RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 NBR1Q14596 966 aa13.63□□□□□ -0.23
APTX-209ENST00000460940 TNNI3KQ59H18 835 aa13.63□□□□□ -0.23
APTX-209ENST00000460940 FBXW7Q969H0 707 aa13.63□□□□□ -0.23
APTX-209ENST00000460940 KIF1BPQ96EK5 621 aa13.63□□□□□ -0.23
APTX-209ENST00000460940 ADARB2Q9NS39 739 aaKnown RBP13.63□□□□□ -0.23
APTX-209ENST00000460940 ZBTB12Q9Y330 459 aaPredicted RBP13.63□□□□□ -0.23
APTX-209ENST00000460940 FPGT-TNNI3KV9GXZ4 949 aa13.63□□□□□ -0.23
APTX-209ENST00000460940 H7C1D1 291 aa13.62□□□□□ -0.23
APTX-209ENST00000460940 MICALL2Q8IY33 904 aa13.62□□□□□ -0.23
APTX-209ENST00000460940 XAGE2Q96GT9 111 aa13.62□□□□□ -0.23
APTX-209ENST00000460940 GMLQ99445 158 aa13.62□□□□□ -0.23
APTX-209ENST00000460940 CNOT7Q9UIV1 285 aaKnown RBP13.62□□□□□ -0.23
APTX-209ENST00000460940 PCDHB15Q9Y5E8 787 aa13.62□□□□□ -0.23
APTX-209ENST00000460940 FRAT2O75474 233 aaPredicted RBP13.61□□□□□ -0.23
APTX-209ENST00000460940 TOMM70O94826 608 aa13.61□□□□□ -0.23
APTX-209ENST00000460940 ADORA1P30542 326 aa13.61□□□□□ -0.23
APTX-209ENST00000460940 TIMM10P62072 90 aa13.61□□□□□ -0.23
APTX-209ENST00000460940 USP50Q70EL3 339 aaPredicted RBP13.61□□□□□ -0.23
APTX-209ENST00000460940 RBM46Q8TBY0 533 aaKnown RBP13.61□□□□□ -0.23
APTX-209ENST00000460940 RHPN1Q8TCX5 695 aa13.61□□□□□ -0.23
APTX-209ENST00000460940 TBC1D22AQ8WUA7 517 aa13.61□□□□□ -0.23
APTX-209ENST00000460940 PDS5AQ29RF7 1337 aaKnown RBP13.61□□□□□ -0.23
APTX-209ENST00000460940 USP17L8P0C7I0 530 aa13.61□□□□□ -0.23
APTX-209ENST00000460940 EPS15P42566 896 aa13.61□□□□□ -0.23
APTX-209ENST00000460940 ZNF280AP59817 542 aaPredicted RBP13.61□□□□□ -0.23
APTX-209ENST00000460940 CCDC102BQ68D86 513 aa13.61□□□□□ -0.23
APTX-209ENST00000460940 PKNOX2Q96KN3 472 aa13.61□□□□□ -0.23
APTX-209ENST00000460940 NEUROD6Q96NK8 337 aa13.61□□□□□ -0.23
APTX-209ENST00000460940 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.61□□□□□ -0.23
APTX-209ENST00000460940 PHKA1P46020 1223 aa13.6□□□□□ -0.23
APTX-209ENST00000460940 GORABQ5T7V8 394 aa13.6□□□□□ -0.23
APTX-209ENST00000460940 LDHDQ86WU2 507 aa13.6□□□□□ -0.23
APTX-209ENST00000460940 IL27Q8NEV9 243 aa13.6□□□□□ -0.23
APTX-209ENST00000460940 EXOC6Q8TAG9 804 aa13.6□□□□□ -0.23
APTX-209ENST00000460940 ADAMTSL1Q8N6G6 1762 aa13.59□□□□□ -0.23
APTX-209ENST00000460940 HDAC1Q13547 482 aaPredicted RBP13.59□□□□□ -0.23
APTX-209ENST00000460940 MFSD14BQ5SR56 506 aa13.59□□□□□ -0.23
APTX-209ENST00000460940 CLASRPQ8N2M8 674 aaKnown RBP13.59□□□□□ -0.23
APTX-209ENST00000460940 OGFOD1Q8N543 542 aa13.59□□□□□ -0.23
APTX-209ENST00000460940 WDR66Q8TBY9 1149 aa13.59□□□□□ -0.23
APTX-209ENST00000460940 CCDC136Q96JN2 1154 aa13.59□□□□□ -0.23
APTX-209ENST00000460940 IPO9Q96P70 1041 aaKnown RBP13.59□□□□□ -0.23
APTX-209ENST00000460940 DCTPP1Q9H773 170 aa13.59□□□□□ -0.23
APTX-209ENST00000460940 DENND2AQ9ULE3 1009 aa13.59□□□□□ -0.23
APTX-209ENST00000460940 COL1A1P02452 1464 aaPredicted RBP13.59□□□□□ -0.23
APTX-209ENST00000460940 UQCRFS1P1P0C7P4 283 aa13.59□□□□□ -0.23
APTX-209ENST00000460940 FSTL1Q12841 308 aa13.59□□□□□ -0.23
APTX-209ENST00000460940 EAPPQ56P03 285 aaPredicted RBP13.59□□□□□ -0.23
APTX-209ENST00000460940 CERS5Q8N5B7 392 aa13.59□□□□□ -0.23
APTX-209ENST00000460940 SMC1BQ8NDV3 1235 aa13.59□□□□□ -0.23
APTX-209ENST00000460940 MXD3Q9BW11 206 aa13.59□□□□□ -0.23
APTX-209ENST00000460940 HDAC9Q9UKV0 1011 aa13.59□□□□□ -0.23
APTX-209ENST00000460940 IQSEC3Q9UPP2 1182 aaPredicted RBP13.59□□□□□ -0.23
APTX-209ENST00000460940 SUGT1Q9Y2Z0 365 aa13.59□□□□□ -0.23
APTX-209ENST00000460940 ARID4AP29374 1257 aaPredicted RBP13.58□□□□□ -0.24
APTX-209ENST00000460940 CHAF1AQ13111 956 aaPredicted RBP13.58□□□□□ -0.24
APTX-209ENST00000460940 CCDC158Q5M9N0 1113 aa13.58□□□□□ -0.24
APTX-209ENST00000460940 AACSQ86V21 672 aa13.58□□□□□ -0.24
APTX-209ENST00000460940 EAF2Q96CJ1 260 aaPredicted RBP13.58□□□□□ -0.24
APTX-209ENST00000460940 ZNF512BQ96KM6 892 aaPredicted RBP13.58□□□□□ -0.24
APTX-209ENST00000460940 DBNDD2Q9BQY9 259 aa13.58□□□□□ -0.24
APTX-209ENST00000460940 LRRCC1Q9C099 1032 aa13.58□□□□□ -0.24
APTX-209ENST00000460940 MYH13Q9UKX3 1938 aa13.58□□□□□ -0.24
APTX-209ENST00000460940 SALL1Q9NSC2 1324 aa13.58□□□□□ -0.24
APTX-209ENST00000460940 ANP32AP39687 249 aaKnown RBP13.57□□□□□ -0.24
APTX-209ENST00000460940 RASGRF1Q13972 1273 aa13.57□□□□□ -0.24
APTX-209ENST00000460940 KIF4BQ2VIQ3 1234 aa13.57□□□□□ -0.24
APTX-209ENST00000460940 CHADLQ6NUI6 762 aa13.57□□□□□ -0.24
APTX-209ENST00000460940 KIAA0825Q8IV33 1275 aa13.57□□□□□ -0.24
APTX-209ENST00000460940 TRPM4Q8TD43 1214 aa13.57□□□□□ -0.24
APTX-209ENST00000460940 ZC3H15Q8WU90 426 aaKnown RBP13.57□□□□□ -0.24
APTX-209ENST00000460940 MYOZ2Q9NPC6 264 aa13.57□□□□□ -0.24
APTX-209ENST00000460940 DBNLQ9UJU6 430 aaKnown RBP13.57□□□□□ -0.24
APTX-209ENST00000460940 JAG2Q9Y219 1238 aa13.57□□□□□ -0.24
APTX-209ENST00000460940 SHTN1A0MZ66 631 aa13.57□□□□□ -0.24
APTX-209ENST00000460940 APBB1O00213 710 aa13.57□□□□□ -0.24
APTX-209ENST00000460940 ZGPATQ8N5A5 531 aaKnown RBP13.57□□□□□ -0.24
APTX-209ENST00000460940 IL1RAPL2Q9NP60 686 aa13.57□□□□□ -0.24
APTX-209ENST00000460940 MAST3O60307 1309 aa13.56□□□□□ -0.24
APTX-209ENST00000460940 TBC1D10BQ4KMP7 808 aaPredicted RBP13.56□□□□□ -0.24
APTX-209ENST00000460940 TTC39AQ5SRH9 613 aa13.56□□□□□ -0.24
APTX-209ENST00000460940 GCC1Q96CN9 775 aa13.56□□□□□ -0.24
APTX-209ENST00000460940 IFIT2P09913 472 aaKnown RBP13.55□□□□□ -0.24
APTX-209ENST00000460940 POTEIP0CG38 1075 aa13.55□□□□□ -0.24
APTX-209ENST00000460940 POTEJP0CG39 1038 aa13.55□□□□□ -0.24
APTX-209ENST00000460940 SAMD7Q7Z3H4 446 aa13.55□□□□□ -0.24
APTX-209ENST00000460940 MTMR14Q8NCE2 650 aa13.55□□□□□ -0.24
APTX-209ENST00000460940 CCDC8Q9H0W5 538 aaPredicted RBP13.55□□□□□ -0.24
APTX-209ENST00000460940 RWDD1Q9H446 243 aaPredicted RBP13.55□□□□□ -0.24
APTX-209ENST00000460940 TLR7Q9NYK1 1049 aaKnown RBP13.55□□□□□ -0.24
APTX-209ENST00000460940 PGAP2Q9UHJ9 254 aa13.55□□□□□ -0.24
APTX-209ENST00000460940 CLEC11AQ9Y240 323 aa13.55□□□□□ -0.24
APTX-209ENST00000460940 HIRAP54198 1017 aaPredicted RBP13.55□□□□□ -0.24
APTX-209ENST00000460940 IRX6P78412 446 aaPredicted RBP13.55□□□□□ -0.24
APTX-209ENST00000460940 HDLBPQ00341 1268 aaKnown RBP13.55□□□□□ -0.24
APTX-209ENST00000460940 SPATA5Q8NB90 893 aa13.55□□□□□ -0.24
APTX-209ENST00000460940 HMG20BQ9P0W2 317 aa13.55□□□□□ -0.24
APTX-209ENST00000460940 SERPINA10Q9UK55 444 aa13.55□□□□□ -0.24
APTX-209ENST00000460940 TTF2Q9UNY4 1162 aaKnown RBP13.55□□□□□ -0.24
APTX-209ENST00000460940 C1QTNF8P60827 252 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms