.13□□□□□ -0.63
HDAC9-220ENST00000461409 HIRAP54198 1017 aaPredicted RBP11.13□□□□□ -0.63
HDAC9-220ENST00000461409 CTSWP56202 376 aa11.13□□□□□ -0.63
HDAC9-220ENST00000461409 FMR1Q06787 632 aaKnown RBP eCLIP11.13□□□□□ -0.63
HDAC9-220ENST00000461409 ADGRD1Q6QNK2 874 aa11.13□□□□□ -0.63
HDAC9-220ENST00000461409 PI4KAP1Q8N8J0 262 aa11.13□□□□□ -0.63
HDAC9-220ENST00000461409 HHIPL1Q96JK4 782 aa11.13□□□□□ -0.63
HDAC9-220ENST00000461409 BEGAINQ9BUH8 593 aa11.13□□□□□ -0.63
HDAC9-220ENST00000461409 ADAM33Q9BZ11 813 aa11.13□□□□□ -0.63
HDAC9-220ENST00000461409 GLIS2Q9BZE0 524 aaPredicted RBP11.13□□□□□ -0.63
HDAC9-220ENST00000461409 MRS2Q9HD23 443 aa11.13□□□□□ -0.63
HDAC9-220ENST00000461409 XDHP47989 1333 aa11.12□□□□□ -0.63
HDAC9-220ENST00000461409 TK2O00142 265 aa11.12□□□□□ -0.63
HDAC9-220ENST00000461409 PLCB2Q00722 1185 aa11.12□□□□□ -0.63
HDAC9-220ENST00000461409 CCDC184Q52MB2 194 aa11.12□□□□□ -0.63
HDAC9-220ENST00000461409 SAPCD2Q86UD0 394 aa11.12□□□□□ -0.63
HDAC9-220ENST00000461409 GPR101Q96P66 508 aaPredicted RBP11.12□□□□□ -0.63
HDAC9-220ENST00000461409 PLA2G2EQ9NZK7 142 aa11.12□□□□□ -0.63
HDAC9-220ENST00000461409 RTL9Q8NET4 1388 aa11.12□□□□□ -0.63
HDAC9-220ENST00000461409 TRPM7Q96QT4 1865 aa11.11□□□□□ -0.63
HDAC9-220ENST00000461409 THSD7BQ9C0I4 1608 aa11.11□□□□□ -0.63
HDAC9-220ENST00000461409 SHTN1A0MZ66 631 aa11.11□□□□□ -0.63
HDAC9-220ENST00000461409 IGKV5-2P06315 115 aa11.11□□□□□ -0.63
HDAC9-220ENST00000461409 VIL1P09327 827 aaKnown RBP11.11□□□□□ -0.63
HDAC9-220ENST00000461409 MAP2K2P36507 400 aa11.11□□□□□ -0.63
HDAC9-220ENST00000461409 LBX1P52954 281 aa11.11□□□□□ -0.63
HDAC9-220ENST00000461409 GRM1Q13255 1194 aa11.11□□□□□ -0.63
HDAC9-220ENST00000461409 TBC1D10BQ4KMP7 808 aaPredicted RBP11.11□□□□□ -0.63
HDAC9-220ENST00000461409 CYP4F22Q6NT55 531 aa11.11□□□□□ -0.63
HDAC9-220ENST00000461409 SAMD7Q7Z3H4 446 aa11.11□□□□□ -0.63
HDAC9-220ENST00000461409 JARID2Q92833 1246 aaPredicted RBP11.11□□□□□ -0.63
HDAC9-220ENST00000461409 CCDC85AQ96PX6 553 aaPredicted RBP11.11□□□□□ -0.63
HDAC9-220ENST00000461409 ZNF408Q9H9D4 720 aa11.11□□□□□ -0.63
HDAC9-220ENST00000461409 COL4A1P02462 1669 aa11.11□□□□□ -0.63
HDAC9-220ENST00000461409 NEURL1BA8MQ27 555 aa11.1□□□□□ -0.63
HDAC9-220ENST00000461409 CA12O43570 354 aa11.1□□□□□ -0.63
HDAC9-220ENST00000461409 PTPREP23469 700 aa11.1□□□□□ -0.63
HDAC9-220ENST00000461409 ATP2B4P23634 1241 aa11.1□□□□□ -0.63
HDAC9-220ENST00000461409 KRT26Q7Z3Y9 468 aa11.1□□□□□ -0.63
HDAC9-220ENST00000461409 USP48Q86UV5 1035 aa11.1□□□□□ -0.63
HDAC9-220ENST00000461409 WDR63Q8IWG1 891 aa11.1□□□□□ -0.63
HDAC9-220ENST00000461409 AGBL3Q8NEM8 1001 aa11.1□□□□□ -0.63
HDAC9-220ENST00000461409 TTLL11Q8NHH1 800 aa11.1□□□□□ -0.63
HDAC9-220ENST00000461409 DCPSQ96C86 337 aaKnown RBP11.1□□□□□ -0.63
HDAC9-220ENST00000461409 MYH16Q9H6N6 1097 aa11.1□□□□□ -0.63
HDAC9-220ENST00000461409 BSDC1Q9NW68 430 aaPredicted RBP11.1□□□□□ -0.63
HDAC9-220ENST00000461409 FANCIQ9NVI1 1328 aa11.09□□□□□ -0.63
HDAC9-220ENST00000461409 ZNF609O15014 1411 aa11.09□□□□□ -0.63
HDAC9-220ENST00000461409 HRO43593 1189 aa11.09□□□□□ -0.63
HDAC9-220ENST00000461409 HSPA8P11142 646 aaKnown RBP11.09□□□□□ -0.63
HDAC9-220ENST00000461409 FLIIQ13045 1269 aa11.09□□□□□ -0.63
HDAC9-220ENST00000461409 FKBP5Q13451 457 aaPredicted RBP11.09□□□□□ -0.63
HDAC9-220ENST00000461409 CWF19L2Q2TBE0 894 aaKnown RBP11.09□□□□□ -0.63
HDAC9-220ENST00000461409 KIF4BQ2VIQ3 1234 aa11.09□□□□□ -0.63
HDAC9-220ENST00000461409 TYW1BQ6NUM6 668 aa11.09□□□□□ -0.63
HDAC9-220ENST00000461409 UBE3BQ7Z3V4 1068 aa11.09□□□□□ -0.63
HDAC9-220ENST00000461409 GREM2Q9H772 168 aa11.09□□□□□ -0.63
HDAC9-220ENST00000461409 KCNQ5Q9NR82 932 aa11.09□□□□□ -0.63
HDAC9-220ENST00000461409 MED23Q9ULK4 1368 aa11.08□□□□□ -0.64
HDAC9-220ENST00000461409 SPDYE16A6NNV3 312 aaPredicted RBP11.08□□□□□ -0.64
HDAC9-220ENST00000461409 H7C1W4 665 aa11.08□□□□□ -0.64
HDAC9-220ENST00000461409 EGFRP00533 1210 aa11.08□□□□□ -0.64
HDAC9-220ENST00000461409 IGHMBP2P38935 993 aaKnown RBP11.08□□□□□ -0.64
HDAC9-220ENST00000461409 BRPF1P55201 1214 aaPredicted RBP11.08□□□□□ -0.64
HDAC9-220ENST00000461409 ZNF280AP59817 542 aaPredicted RBP11.08□□□□□ -0.64
HDAC9-220ENST00000461409 GCKRQ14397 625 aa11.08□□□□□ -0.64
HDAC9-220ENST00000461409 RBM26Q5T8P6 1007 aaKnown RBP11.08□□□□□ -0.64
HDAC9-220ENST00000461409 RSBN1LQ6PCB5 846 aaPredicted RBP11.08□□□□□ -0.64
HDAC9-220ENST00000461409 G2E3Q7L622 706 aa11.08□□□□□ -0.64
HDAC9-220ENST00000461409 PODNQ7Z5L7 613 aa11.08□□□□□ -0.64
HDAC9-220ENST00000461409 SULF1Q8IWU6 871 aa11.08□□□□□ -0.64
HDAC9-220ENST00000461409 LINS1Q8NG48 757 aa11.08□□□□□ -0.64
HDAC9-220ENST00000461409 DNAAF4Q8WXU2 420 aa11.08□□□□□ -0.64
HDAC9-220ENST00000461409 FBXW7Q969H0 707 aa11.08□□□□□ -0.64
HDAC9-220ENST00000461409 USP17L3A6NCW0 530 aa11.07□□□□□ -0.64
HDAC9-220ENST00000461409 USP17L4A6NCW7 530 aa11.07□□□□□ -0.64
HDAC9-220ENST00000461409 AOC2O75106 756 aa11.07□□□□□ -0.64
HDAC9-220ENST00000461409 HUNKP57058 714 aa11.07□□□□□ -0.64
HDAC9-220ENST00000461409 NOGQ13253 232 aa11.07□□□□□ -0.64
HDAC9-220ENST00000461409 USP17L1Q7RTZ2 530 aa11.07□□□□□ -0.64
HDAC9-220ENST00000461409 C2orf69Q8N8R5 385 aa11.07□□□□□ -0.64
HDAC9-220ENST00000461409 PLA2G12BQ9BX93 195 aa11.07□□□□□ -0.64
HDAC9-220ENST00000461409 GGA3Q9NZ52 723 aa11.07□□□□□ -0.64
HDAC9-220ENST00000461409 MINPP1Q9UNW1 487 aa11.07□□□□□ -0.64
HDAC9-220ENST00000461409 ADM5C9JUS6 153 aa11.06□□□□□ -0.64
HDAC9-220ENST00000461409 USP17L8P0C7I0 530 aa11.06□□□□□ -0.64
HDAC9-220ENST00000461409 CCT4P50991 539 aaKnown RBP11.06□□□□□ -0.64
HDAC9-220ENST00000461409 MPHOSPH8Q99549 860 aa11.06□□□□□ -0.64
HDAC9-220ENST00000461409 EPAS1Q99814 870 aa11.06□□□□□ -0.64
HDAC9-220ENST00000461409 SLC4A5Q9BY07 1137 aa11.06□□□□□ -0.64
HDAC9-220ENST00000461409 ANKRD2Q9GZV1 360 aa11.06□□□□□ -0.64
HDAC9-220ENST00000461409 GBA2Q9HCG7 927 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms