RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 HDAC9Q9UKV0 1011 aa26.5■■□□□ 1.83
ABCD4-202ENST00000460308 IQSEC3Q9UPP2 1182 aaPredicted RBP26.5■■□□□ 1.83
ABCD4-202ENST00000460308 ADAMTSL1Q8N6G6 1762 aa26.49■■□□□ 1.83
ABCD4-202ENST00000460308 MMP14P50281 582 aa26.49■■□□□ 1.83
ABCD4-202ENST00000460308 KIAA0825Q8IV33 1275 aa26.49■■□□□ 1.83
ABCD4-202ENST00000460308 RPAP2Q8IXW5 612 aaPredicted RBP26.49■■□□□ 1.83
ABCD4-202ENST00000460308 FAM205AQ6ZU69 1335 aa26.48■■□□□ 1.83
ABCD4-202ENST00000460308 APLP1P51693 650 aa26.48■■□□□ 1.83
ABCD4-202ENST00000460308 FKBP1AP62942 108 aaKnown RBP26.48■■□□□ 1.83
ABCD4-202ENST00000460308 MYOZ2Q9NPC6 264 aa26.48■■□□□ 1.83
ABCD4-202ENST00000460308 GNL3LQ9NVN8 582 aaKnown RBP26.48■■□□□ 1.83
ABCD4-202ENST00000460308 TIMM10P62072 90 aa26.47■■□□□ 1.83
ABCD4-202ENST00000460308 CHAF1AQ13111 956 aaPredicted RBP26.47■■□□□ 1.83
ABCD4-202ENST00000460308 NEUROD6Q96NK8 337 aa26.47■■□□□ 1.83
ABCD4-202ENST00000460308 A0A1B0GUL7 405 aa26.46■■□□□ 1.83
ABCD4-202ENST00000460308 HMMRO75330 724 aa26.46■■□□□ 1.83
ABCD4-202ENST00000460308 EGFRP00533 1210 aa26.46■■□□□ 1.83
ABCD4-202ENST00000460308 PGAP2Q9UHJ9 254 aa26.46■■□□□ 1.83
ABCD4-202ENST00000460308 F8W031 263 aaPredicted RBP26.45■■□□□ 1.82
ABCD4-202ENST00000460308 ITGBL1O95965 494 aaPredicted RBP26.45■■□□□ 1.82
ABCD4-202ENST00000460308 MFSD14BQ5SR56 506 aa26.45■■□□□ 1.82
ABCD4-202ENST00000460308 CERS5Q8N5B7 392 aa26.45■■□□□ 1.82
ABCD4-202ENST00000460308 NOP58Q9Y2X3 529 aaKnown RBP26.45■■□□□ 1.82
ABCD4-202ENST00000460308 TBC1D22AQ8WUA7 517 aa26.44■■□□□ 1.82
ABCD4-202ENST00000460308 DCPSQ96C86 337 aaKnown RBP26.44■■□□□ 1.82
ABCD4-202ENST00000460308 ZNF646O15015 1829 aaPredicted RBP26.44■■□□□ 1.82
ABCD4-202ENST00000460308 ADORA1P30542 326 aa26.43■■□□□ 1.82
ABCD4-202ENST00000460308 SCARF1Q14162 830 aa26.43■■□□□ 1.82
ABCD4-202ENST00000460308 GORABQ5T7V8 394 aa26.43■■□□□ 1.82
ABCD4-202ENST00000460308 HSP90AB4PQ58FF6 505 aa26.42■■□□□ 1.82
ABCD4-202ENST00000460308 CDC37L1Q7L3B6 337 aa26.42■■□□□ 1.82
ABCD4-202ENST00000460308 XAGE2Q96GT9 111 aa26.42■■□□□ 1.82
ABCD4-202ENST00000460308 PASKQ96RG2 1323 aa26.41■■□□□ 1.82
ABCD4-202ENST00000460308 CCDC102BQ68D86 513 aa26.41■■□□□ 1.82
ABCD4-202ENST00000460308 ERC1Q8IUD2 1116 aa26.41■■□□□ 1.82
ABCD4-202ENST00000460308 PHKA1P46020 1223 aa26.4■■□□□ 1.82
ABCD4-202ENST00000460308 WDR66Q8TBY9 1149 aa26.4■■□□□ 1.82
ABCD4-202ENST00000460308 GPR108Q9NPR9 543 aa26.4■■□□□ 1.82
ABCD4-202ENST00000460308 EXOC6BQ9Y2D4 811 aa26.4■■□□□ 1.82
ABCD4-202ENST00000460308 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.4■■□□□ 1.82
ABCD4-202ENST00000460308 POLR2AP24928 1970 aaKnown RBP26.39■■□□□ 1.82
ABCD4-202ENST00000460308 DLGAP5Q15398 846 aa26.39■■□□□ 1.82
ABCD4-202ENST00000460308 USP48Q86UV5 1035 aa26.39■■□□□ 1.82
ABCD4-202ENST00000460308 GLIS2Q9BZE0 524 aaPredicted RBP26.39■■□□□ 1.82
ABCD4-202ENST00000460308 GGA3Q9NZ52 723 aa26.39■■□□□ 1.82
ABCD4-202ENST00000460308 DENND2AQ9ULE3 1009 aa26.39■■□□□ 1.82
ABCD4-202ENST00000460308 TTF2Q9UNY4 1162 aaKnown RBP26.39■■□□□ 1.82
ABCD4-202ENST00000460308 MYH13Q9UKX3 1938 aa26.38■■□□□ 1.81
ABCD4-202ENST00000460308 SEMA3EO15041 775 aa26.38■■□□□ 1.81
ABCD4-202ENST00000460308 RBM5P52756 815 aaKnown RBP eCLIP26.38■■□□□ 1.812e-6■□□□□ 10.6
ABCD4-202ENST00000460308 ANGEL2Q5VTE6 544 aaKnown RBP26.38■■□□□ 1.81
ABCD4-202ENST00000460308 KRT26Q7Z3Y9 468 aa26.38■■□□□ 1.81
ABCD4-202ENST00000460308 TRAF5O00463 557 aa26.37■■□□□ 1.81
ABCD4-202ENST00000460308 WNT10BO00744 389 aa26.37■■□□□ 1.81
ABCD4-202ENST00000460308 NBPF9Q3BBW0 867 aa26.37■■□□□ 1.81
ABCD4-202ENST00000460308 TNNI3KQ59H18 835 aa26.37■■□□□ 1.81
ABCD4-202ENST00000460308 SULF1Q8IWU6 871 aa26.37■■□□□ 1.81
ABCD4-202ENST00000460308 SIRT2Q8IXJ6 389 aa26.37■■□□□ 1.81
ABCD4-202ENST00000460308 FPGT-TNNI3KV9GXZ4 949 aa26.37■■□□□ 1.81
ABCD4-202ENST00000460308 TMEM88BA6NKF7 163 aa26.36■■□□□ 1.81
ABCD4-202ENST00000460308 HTRA3P83110 453 aa26.36■■□□□ 1.81
ABCD4-202ENST00000460308 CFAP100Q494V2 611 aa26.36■■□□□ 1.81
ABCD4-202ENST00000460308 ARAP2Q8WZ64 1704 aa26.36■■□□□ 1.81
ABCD4-202ENST00000460308 ASTN2O75129 1339 aaPredicted RBP26.36■■□□□ 1.81
ABCD4-202ENST00000460308 CREBZFQ9NS37 354 aa26.35■■□□□ 1.81
ABCD4-202ENST00000460308 SUGT1Q9Y2Z0 365 aa26.35■■□□□ 1.81
ABCD4-202ENST00000460308 MYO1BO43795 1136 aa26.34■■□□□ 1.81
ABCD4-202ENST00000460308 FMR1Q06787 632 aaKnown RBP eCLIP26.34■■□□□ 1.81
ABCD4-202ENST00000460308 MTMR14Q8NCE2 650 aa26.34■■□□□ 1.81
ABCD4-202ENST00000460308 CRBNQ96SW2 442 aa26.34■■□□□ 1.81
ABCD4-202ENST00000460308 PITPNM2Q9BZ72 1349 aa26.34■■□□□ 1.81
ABCD4-202ENST00000460308 APBB1O00213 710 aa26.33■■□□□ 1.81
ABCD4-202ENST00000460308 CCDC158Q5M9N0 1113 aa26.33■■□□□ 1.81
ABCD4-202ENST00000460308 ZNF408Q9H9D4 720 aa26.33■■□□□ 1.81
ABCD4-202ENST00000460308 SERPINA10Q9UK55 444 aa26.33■■□□□ 1.81
ABCD4-202ENST00000460308 MAST3O60307 1309 aa26.33■■□□□ 1.81
ABCD4-202ENST00000460308 ZBTB22O15209 634 aa26.32■■□□□ 1.8
ABCD4-202ENST00000460308 RAB11FIP3O75154 756 aa26.32■■□□□ 1.8
ABCD4-202ENST00000460308 GRIK5Q16478 980 aa26.32■■□□□ 1.8
ABCD4-202ENST00000460308 ZGPATQ8N5A5 531 aaKnown RBP26.32■■□□□ 1.8
ABCD4-202ENST00000460308 RHPN1Q8TCX5 695 aa26.32■■□□□ 1.8
ABCD4-202ENST00000460308 ZBED3Q96IU2 234 aaPredicted RBP26.32■■□□□ 1.8
ABCD4-202ENST00000460308 ADM5C9JUS6 153 aa26.31■■□□□ 1.8
ABCD4-202ENST00000460308 CELF2O95319 508 aaKnown RBP26.31■■□□□ 1.8
ABCD4-202ENST00000460308 UQCRFS1P1P0C7P4 283 aa26.31■■□□□ 1.8
ABCD4-202ENST00000460308 RASGRF1Q13972 1273 aa26.31■■□□□ 1.8
ABCD4-202ENST00000460308 TTC39AQ5SRH9 613 aa26.31■■□□□ 1.8
ABCD4-202ENST00000460308 KIF1BPQ96EK5 621 aa26.31■■□□□ 1.8
ABCD4-202ENST00000460308 DBNDD2Q9BQY9 259 aa26.31■■□□□ 1.8
ABCD4-202ENST00000460308 TRPM7Q96QT4 1865 aa26.31■■□□□ 1.8
ABCD4-202ENST00000460308 SPDYE2BA6NHP3 402 aa26.3■■□□□ 1.8
ABCD4-202ENST00000460308 LDHBP07195 334 aaKnown RBP26.3■■□□□ 1.8
ABCD4-202ENST00000460308 SPDYE6P0CI01 402 aa26.3■■□□□ 1.8
ABCD4-202ENST00000460308 CRKP46108 304 aa26.3■■□□□ 1.8
ABCD4-202ENST00000460308 HDLBPQ00341 1268 aaKnown RBP26.3■■□□□ 1.8
ABCD4-202ENST00000460308 TEKT1Q969V4 418 aa26.3■■□□□ 1.8
ABCD4-202ENST00000460308 EAF2Q96CJ1 260 aaPredicted RBP26.3■■□□□ 1.8
ABCD4-202ENST00000460308 PRMT6Q96LA8 375 aaPredicted RBP26.3■■□□□ 1.8
ABCD4-202ENST00000460308 CCDC8Q9H0W5 538 aaPredicted RBP26.3■■□□□ 1.8
ABCD4-202ENST00000460308 SUPT16HQ9Y5B9 1047 aaKnown RBP26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms