RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 FDPSP14324 419 aaKnown RBP21.28■■□□□ 1
HPS3-202ENST00000460120 ZNF165P49910 485 aa21.28■■□□□ 1
HPS3-202ENST00000460120 HMGN5P82970 282 aaKnown RBP21.28■■□□□ 1
HPS3-202ENST00000460120 NRBP1Q9UHY1 535 aa21.28■■□□□ 1
HPS3-202ENST00000460120 PIBF1Q8WXW3 757 aa21.27■■□□□ 1
HPS3-202ENST00000460120 INCENPQ9NQS7 918 aa21.27■■□□□ 1
HPS3-202ENST00000460120 CARMIL3Q8ND23 1372 aa21.27■■□□□ 1
HPS3-202ENST00000460120 ANKRD18BA2A2Z9 1011 aa21.27■□□□□ 0.99
HPS3-202ENST00000460120 ZNF213O14771 459 aa21.27■□□□□ 0.99
HPS3-202ENST00000460120 ILDR1Q86SU0 546 aaPredicted RBP21.27■□□□□ 0.99
HPS3-202ENST00000460120 APPBP2Q92624 585 aa21.27■□□□□ 0.99
HPS3-202ENST00000460120 CTSWP56202 376 aa21.26■□□□□ 0.99
HPS3-202ENST00000460120 VSIG10Q8N0Z9 540 aa21.26■□□□□ 0.99
HPS3-202ENST00000460120 PIH1D3Q9NQM4 214 aaKnown RBP21.26■□□□□ 0.99
HPS3-202ENST00000460120 CTNNA3Q9UI47 895 aa21.26■□□□□ 0.99
HPS3-202ENST00000460120 CSF1RP07333 972 aa21.26■□□□□ 0.99
HPS3-202ENST00000460120 PHKA1P46020 1223 aa21.26■□□□□ 0.99
HPS3-202ENST00000460120 NAA16Q6N069 864 aaPredicted RBP21.26■□□□□ 0.99
HPS3-202ENST00000460120 RIPOR2Q9Y4F9 1068 aa21.26■□□□□ 0.99
HPS3-202ENST00000460120 CPLX1O14810 134 aa21.25■□□□□ 0.99
HPS3-202ENST00000460120 KIF3AQ9Y496 699 aa21.25■□□□□ 0.99
HPS3-202ENST00000460120 UBR2Q8IWV8 1755 aa21.25■□□□□ 0.99
HPS3-202ENST00000460120 ANTXR2P58335 489 aa21.25■□□□□ 0.99
HPS3-202ENST00000460120 C11orf57Q6ZUT1 292 aaPredicted RBP21.25■□□□□ 0.99
HPS3-202ENST00000460120 FSIP1Q8NA03 581 aa21.25■□□□□ 0.99
HPS3-202ENST00000460120 XIRP1Q702N8 1843 aaKnown RBP21.24■□□□□ 0.99
HPS3-202ENST00000460120 LRMPQ12912 555 aa21.24■□□□□ 0.99
HPS3-202ENST00000460120 LRRFIP1Q32MZ4 808 aaKnown RBP21.24■□□□□ 0.99
HPS3-202ENST00000460120 CCDC73Q6ZRK6 1079 aa21.24■□□□□ 0.99
HPS3-202ENST00000460120 ZNF274Q96GC6 653 aaPredicted RBP21.24■□□□□ 0.99
HPS3-202ENST00000460120 AGXT2Q9BYV1 514 aa21.24■□□□□ 0.99
HPS3-202ENST00000460120 CYP19A1P11511 503 aaPredicted RBP21.24■□□□□ 0.99
HPS3-202ENST00000460120 RIC1Q4ADV7 1423 aa21.24■□□□□ 0.99
HPS3-202ENST00000460120 CCDC186Q7Z3E2 898 aa21.24■□□□□ 0.99
HPS3-202ENST00000460120 DZIP3Q86Y13 1208 aaKnown RBP21.24■□□□□ 0.99
HPS3-202ENST00000460120 AIFM3Q96NN9 605 aa21.24■□□□□ 0.99
HPS3-202ENST00000460120 LAMA4Q16363 1823 aa21.23■□□□□ 0.99
HPS3-202ENST00000460120 PLEKHG2Q9H7P9 1386 aa21.23■□□□□ 0.99
HPS3-202ENST00000460120 A0A1B0GVL5 298 aa21.23■□□□□ 0.99
HPS3-202ENST00000460120 ACSBG1Q96GR2 724 aa21.23■□□□□ 0.99
HPS3-202ENST00000460120 C8orf76Q96K31 380 aa21.23■□□□□ 0.99
HPS3-202ENST00000460120 TEX13AQ9BXU3 409 aaPredicted RBP21.23■□□□□ 0.99
HPS3-202ENST00000460120 ORC3Q9UBD5 711 aaPredicted RBP21.23■□□□□ 0.99
HPS3-202ENST00000460120 WWC3Q9ULE0 1092 aa21.23■□□□□ 0.99
HPS3-202ENST00000460120 ZFYP08048 801 aaPredicted RBP21.23■□□□□ 0.99
HPS3-202ENST00000460120 NCOA7Q8NI08 942 aa21.23■□□□□ 0.99
HPS3-202ENST00000460120 CLIC4Q9Y696 253 aa21.23■□□□□ 0.99
HPS3-202ENST00000460120 TOGARAM1Q9Y4F4 1720 aa21.23■□□□□ 0.99
HPS3-202ENST00000460120 SALL1Q9NSC2 1324 aa21.22■□□□□ 0.99
HPS3-202ENST00000460120 TRIM28Q13263 835 aaKnown RBP21.22■□□□□ 0.99
HPS3-202ENST00000460120 SF3A1Q15459 793 aaKnown RBP21.22■□□□□ 0.99
HPS3-202ENST00000460120 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.22■□□□□ 0.99
HPS3-202ENST00000460120 ZNF396Q96N95 335 aaPredicted RBP21.22■□□□□ 0.99
HPS3-202ENST00000460120 ZNF532Q9HCE3 1301 aa21.22■□□□□ 0.99
HPS3-202ENST00000460120 TBC1D10CQ8IV04 446 aa21.22■□□□□ 0.99
HPS3-202ENST00000460120 MB21D2Q8IYB1 491 aaPredicted RBP21.22■□□□□ 0.99
HPS3-202ENST00000460120 MYL10Q9BUA6 226 aa21.22■□□□□ 0.99
HPS3-202ENST00000460120 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.22■□□□□ 0.99
HPS3-202ENST00000460120 SENP2Q9HC62 589 aa21.22■□□□□ 0.99
HPS3-202ENST00000460120 KINO60870 393 aaKnown RBP21.21■□□□□ 0.99
HPS3-202ENST00000460120 CCDC102BQ68D86 513 aa21.21■□□□□ 0.99
HPS3-202ENST00000460120 RCOR1Q9UKL0 485 aa21.21■□□□□ 0.99
HPS3-202ENST00000460120 HPS5Q9UPZ3 1129 aa21.21■□□□□ 0.99
HPS3-202ENST00000460120 UBN2Q6ZU65 1347 aa21.21■□□□□ 0.99
HPS3-202ENST00000460120 RRP9O43818 475 aaKnown RBP21.21■□□□□ 0.99
HPS3-202ENST00000460120 GOLGA6L6A8MZA4 724 aa21.2■□□□□ 0.99
HPS3-202ENST00000460120 NBPF3Q9H094 633 aa21.2■□□□□ 0.99
HPS3-202ENST00000460120 PCDHA7Q9UN72 937 aa21.2■□□□□ 0.99
HPS3-202ENST00000460120 B4E1Z4 1266 aa21.2■□□□□ 0.98
HPS3-202ENST00000460120 CYB5R4Q7L1T6 521 aa21.2■□□□□ 0.98
HPS3-202ENST00000460120 SHANK3Q9BYB0 1731 aa21.2■□□□□ 0.98
HPS3-202ENST00000460120 GOLGA6L19H0YKK7 550 aa21.2■□□□□ 0.98
HPS3-202ENST00000460120 ADD2P35612 726 aa21.2■□□□□ 0.98
HPS3-202ENST00000460120 TRDNQ13061 729 aa21.2■□□□□ 0.98
HPS3-202ENST00000460120 STK38Q15208 465 aa21.2■□□□□ 0.98
HPS3-202ENST00000460120 MICU3Q86XE3 530 aa21.2■□□□□ 0.98
HPS3-202ENST00000460120 PHKBQ93100 1093 aa21.2■□□□□ 0.98
HPS3-202ENST00000460120 PLA2G12BQ9BX93 195 aa21.2■□□□□ 0.98
HPS3-202ENST00000460120 BCL11BQ9C0K0 894 aaPredicted RBP21.2■□□□□ 0.98
HPS3-202ENST00000460120 SEC31BQ9NQW1 1179 aa21.2■□□□□ 0.98
HPS3-202ENST00000460120 EXOC5O00471 708 aa21.19■□□□□ 0.98
HPS3-202ENST00000460120 PDE8BO95263 885 aa21.19■□□□□ 0.98
HPS3-202ENST00000460120 SNW1Q13573 536 aaKnown RBP21.19■□□□□ 0.98
HPS3-202ENST00000460120 IQSEC3Q9UPP2 1182 aaPredicted RBP21.19■□□□□ 0.98
HPS3-202ENST00000460120 KIF28PB7ZC32 967 aa21.19■□□□□ 0.98
HPS3-202ENST00000460120 ZNF75DP51815 510 aa21.19■□□□□ 0.98
HPS3-202ENST00000460120 RBM43Q6ZSC3 357 aaKnown RBP21.19■□□□□ 0.98
HPS3-202ENST00000460120 PAPPAQ13219 1627 aa21.18■□□□□ 0.98
HPS3-202ENST00000460120 SDF4Q9BRK5 362 aa21.18■□□□□ 0.98
HPS3-202ENST00000460120 UBE2Q2LH0YL09 131 aa21.18■□□□□ 0.98
HPS3-202ENST00000460120 ADAMTS2O95450 1211 aa21.18■□□□□ 0.98
HPS3-202ENST00000460120 NFXL1Q6ZNB6 911 aa21.18■□□□□ 0.98
HPS3-202ENST00000460120 TOMM22Q9NS69 142 aa21.18■□□□□ 0.98
HPS3-202ENST00000460120 CLIP2Q9UDT6 1046 aa21.18■□□□□ 0.98
HPS3-202ENST00000460120 BIN1O00499 593 aa21.17■□□□□ 0.98
HPS3-202ENST00000460120 PDE6AP16499 860 aa21.17■□□□□ 0.98
HPS3-202ENST00000460120 NDUFA8P51970 172 aa21.17■□□□□ 0.98
HPS3-202ENST00000460120 CTDSPL2Q05D32 466 aa21.17■□□□□ 0.98
HPS3-202ENST00000460120 ISM2Q6H9L7 571 aa21.17■□□□□ 0.98
HPS3-202ENST00000460120 KIAA1524Q8TCG1 905 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms