RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 TAF1P21675 1872 aa9.33□□□□□ -0.92
ABCA4-202ENST00000460514 SLX4Q8IY92 1834 aa9.33□□□□□ -0.92
ABCA4-202ENST00000460514 BRCA1P38398 1863 aaKnown RBP9.32□□□□□ -0.92
ABCA4-202ENST00000460514 LRRC37AA6NMS7 1700 aa9.32□□□□□ -0.92
ABCA4-202ENST00000460514 C21orf2O43822 256 aa9.32□□□□□ -0.92
ABCA4-202ENST00000460514 SASH1O94885 1247 aa9.32□□□□□ -0.92
ABCA4-202ENST00000460514 IFIT2P09913 472 aaKnown RBP9.32□□□□□ -0.92
ABCA4-202ENST00000460514 ATP2B3Q16720 1220 aa9.32□□□□□ -0.92
ABCA4-202ENST00000460514 C7orf43Q8WVR3 580 aa9.32□□□□□ -0.92
ABCA4-202ENST00000460514 LPIN2Q92539 896 aa9.32□□□□□ -0.92
ABCA4-202ENST00000460514 GPATCH3Q96I76 525 aa9.32□□□□□ -0.92
ABCA4-202ENST00000460514 ZNF804BA4D1E1 1349 aa9.31□□□□□ -0.92
ABCA4-202ENST00000460514 KDM2BQ8NHM5 1336 aa9.31□□□□□ -0.92
ABCA4-202ENST00000460514 C6orf229H3BNL8 230 aa9.31□□□□□ -0.92
ABCA4-202ENST00000460514 UFL1O94874 794 aa9.31□□□□□ -0.92
ABCA4-202ENST00000460514 GPSM2P81274 684 aa9.31□□□□□ -0.92
ABCA4-202ENST00000460514 NUCB1Q02818 461 aa9.31□□□□□ -0.92
ABCA4-202ENST00000460514 TNNI3KQ59H18 835 aa9.31□□□□□ -0.92
ABCA4-202ENST00000460514 CAVIN4Q5BKX8 364 aa9.31□□□□□ -0.92
ABCA4-202ENST00000460514 GORABQ5T7V8 394 aa9.31□□□□□ -0.92
ABCA4-202ENST00000460514 AACSQ86V21 672 aa9.31□□□□□ -0.92
ABCA4-202ENST00000460514 CHD1LQ86WJ1 897 aa9.31□□□□□ -0.92
ABCA4-202ENST00000460514 VGLL2Q8N8G2 317 aa9.31□□□□□ -0.92
ABCA4-202ENST00000460514 HELBQ8NG08 1087 aaPredicted RBP9.31□□□□□ -0.92
ABCA4-202ENST00000460514 PSMD1Q99460 953 aa9.31□□□□□ -0.92
ABCA4-202ENST00000460514 VPS33BQ9H267 617 aa9.31□□□□□ -0.92
ABCA4-202ENST00000460514 FPGT-TNNI3KV9GXZ4 949 aa9.31□□□□□ -0.92
ABCA4-202ENST00000460514 ARFGEF1Q9Y6D6 1849 aa9.31□□□□□ -0.92
ABCA4-202ENST00000460514 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.3□□□□□ -0.92
ABCA4-202ENST00000460514 A0A1B0GUL7 405 aa9.3□□□□□ -0.92
ABCA4-202ENST00000460514 GRIN3BO60391 1043 aa9.3□□□□□ -0.92
ABCA4-202ENST00000460514 TAF5LO75529 589 aa9.3□□□□□ -0.92
ABCA4-202ENST00000460514 FKBP4Q02790 459 aaKnown RBP eCLIP9.3□□□□□ -0.92
ABCA4-202ENST00000460514 CCDC158Q5M9N0 1113 aa9.3□□□□□ -0.92
ABCA4-202ENST00000460514 C15orf52Q6ZUT6 534 aaKnown RBP9.3□□□□□ -0.92
ABCA4-202ENST00000460514 VPS37DQ86XT2 251 aa9.3□□□□□ -0.92
ABCA4-202ENST00000460514 TBC1D16Q8TBP0 767 aa9.3□□□□□ -0.92
ABCA4-202ENST00000460514 ZFP91Q96JP5 570 aaPredicted RBP9.3□□□□□ -0.92
ABCA4-202ENST00000460514 NEUROD6Q96NK8 337 aa9.3□□□□□ -0.92
ABCA4-202ENST00000460514 RTFDC1Q9BY42 306 aaPredicted RBP9.3□□□□□ -0.92
ABCA4-202ENST00000460514 ZC3H12CQ9C0D7 883 aaKnown RBP9.3□□□□□ -0.92
ABCA4-202ENST00000460514 TAOK3Q9H2K8 898 aa9.3□□□□□ -0.92
ABCA4-202ENST00000460514 IL1RAPL2Q9NP60 686 aa9.3□□□□□ -0.92
ABCA4-202ENST00000460514 GNL3LQ9NVN8 582 aaKnown RBP9.3□□□□□ -0.92
ABCA4-202ENST00000460514 ZNF609O15014 1411 aa9.3□□□□□ -0.92
ABCA4-202ENST00000460514 LTBP3Q9NS15 1303 aa9.3□□□□□ -0.92
ABCA4-202ENST00000460514 COL4A1P02462 1669 aa9.29□□□□□ -0.92
ABCA4-202ENST00000460514 MED23Q9ULK4 1368 aa9.29□□□□□ -0.92
ABCA4-202ENST00000460514 FGFR2P21802 821 aa9.29□□□□□ -0.92
ABCA4-202ENST00000460514 GPR162Q16538 588 aa9.29□□□□□ -0.92
ABCA4-202ENST00000460514 WASHC4Q2M389 1173 aa9.29□□□□□ -0.92
ABCA4-202ENST00000460514 ZNF804AQ7Z570 1209 aa9.29□□□□□ -0.92
ABCA4-202ENST00000460514 LNPKQ9C0E8 428 aa9.29□□□□□ -0.92
ABCA4-202ENST00000460514 BCL11AQ9H165 835 aa9.29□□□□□ -0.92
ABCA4-202ENST00000460514 WWC3Q9ULE0 1092 aa9.29□□□□□ -0.92
ABCA4-202ENST00000460514 A0A1B0GUL6 1792 aa9.29□□□□□ -0.92
ABCA4-202ENST00000460514 ERC2O15083 957 aa9.28□□□□□ -0.92
ABCA4-202ENST00000460514 SMARCA5O60264 1052 aaPredicted RBP9.28□□□□□ -0.92
ABCA4-202ENST00000460514 UQCRFS1P1P0C7P4 283 aa9.28□□□□□ -0.92
ABCA4-202ENST00000460514 HIBADHP31937 336 aaKnown RBP9.28□□□□□ -0.92
ABCA4-202ENST00000460514 TIMM10P62072 90 aa9.28□□□□□ -0.92
ABCA4-202ENST00000460514 ARHGAP27Q6ZUM4 889 aa9.28□□□□□ -0.92
ABCA4-202ENST00000460514 EAF2Q96CJ1 260 aaPredicted RBP9.28□□□□□ -0.92
ABCA4-202ENST00000460514 XAGE2Q96GT9 111 aa9.28□□□□□ -0.92
ABCA4-202ENST00000460514 POLLQ9UGP5 575 aa9.28□□□□□ -0.92
ABCA4-202ENST00000460514 TTC41PQ6P2S7 1318 aa9.28□□□□□ -0.92
ABCA4-202ENST00000460514 SEMA3EO15041 775 aa9.27□□□□□ -0.93
ABCA4-202ENST00000460514 PPIP5K2O43314 1243 aa9.27□□□□□ -0.93
ABCA4-202ENST00000460514 FRAT2O75474 233 aaPredicted RBP9.27□□□□□ -0.93
ABCA4-202ENST00000460514 MX1P20591 662 aa9.27□□□□□ -0.93
ABCA4-202ENST00000460514 KIAA2012Q0VF49 1180 aa9.27□□□□□ -0.93
ABCA4-202ENST00000460514 TTC39AQ5SRH9 613 aa9.27□□□□□ -0.93
ABCA4-202ENST00000460514 OLFM4Q6UX06 510 aa9.27□□□□□ -0.93
ABCA4-202ENST00000460514 DBNDD2Q9BQY9 259 aa9.27□□□□□ -0.93
ABCA4-202ENST00000460514 COA1Q9GZY4 146 aa9.27□□□□□ -0.93
ABCA4-202ENST00000460514 CCDC8Q9H0W5 538 aaPredicted RBP9.27□□□□□ -0.93
ABCA4-202ENST00000460514 ECHDC1Q9NTX5 307 aa9.27□□□□□ -0.93
ABCA4-202ENST00000460514 SNED1Q8TER0 1413 aa9.27□□□□□ -0.93
ABCA4-202ENST00000460514 LTBP1Q14766 1721 aa9.27□□□□□ -0.93
ABCA4-202ENST00000460514 ARAP2Q8WZ64 1704 aa9.27□□□□□ -0.93
ABCA4-202ENST00000460514 FER1L6Q2WGJ9 1857 aa9.27□□□□□ -0.93
ABCA4-202ENST00000460514 AOX1Q06278 1338 aa9.27□□□□□ -0.93
ABCA4-202ENST00000460514 GLRX3O76003 335 aaKnown RBP9.26□□□□□ -0.93
ABCA4-202ENST00000460514 IARSP41252 1262 aaKnown RBP9.26□□□□□ -0.93
ABCA4-202ENST00000460514 CCDC102BQ68D86 513 aa9.26□□□□□ -0.93
ABCA4-202ENST00000460514 FBXO33Q7Z6M2 555 aa9.26□□□□□ -0.93
ABCA4-202ENST00000460514 NIM1KQ8IY84 436 aa9.26□□□□□ -0.93
ABCA4-202ENST00000460514 LARGE2Q8N3Y3 721 aa9.26□□□□□ -0.93
ABCA4-202ENST00000460514 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.26□□□□□ -0.93
ABCA4-202ENST00000460514 JDP2Q8WYK2 163 aa9.26□□□□□ -0.93
ABCA4-202ENST00000460514 ZNF512BQ96KM6 892 aaPredicted RBP9.26□□□□□ -0.93
ABCA4-202ENST00000460514 FAM84BQ96KN1 310 aaPredicted RBP9.26□□□□□ -0.93
ABCA4-202ENST00000460514 DBNLQ9UJU6 430 aaKnown RBP9.26□□□□□ -0.93
ABCA4-202ENST00000460514 DUOX1Q9NRD9 1551 aa9.25□□□□□ -0.93
ABCA4-202ENST00000460514 SNAP23O00161 211 aa9.25□□□□□ -0.93
ABCA4-202ENST00000460514 NFKBIEO00221 500 aa9.25□□□□□ -0.93
ABCA4-202ENST00000460514 STK25O00506 426 aa9.25□□□□□ -0.93
ABCA4-202ENST00000460514 YBX3P16989 372 aaKnown RBP eCLIP9.25□□□□□ -0.93
ABCA4-202ENST00000460514 ATP5JP18859 108 aa9.25□□□□□ -0.93
ABCA4-202ENST00000460514 LMNB1P20700 586 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms