RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 SSC5DA1L4H1 1573 aa22.12■■□□□ 1.13
TOP3A-202ENST00000461127 CCDC30Q5VVM6 783 aa22.11■■□□□ 1.13
TOP3A-202ENST00000461127 VEZTQ9HBM0 779 aa22.11■■□□□ 1.13
TOP3A-202ENST00000461127 TRIOBPQ9H2D6 2365 aa22.11■■□□□ 1.13
TOP3A-202ENST00000461127 ECM29Q5VYK3 1845 aa22.1■■□□□ 1.13
TOP3A-202ENST00000461127 TESPA1A2RU30 521 aaPredicted RBP22.1■■□□□ 1.13
TOP3A-202ENST00000461127 KLRK1P26718 216 aa22.1■■□□□ 1.13
TOP3A-202ENST00000461127 GNAI1P63096 354 aa22.1■■□□□ 1.13
TOP3A-202ENST00000461127 CALD1Q05682 793 aaKnown RBP22.1■■□□□ 1.13
TOP3A-202ENST00000461127 CD209Q9NNX6 404 aa22.1■■□□□ 1.13
TOP3A-202ENST00000461127 IFT57Q9NWB7 429 aa22.1■■□□□ 1.13
TOP3A-202ENST00000461127 CLRN2A0PK11 232 aa22.09■■□□□ 1.13
TOP3A-202ENST00000461127 ZNF853P0CG23 659 aa22.09■■□□□ 1.13
TOP3A-202ENST00000461127 GJA5P36382 358 aa22.09■■□□□ 1.13
TOP3A-202ENST00000461127 NBPF12Q5TAG4 269 aaPredicted RBP22.09■■□□□ 1.13
TOP3A-202ENST00000461127 KSR2Q6VAB6 950 aa22.09■■□□□ 1.13
TOP3A-202ENST00000461127 PTPN18Q99952 460 aa22.09■■□□□ 1.13
TOP3A-202ENST00000461127 SPDYE2BA6NHP3 402 aa22.08■■□□□ 1.13
TOP3A-202ENST00000461127 USP2O75604 605 aaPredicted RBP22.08■■□□□ 1.13
TOP3A-202ENST00000461127 IGKV5-2P06315 115 aa22.08■■□□□ 1.13
TOP3A-202ENST00000461127 SPDYE6P0CI01 402 aa22.08■■□□□ 1.13
TOP3A-202ENST00000461127 ITGA6P23229 1130 aa22.08■■□□□ 1.13
TOP3A-202ENST00000461127 CFAP100Q494V2 611 aa22.08■■□□□ 1.13
TOP3A-202ENST00000461127 ZFYVE28Q9HCC9 887 aa22.08■■□□□ 1.13
TOP3A-202ENST00000461127 PI4KAP2A4QPH2 592 aa22.07■■□□□ 1.12
TOP3A-202ENST00000461127 F8W031 263 aaPredicted RBP22.07■■□□□ 1.12
TOP3A-202ENST00000461127 UBE3BQ7Z3V4 1068 aa22.07■■□□□ 1.12
TOP3A-202ENST00000461127 PI4KAP1Q8N8J0 262 aa22.07■■□□□ 1.12
TOP3A-202ENST00000461127 OPTNQ96CV9 577 aa22.07■■□□□ 1.12
TOP3A-202ENST00000461127 PTCH2Q9Y6C5 1203 aa22.07■■□□□ 1.12
TOP3A-202ENST00000461127 WDHD1O75717 1129 aaPredicted RBP22.06■■□□□ 1.12
TOP3A-202ENST00000461127 RBM5P52756 815 aaKnown RBP eCLIP22.06■■□□□ 1.12
TOP3A-202ENST00000461127 TNFAIP1Q13829 316 aa22.06■■□□□ 1.12
TOP3A-202ENST00000461127 RASA3Q14644 834 aa22.06■■□□□ 1.12
TOP3A-202ENST00000461127 TAF1CQ15572 869 aaPredicted RBP22.06■■□□□ 1.12
TOP3A-202ENST00000461127 CERS5Q8N5B7 392 aa22.06■■□□□ 1.12
TOP3A-202ENST00000461127 ELP3Q9H9T3 547 aa22.06■■□□□ 1.12
TOP3A-202ENST00000461127 MYBBP1AQ9BQG0 1328 aaKnown RBP22.06■■□□□ 1.12
TOP3A-202ENST00000461127 H0YGN5 161 aa22.05■■□□□ 1.12
TOP3A-202ENST00000461127 CAP1Q01518 475 aa22.05■■□□□ 1.12
TOP3A-202ENST00000461127 CHRNDQ07001 517 aa22.05■■□□□ 1.12
TOP3A-202ENST00000461127 PRMT6Q96LA8 375 aaPredicted RBP22.05■■□□□ 1.12
TOP3A-202ENST00000461127 ADAMTS8Q9UP79 889 aa22.05■■□□□ 1.12
TOP3A-202ENST00000461127 PCDHAC2Q9Y5I4 1007 aa22.05■■□□□ 1.12
TOP3A-202ENST00000461127 NEURL1BA8MQ27 555 aa22.04■■□□□ 1.12
TOP3A-202ENST00000461127 FKBP1AP62942 108 aaKnown RBP22.04■■□□□ 1.12
TOP3A-202ENST00000461127 CWF19L2Q2TBE0 894 aaKnown RBP22.04■■□□□ 1.12
TOP3A-202ENST00000461127 ZNF804AQ7Z570 1209 aa22.04■■□□□ 1.12
TOP3A-202ENST00000461127 C8orf58Q8NAV2 365 aa22.04■■□□□ 1.12
TOP3A-202ENST00000461127 H7C1W4 665 aa22.03■■□□□ 1.12
TOP3A-202ENST00000461127 GTF2A2P52657 109 aa22.03■■□□□ 1.12
TOP3A-202ENST00000461127 KIF22Q14807 665 aa22.03■■□□□ 1.12
TOP3A-202ENST00000461127 OTUD5Q96G74 571 aa22.03■■□□□ 1.12
TOP3A-202ENST00000461127 MS4A4AQ96JQ5 239 aa22.03■■□□□ 1.12
TOP3A-202ENST00000461127 PLA2G12BQ9BX93 195 aa22.03■■□□□ 1.12
TOP3A-202ENST00000461127 STK31Q9BXU1 1019 aa22.03■■□□□ 1.12
TOP3A-202ENST00000461127 CCL15-CCL14A0A0B4J2E2 113 aa22.02■■□□□ 1.12
TOP3A-202ENST00000461127 MYCP01106 439 aaPredicted RBP22.02■■□□□ 1.12
TOP3A-202ENST00000461127 CCL15Q16663 113 aa22.02■■□□□ 1.12
TOP3A-202ENST00000461127 C15orf52Q6ZUT6 534 aaKnown RBP22.02■■□□□ 1.12
TOP3A-202ENST00000461127 BRI3BPQ8WY22 251 aa22.01■■□□□ 1.11
TOP3A-202ENST00000461127 ANKRD18BA2A2Z9 1011 aa22■■□□□ 1.11
TOP3A-202ENST00000461127 IL1R1P14778 569 aa22■■□□□ 1.11
TOP3A-202ENST00000461127 CHRDL2Q6WN34 429 aa22■■□□□ 1.11
TOP3A-202ENST00000461127 CSADQ9Y600 493 aa22■■□□□ 1.11
TOP3A-202ENST00000461127 OTOFQ9HC10 1997 aa21.99■■□□□ 1.11
TOP3A-202ENST00000461127 TAF5LO75529 589 aa21.99■■□□□ 1.11
TOP3A-202ENST00000461127 GNRH1P01148 92 aa21.99■■□□□ 1.11
TOP3A-202ENST00000461127 CSF1RP07333 972 aa21.99■■□□□ 1.11
TOP3A-202ENST00000461127 SH3TC2Q8TF17 1288 aa21.99■■□□□ 1.11
TOP3A-202ENST00000461127 MYH16Q9H6N6 1097 aa21.99■■□□□ 1.11
TOP3A-202ENST00000461127 SZT2Q5T011 3432 aa21.98■■□□□ 1.11
TOP3A-202ENST00000461127 SNAP23O00161 211 aa21.98■■□□□ 1.11
TOP3A-202ENST00000461127 MAP3K9P80192 1104 aa21.98■■□□□ 1.11
TOP3A-202ENST00000461127 GCKRQ14397 625 aa21.98■■□□□ 1.11
TOP3A-202ENST00000461127 DPF3Q92784 378 aa21.98■■□□□ 1.11
TOP3A-202ENST00000461127 PRMT2P55345 433 aa21.97■■□□□ 1.11
TOP3A-202ENST00000461127 SPDYE2Q495Y8 402 aa21.97■■□□□ 1.11
TOP3A-202ENST00000461127 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.97■■□□□ 1.11
TOP3A-202ENST00000461127 FAM43AQ8N2R8 423 aa21.97■■□□□ 1.11
TOP3A-202ENST00000461127 HELBQ8NG08 1087 aaPredicted RBP21.97■■□□□ 1.11
TOP3A-202ENST00000461127 ZNF70Q9UC06 446 aaPredicted RBP21.97■■□□□ 1.11
TOP3A-202ENST00000461127 AOX1Q06278 1338 aa21.97■■□□□ 1.11
TOP3A-202ENST00000461127 IRS2Q9Y4H2 1338 aa21.97■■□□□ 1.11
TOP3A-202ENST00000461127 APAF1O14727 1248 aa21.96■■□□□ 1.11
TOP3A-202ENST00000461127 TLR2O60603 784 aa21.96■■□□□ 1.11
TOP3A-202ENST00000461127 TNNI2P48788 182 aa21.96■■□□□ 1.11
TOP3A-202ENST00000461127 VGLL4Q14135 290 aa21.96■■□□□ 1.11
TOP3A-202ENST00000461127 CNKSR2Q8WXI2 1034 aa21.96■■□□□ 1.11
TOP3A-202ENST00000461127 JAG2Q9Y219 1238 aa21.96■■□□□ 1.11
TOP3A-202ENST00000461127 LACTBP83111 547 aaPredicted RBP21.95■■□□□ 1.1
TOP3A-202ENST00000461127 IFIT5Q13325 482 aaKnown RBP21.95■■□□□ 1.1
TOP3A-202ENST00000461127 TSPYL6Q8N831 410 aa21.95■■□□□ 1.1
TOP3A-202ENST00000461127 TDRD3Q9H7E2 651 aaKnown RBP21.95■■□□□ 1.1
TOP3A-202ENST00000461127 ZCCHC17Q9NP64 241 aaKnown RBP21.95■■□□□ 1.1
TOP3A-202ENST00000461127 SERPINA10Q9UK55 444 aa21.95■■□□□ 1.1
TOP3A-202ENST00000461127 CETPP11597 493 aa21.94■■□□□ 1.1
TOP3A-202ENST00000461127 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.94■■□□□ 1.1
TOP3A-202ENST00000461127 NKX2-3Q8TAU0 364 aa21.94■■□□□ 1.1
TOP3A-202ENST00000461127 RBM27Q9P2N5 1060 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms